Gchil7169.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7169.t1
Unique NameGchil7169.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length499
Homology
BLAST of Gchil7169.t1 vs. uniprot
Match: A0A2V3IDU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDU4_9FLOR)

HSP 1 Score: 474 bits (1219), Expect = 1.240e-160
Identity = 310/500 (62.00%), Postives = 364/500 (72.80%), Query Frame = 0
Query:    2 ESRQSRLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNAGTGTPPPFPRTKQHRAMNSFPYGNGQDHMPMPASQRPFSTTPSGVPFAVPPKSVATAASPYTNGKGESNGGVKRTVSGSVIFNPVKAKPNPSQQENNKVRPIASHLVRKAAPPGSVAKVTSPGGESQGSKGP-ENGTVNGKFWKTVIGVEKGRAILRAAESMQKMRYGVLAAKSAEESKGEKQNILQAKTAPPTTICTNNEEGTVAERNPSPPKKRKSEASSSNSIDGETEETTLHINGHSIPESHVQLLLSSAADISAREEERKRLSGSSSDHVGASKEERNPKSTSPRHAVSRNRPPFLNGKHESSRNRKESSERS--RSSAARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDNSSDCIGENEKHFRCSVCAQAFDRVAVLNRHVANKHPLKSD 498
            E+RQ+RLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNAG  TPPPFPR+KQHRAM ++PYG+G DHM +PA++  +ST+ +G+ FA+PPK+V ++ SPY NGKGESNGGVKRTVSGSV+F+P++ K    +Q        + H   K     S  K        Q + G    G+ NGKFWKTVIG +KGRAIL+AAESMQ+MR+G++ +++ ++S    + + Q  T PPTT     E G   +R+ SP KKRKS+ S  N  + E  ETTLHINGHSIPESHVQLLLSSAADISAREEERKR SGSS++H G   EE+  KS   R    + +P   + K  SSRNRK+ SERS  RSSAARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXX                          SDDN  D I +++KHFRCSVCAQAFDRVA+LNRHVANKHPLKS+
Sbjct:    7 ENRQARLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNAGAATPPPFPRSKQHRAMPAYPYGHGPDHMQIPATET-YSTS-TGIAFAIPPKTVTSSVSPYRNGKGESNGGVKRTVSGSVVFHPIQPKTVAPRQGTTPPPTSSVHTENKEGESVSAQKAVGEKMNGQHATGVGSGGSANGKFWKTVIGGDKGRAILKAAESMQRMRHGMVGSRAMDDSGKTMKGVTQ--TQPPTT-SVKGEAGVDTKRHLSPAKKRKSDNSKDN--EEEAGETTLHINGHSIPESHVQLLLSSAADISAREEERKRSSGSSTEHTGIHMEEKRSKSPPSRAIAPKLKPAVTHTKQVSSRNRKDGSERSTSRSSAARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPAIGSGKSGSRNGNRNSDSRVH-SDDNDEDEIDDSKKHFRCSVCAQAFDRVALLNRHVANKHPLKSE 498          
BLAST of Gchil7169.t1 vs. uniprot
Match: R7Q0F2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0F2_CHOCR)

HSP 1 Score: 278 bits (711), Expect = 4.080e-84
Identity = 236/521 (45.30%), Postives = 297/521 (57.01%), Query Frame = 0
Query:    1 MESRQSRLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNAGTGTPPP-FPRTKQHRAMNSFPYGNG--QDHMPMPASQRPFSTTPSGVPFAVPPKSVATAASPYTNGK---GESNGGVKRTVSGSVIFNPVKAKPNPSQQENNKVRPIASHLVRKAAPPGSVAKVTSPGGESQGSKGPENGTVNGKFWKTVIGVEKGRAILRAAESMQKMRYGVLAAKSAEESKGEKQNILQAKTAPPTTICTNNEEGTVAERNPSPPKKRKSEASSSNSIDGETEETTLHINGHSIPESHVQLLLSSAADISAREEE--------------RKRLSGSSSDHVGASKEERNPKSTSPRHAVSRNRPPFLNGKHESSRNRKESSER--SRSSAARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDN--SSDCIGENEKHFRCSVCAQAFDRVAVLNRHVANKHPLKS 497
            MESRQ+RLDAAIALFRSEASASGYVVEEVRLRLPVPDVDV+PRV+IAQ           FPRTKQHR + S+P      +++ P+    RPF   P+   + +P +     A+   NGK   G +N G KRTVSGSVIF+PV AK NPS Q    +   A++  +K  P  S+  + +  G++      +    +  +WKTVIG E+G+ IL+AAESMQ++R+        E  K    +I +        +    E   VA R  + P+    + +          E T HINGH IPES VQLLLSSA DISAR+++              R R S  S   +    +++  KSTS             NGKH S   R+ +S+R  S SS ARP+KCT+CPSSFDR+GHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXX                          +       D   ++EKHFRCS C  AF+RVA+LNRHVA KHPL++
