Gchil7169.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7169.t1
Unique NameGchil7169.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length499
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:405719..407215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7169Gchil7169Gracilaria chilensis NLEC103_M9 malegenetig00004441_pilon 405719..407215 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7169.t1.stop1Gchil7169.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004441_pilon 405719..405721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7169.t1.CDS1Gchil7169.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004441_pilon 405719..407215 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7169.t1.exon1Gchil7169.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004441_pilon 405719..407215 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7169.t1.start1Gchil7169.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004441_pilon 407213..407215 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7169.t1Gchil7169.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004441_pilon 405719..407215 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7169.t1 ID=Gchil7169.t1|Name=Gchil7169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=499bp
MESRQSRLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNN
AGTGTPPPFPRTKQHRAMNSFPYGNGQDHMPMPASQRPFSTTPSGVPFAV
PPKSVATAASPYTNGKGESNGGVKRTVSGSVIFNPVKAKPNPSQQENNKV
RPIASHLVRKAAPPGSVAKVTSPGGESQGSKGPENGTVNGKFWKTVIGVE
KGRAILRAAESMQKMRYGVLAAKSAEESKGEKQNILQAKTAPPTTICTNN
EEGTVAERNPSPPKKRKSEASSSNSIDGETEETTLHINGHSIPESHVQLL
LSSAADISAREEERKRLSGSSSDHVGASKEERNPKSTSPRHAVSRNRPPF
LNGKHESSRNRKESSERSRSSAARPFKCTRCPSSFDRDGHLRVHILAVHE
KKRPFVCQVCDASFGHSSSLLRHVRTVHQASPAIGSGKTGCRNGHRNSDS
RSAKSDDNSSDCIGENEKHFRCSVCAQAFDRVAVLNRHVANKHPLKSD*
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spliced messenger RNA

>Gchil7169.t1 ID=Gchil7169.t1|Name=Gchil7169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1497bp|location=Sequence derived from alignment at tig00004441_pilon:405719..407215- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGAGCCGACAATCAAGGCTTGACGCAGCGATAGCTCTGTTTCGTTC
TGAGGCCTCAGCTTCAGGCTACGTTGTGGAAGAGGTGCGTTTGCGCCTTC
CTGTTCCGGATGTTGATGTGATGCCAAGAGTTATTATAGCTCAAAACAAT
GCAGGAACAGGCACACCTCCACCGTTTCCAAGAACAAAACAACACCGCGC
CATGAACTCGTTCCCGTACGGAAATGGACAAGACCACATGCCAATGCCTG
CCAGCCAGCGTCCATTTTCAACCACTCCTTCTGGTGTTCCTTTCGCTGTA
CCTCCAAAGTCTGTCGCGACTGCAGCGAGCCCGTACACAAACGGAAAGGG
GGAGTCAAACGGAGGAGTCAAGAGAACCGTATCGGGTTCTGTTATTTTTA
ACCCGGTTAAAGCCAAGCCTAATCCTTCTCAACAAGAAAACAACAAAGTA
CGACCGATTGCATCACATCTTGTGAGGAAAGCAGCGCCGCCGGGCTCAGT
GGCCAAAGTCACAAGCCCAGGAGGGGAAAGTCAAGGCTCGAAGGGACCGG
AGAACGGAACCGTGAACGGAAAGTTTTGGAAGACCGTCATCGGTGTTGAG
AAAGGGAGAGCAATTTTGAGAGCCGCTGAGAGCATGCAAAAGATGAGATA
TGGAGTTCTTGCTGCAAAGTCAGCAGAGGAGTCAAAGGGCGAAAAACAAA
ACATACTACAAGCGAAAACAGCACCTCCCACGACGATATGTACCAATAAT
GAAGAAGGGACAGTGGCTGAAAGAAACCCATCTCCGCCAAAGAAAAGAAA
AAGCGAGGCTAGCTCTTCCAACAGCATTGATGGGGAGACAGAAGAAACAA
CTCTACATATTAACGGTCACAGCATCCCGGAAAGCCACGTTCAACTTCTC
CTCAGCAGTGCGGCTGATATATCCGCCCGAGAAGAGGAACGGAAGAGATT
GTCAGGTTCAAGTTCGGATCATGTCGGTGCTTCCAAGGAAGAGAGAAACC
CAAAAAGCACTTCCCCACGGCACGCTGTTTCACGAAATCGACCACCATTC
TTGAATGGGAAGCACGAGTCGTCGAGGAACAGAAAAGAGAGTTCGGAGCG
GTCGCGGTCGTCGGCTGCACGGCCTTTCAAATGCACCAGATGCCCATCCT
CTTTCGACAGAGACGGGCATCTGCGGGTGCACATCTTGGCCGTTCACGAA
AAGAAACGACCGTTTGTTTGTCAGGTATGCGACGCTTCCTTTGGTCACAG
CTCTTCGTTGCTGAGACATGTGAGGACTGTCCATCAGGCGTCACCGGCTA
TCGGGTCGGGGAAGACAGGTTGCCGTAATGGACACAGAAATTCTGATTCC
AGATCGGCAAAGTCAGATGACAACAGCAGTGATTGTATAGGTGAGAATGA
GAAACACTTTCGGTGCAGCGTATGTGCGCAAGCTTTTGACAGGGTGGCAG
TGTTAAATCGTCACGTGGCCAACAAACATCCGCTGAAGTCAGACTGA
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protein sequence of Gchil7169.t1

>Gchil7169.t1 ID=Gchil7169.t1|Name=Gchil7169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=499bp
MESRQSRLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNN
AGTGTPPPFPRTKQHRAMNSFPYGNGQDHMPMPASQRPFSTTPSGVPFAV
PPKSVATAASPYTNGKGESNGGVKRTVSGSVIFNPVKAKPNPSQQENNKV
RPIASHLVRKAAPPGSVAKVTSPGGESQGSKGPENGTVNGKFWKTVIGVE
KGRAILRAAESMQKMRYGVLAAKSAEESKGEKQNILQAKTAPPTTICTNN
EEGTVAERNPSPPKKRKSEASSSNSIDGETEETTLHINGHSIPESHVQLL
LSSAADISAREEERKRLSGSSSDHVGASKEERNPKSTSPRHAVSRNRPPF
LNGKHESSRNRKESSERSRSSAARPFKCTRCPSSFDRDGHLRVHILAVHE
KKRPFVCQVCDASFGHSSSLLRHVRTVHQASPAIGSGKTGCRNGHRNSDS
RSAKSDDNSSDCIGENEKHFRCSVCAQAFDRVAVLNRHVANKHPLKSD*
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mRNA from alignment at tig00004441_pilon:405719..407215-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7169.t1 ID=Gchil7169.t1|Name=Gchil7169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1497bp|location=Sequence derived from alignment at tig00004441_pilon:405719..407215- (Gracilaria chilensis NLEC103_M9 male)
ATGGAGAGCCGACAATCAAGGCTTGACGCAGCGATAGCTCTGTTTCGTTC
TGAGGCCTCAGCTTCAGGCTACGTTGTGGAAGAGGTGCGTTTGCGCCTTC
CTGTTCCGGATGTTGATGTGATGCCAAGAGTTATTATAGCTCAAAACAAT
GCAGGAACAGGCACACCTCCACCGTTTCCAAGAACAAAACAACACCGCGC
CATGAACTCGTTCCCGTACGGAAATGGACAAGACCACATGCCAATGCCTG
CCAGCCAGCGTCCATTTTCAACCACTCCTTCTGGTGTTCCTTTCGCTGTA
CCTCCAAAGTCTGTCGCGACTGCAGCGAGCCCGTACACAAACGGAAAGGG
GGAGTCAAACGGAGGAGTCAAGAGAACCGTATCGGGTTCTGTTATTTTTA
ACCCGGTTAAAGCCAAGCCTAATCCTTCTCAACAAGAAAACAACAAAGTA
CGACCGATTGCATCACATCTTGTGAGGAAAGCAGCGCCGCCGGGCTCAGT
GGCCAAAGTCACAAGCCCAGGAGGGGAAAGTCAAGGCTCGAAGGGACCGG
AGAACGGAACCGTGAACGGAAAGTTTTGGAAGACCGTCATCGGTGTTGAG
AAAGGGAGAGCAATTTTGAGAGCCGCTGAGAGCATGCAAAAGATGAGATA
TGGAGTTCTTGCTGCAAAGTCAGCAGAGGAGTCAAAGGGCGAAAAACAAA
ACATACTACAAGCGAAAACAGCACCTCCCACGACGATATGTACCAATAAT
GAAGAAGGGACAGTGGCTGAAAGAAACCCATCTCCGCCAAAGAAAAGAAA
AAGCGAGGCTAGCTCTTCCAACAGCATTGATGGGGAGACAGAAGAAACAA
CTCTACATATTAACGGTCACAGCATCCCGGAAAGCCACGTTCAACTTCTC
CTCAGCAGTGCGGCTGATATATCCGCCCGAGAAGAGGAACGGAAGAGATT
GTCAGGTTCAAGTTCGGATCATGTCGGTGCTTCCAAGGAAGAGAGAAACC
CAAAAAGCACTTCCCCACGGCACGCTGTTTCACGAAATCGACCACCATTC
TTGAATGGGAAGCACGAGTCGTCGAGGAACAGAAAAGAGAGTTCGGAGCG
GTCGCGGTCGTCGGCTGCACGGCCTTTCAAATGCACCAGATGCCCATCCT
CTTTCGACAGAGACGGGCATCTGCGGGTGCACATCTTGGCCGTTCACGAA
AAGAAACGACCGTTTGTTTGTCAGGTATGCGACGCTTCCTTTGGTCACAG
CTCTTCGTTGCTGAGACATGTGAGGACTGTCCATCAGGCGTCACCGGCTA
TCGGGTCGGGGAAGACAGGTTGCCGTAATGGACACAGAAATTCTGATTCC
AGATCGGCAAAGTCAGATGACAACAGCAGTGATTGTATAGGTGAGAATGA
GAAACACTTTCGGTGCAGCGTATGTGCGCAAGCTTTTGACAGGGTGGCAG
TGTTAAATCGTCACGTGGCCAACAAACATCCGCTGAAGTCAGACTGA
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Coding sequence (CDS) from alignment at tig00004441_pilon:405719..407215-

>Gchil7169.t1 ID=Gchil7169.t1|Name=Gchil7169.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1497bp|location=Sequence derived from alignment at tig00004441_pilon:405719..407215- (Gracilaria chilensis NLEC103_M9 male)
ATGGAGAGCCGACAATCAAGGCTTGACGCAGCGATAGCTCTGTTTCGTTC
TGAGGCCTCAGCTTCAGGCTACGTTGTGGAAGAGGTGCGTTTGCGCCTTC
CTGTTCCGGATGTTGATGTGATGCCAAGAGTTATTATAGCTCAAAACAAT
GCAGGAACAGGCACACCTCCACCGTTTCCAAGAACAAAACAACACCGCGC
CATGAACTCGTTCCCGTACGGAAATGGACAAGACCACATGCCAATGCCTG
CCAGCCAGCGTCCATTTTCAACCACTCCTTCTGGTGTTCCTTTCGCTGTA
CCTCCAAAGTCTGTCGCGACTGCAGCGAGCCCGTACACAAACGGAAAGGG
GGAGTCAAACGGAGGAGTCAAGAGAACCGTATCGGGTTCTGTTATTTTTA
ACCCGGTTAAAGCCAAGCCTAATCCTTCTCAACAAGAAAACAACAAAGTA
CGACCGATTGCATCACATCTTGTGAGGAAAGCAGCGCCGCCGGGCTCAGT
GGCCAAAGTCACAAGCCCAGGAGGGGAAAGTCAAGGCTCGAAGGGACCGG
AGAACGGAACCGTGAACGGAAAGTTTTGGAAGACCGTCATCGGTGTTGAG
AAAGGGAGAGCAATTTTGAGAGCCGCTGAGAGCATGCAAAAGATGAGATA
TGGAGTTCTTGCTGCAAAGTCAGCAGAGGAGTCAAAGGGCGAAAAACAAA
ACATACTACAAGCGAAAACAGCACCTCCCACGACGATATGTACCAATAAT
GAAGAAGGGACAGTGGCTGAAAGAAACCCATCTCCGCCAAAGAAAAGAAA
AAGCGAGGCTAGCTCTTCCAACAGCATTGATGGGGAGACAGAAGAAACAA
CTCTACATATTAACGGTCACAGCATCCCGGAAAGCCACGTTCAACTTCTC
CTCAGCAGTGCGGCTGATATATCCGCCCGAGAAGAGGAACGGAAGAGATT
GTCAGGTTCAAGTTCGGATCATGTCGGTGCTTCCAAGGAAGAGAGAAACC
CAAAAAGCACTTCCCCACGGCACGCTGTTTCACGAAATCGACCACCATTC
TTGAATGGGAAGCACGAGTCGTCGAGGAACAGAAAAGAGAGTTCGGAGCG
GTCGCGGTCGTCGGCTGCACGGCCTTTCAAATGCACCAGATGCCCATCCT
CTTTCGACAGAGACGGGCATCTGCGGGTGCACATCTTGGCCGTTCACGAA
AAGAAACGACCGTTTGTTTGTCAGGTATGCGACGCTTCCTTTGGTCACAG
CTCTTCGTTGCTGAGACATGTGAGGACTGTCCATCAGGCGTCACCGGCTA
TCGGGTCGGGGAAGACAGGTTGCCGTAATGGACACAGAAATTCTGATTCC
AGATCGGCAAAGTCAGATGACAACAGCAGTGATTGTATAGGTGAGAATGA
GAAACACTTTCGGTGCAGCGTATGTGCGCAAGCTTTTGACAGGGTGGCAG
TGTTAAATCGTCACGTGGCCAACAAACATCCGCTGAAGTCAGACTGA
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