Gchil7116.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7116.t1
Unique NameGchil7116.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length372
Homology
[Close]
BLAST of Gchil7116.t1 vs. uniprot
Match: R7Q3L8_CHOCR (NUFIP1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3L8_CHOCR)

HSP 1 Score: 77.8 bits (190), Expect = 2.260e-13
Identity = 63/174 (36.21%), Postives = 85/174 (48.85%), Query Frame = 0 
Query:  213 LVTSRNVFCRLNAKLPGSSPHEIEAWVAARKANWPSRTNVERKLAAE-------AEKKNETKSKMK-----------EVNSSSGAMAKLED--YSSXXXXXXXXXXXXXXXXXXXXXXXXXXQGGRGKDGLSRRRVETKTPEPKPTLLRMLLEREIRQEQSVLLQAFRYIITKK 366
            +  S+ +  +L A LPG S  EI+ WVAARK NWPSR NV RKLA +       A+ + E K + +           E  SS G + + +    S                           Q GR     S R V T TP  +P+LL+MLL++EI +E++VLLQAFRYII +K
Sbjct:    1 MTMSKEILAKLQASLPGESQAEIDRWVAARKQNWPSRANVARKLAEKKKREQGGAQMRGEAKRRARVADNSLTMLAAEYGSSDGEIDETDKKTQSIKAQPVGKKDTKSVASRQRERGVAKKRQRGRRNGKKSNRNVST-TPR-RPSLLKMLLQKEIHEERNVLLQAFRYIINQK 172
[Close]
BLAST of Gchil7116.t1 vs. uniprot
Match: A0A0B7NGB0_9FUNG (C3H1-type domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NGB0_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 8.230e-6
Identity = 58/183 (31.69%), Postives = 75/183 (40.98%), Query Frame = 0 
Query:  230 SSPHEIEAWVAARKANWPSRTNVERKLAAEAEKK-------------------NETKSKMK-------------EVNSSSGAMAKLEDYSSXXXXXXXXXXXXXXXXXXXXXXXXXXQGG--RGKD-GLSRRRVETKTPEPK-----------PTLLRMLLEREIRQEQSVLLQAFRYIITKK 366
            S+P E+EAW+AARK NWPS+ N+ERK    AEK+                   NE + K K             + NS S  +  LE  +                            G   RG D G S  + E+K  +PK           P LL  LLE+EI QE+SV+LQ  RYI+  K
Sbjct:  176 STPEELEAWIAARKKNWPSKDNIERKQQENAEKEARGELLPGKKRKSDVKNTSNEQRPKKKNKSEQLSLVAAQYDSNSDSDDLMDLEKDAISSKDPSAMGKILLPEDRPKRRCKYFMMGNCKRGDDCGFSHEKSESKPKQPKQPRSAPAIRKKPNLLFKLLEKEIMQEKSVILQCLRYIVDNK 358
The following BLAST results are available for this feature:
BLAST of Gchil7116.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7Q3L8_CHOCR2.260e-1336.21NUFIP1 domain-containing protein n=1 Tax=Chondrus ... [more]
A0A0B7NGB0_9FUNG8.230e-631.69C3H1-type domain-containing protein n=1 Tax=Parasi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 249..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..209
NoneNo IPR availablePANTHERPTHR13309NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1coord: 110..188
coord: 199..367
IPR019496Nuclear fragile X mental retardation-interacting protein 1, conserved domainPFAMPF10453NUFIP1coord: 231..265
e-value: 1.1E-7
score: 31.6
coord: 155..190
e-value: 1.3E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:240279..241394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7116.t1Gchil7116.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 240279..241394 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7116.t1 ID=Gchil7116.t1|Name=Gchil7116.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=372bp
MQNSRPPYLPPPAPPSLPPPPAIAQLLPPVNFYSIPQFPAAAPSFDQFPC
PPQLSQNSFGNVNGHHHPSFQNAAPVHVQHSTQFQPRYTHQRRWNRRQSV
RVQGGNPRGYKLSGNQNASSMEISSKQDDKRKARNGQIPAQDVLTTLDAK
LPGPSPADIEAWVTARKANWPSKANVERKEAAALKRHKAGALDTSSSQPP
QGSRRLDCSQRDLVTSRNVFCRLNAKLPGSSPHEIEAWVAARKANWPSRT
NVERKLAAEAEKKNETKSKMKEVNSSSGAMAKLEDYSSSEEEEEFSNRRQ
KKPTARRGKRTRRRQGGRGKDGLSRRRVETKTPEPKPTLLRMLLEREIRQ
EQSVLLQAFRYIITKKASETA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019496NUFIP1_cons_dom