Sbjct:   16 MESRQARLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVLPRVVIAQXXXXXXXXXXXFPRTKQHRPLYSYPRRTSFQREYPPVQEQNRPF-VNPTKRSYGIPGR-----ANTDHNGKIRQGGANTGFKRTVSGSVIFHPVPAKANPSPQHGTAITQNATNPAQKKGPLSSIPYLPTKDGKTLLQPSDQQ---DRHYWKTVIGGERGKQILQAAESMQRLRHAKTGKIYEEAEKPVAMDISECPEERKADVAMKQERAVVATRGSAQPRTEIYKTTRG--------EGTHHINGHDIPESDVQLLLSSAVDISARKKQAATNIIIKSERESIRDRKSKPSKTILAEVGKQKRVKSTS-----------VSNGKHGS---RRSNSDRRASGSSTARPYKCTKCPSSFDREGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPAVGSGKTCMSSRNNLYSSDSATTKSEIICDDAQDDSEKHFRCSACRMAFNRVALLNRHVAEKHPLQT 505          
The following BLAST results are available for this feature:
BLAST of Gchil7169.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IDU4_9FLOR1.240e-16062.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q0F2_CHOCR4.080e-8445.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 405..428
e-value: 9.3E-4
score: 28.5
coord: 470..493
e-value: 0.026
score: 23.7
coord: 376..399
e-value: 0.1
score: 21.7
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 405..428
e-value: 3.5E-4
score: 20.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 378..399
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 407..428
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 472..493
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 376..404
score: 12.112707
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 405..433
score: 11.322948
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 470..498
score: 9.348555
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 401..436
e-value: 3.6E-9
score: 38.1
coord: 352..400
e-value: 2.3E-7
score: 32.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..338
NoneNo IPR availablePANTHERPTHR24388ZINC FINGER PROTEINcoord: 136..490
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 374..426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:405719..407215 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7169.t1Gchil7169.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 405719..407215 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7169.t1 ID=Gchil7169.t1|Name=Gchil7169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=499bp
MESRQSRLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNN
AGTGTPPPFPRTKQHRAMNSFPYGNGQDHMPMPASQRPFSTTPSGVPFAV
PPKSVATAASPYTNGKGESNGGVKRTVSGSVIFNPVKAKPNPSQQENNKV
RPIASHLVRKAAPPGSVAKVTSPGGESQGSKGPENGTVNGKFWKTVIGVE
KGRAILRAAESMQKMRYGVLAAKSAEESKGEKQNILQAKTAPPTTICTNN
EEGTVAERNPSPPKKRKSEASSSNSIDGETEETTLHINGHSIPESHVQLL
LSSAADISAREEERKRLSGSSSDHVGASKEERNPKSTSPRHAVSRNRPPF
LNGKHESSRNRKESSERSRSSAARPFKCTRCPSSFDRDGHLRVHILAVHE
KKRPFVCQVCDASFGHSSSLLRHVRTVHQASPAIGSGKTGCRNGHRNSDS
RSAKSDDNSSDCIGENEKHFRCSVCAQAFDRVAVLNRHVANKHPLKSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf