Gchil7075.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7075.t1
Unique Name	Gchil7075.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	137

Homology

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: A0A2V3IS91_9FLOR (Coatomer subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS91_9FLOR)

HSP 1 Score: 225 bits (573), Expect = 3.690e-66
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 0

Query:    1 MTSALERQCTLLLQPGIQGDDLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            MT+ALERQCTLLLQPG+QGDDL++L+++LETG  E KQEALK AI+MHLSGEP+PGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDS+GKMLPEMILVCNMVRNELVHPNEYTRG ALRF
Sbjct:    1 MTTALERQCTLLLQPGMQGDDLSSLKQQLETGSAEEKQEALKHAIFMHLSGEPVPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSEGKMLPEMILVCNMVRNELVHPNEYTRGNALRF 122

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: R7Q8T5_CHOCR (Coatomer subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8T5_CHOCR)

HSP 1 Score: 198 bits (504), Expect = 1.630e-56
Identity = 95/122 (77.87%), Postives = 106/122 (86.89%), Query Frame = 0

Query:    1 MTSALERQCTLLLQPGIQGDDLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            MTSALERQCTLL+   I  +D + L+K LE+GD E+K EALKRAI M LSGEP+PGMLM+VIR++LPHEDTHLRKLGLYYLEI DKH  DGKMLPEMILVCNM+RNELVHPNEYTRG ALRF
Sbjct:    9 MTSALERQCTLLIHQDIAPEDADELKKHLESGDLESKAEALKRAISMQLSGEPVPGMLMMVIRYILPHEDTHLRKLGLYYLEIVDKHGPDGKMLPEMILVCNMIRNELVHPNEYTRGCALRF 130

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: UPI001E1E0994 (coatomer subunit beta-1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0994)

HSP 1 Score: 170 bits (431), Expect = 1.560e-46
Identity = 83/123 (67.48%), Postives = 102/123 (82.93%), Query Frame = 0

Query:    1 MTSALERQCTLLL-QPGIQGDDLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            M+SALERQCTLL+ Q  +QGD  +NL+  LE+ D + K +ALKR I  HL+G+ +PGMLM+VIR++LPHEDTHLRK+GL +LE+ DKH  DGK+LPEMILVCNMVRN+LVH NEYTRG ALRF
Sbjct:    1 MSSALERQCTLLVHQHNVQGD-ADNLKANLESPDLDIKTDALKRLIVSHLNGDAIPGMLMMVIRYILPHEDTHLRKMGLLFLEVVDKHGPDGKLLPEMILVCNMVRNKLVHANEYTRGCALRF 122

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: A0A1X6NML1_PORUM (Coatomer subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NML1_PORUM)

HSP 1 Score: 163 bits (412), Expect = 6.050e-44
Identity = 79/122 (64.75%), Postives = 95/122 (77.87%), Query Frame = 0

Query:    1 MTSALERQCTLLLQPGIQGDDLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            M+SALERQC+LL+       ++  LR  LE+ D EAK  ALKR I++ L+GEPLPGMLM VIR+VLPHE+THLRK+GLY+LEI D    DG M PEMILVCNMVRNELVH NE++RG +LRF
Sbjct:    1 MSSALERQCSLLINSNAGSGEVAELRTGLESSDVEAKLTALKRVIHLQLTGEPLPGMLMTVIRYVLPHENTHLRKMGLYFLEIVDARGDDGAMRPEMILVCNMVRNELVHANEFSRGCSLRF 122

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: M2XWE9_GALSU (Coatomer subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWE9_GALSU)

HSP 1 Score: 154 bits (389), Expect = 7.530e-41
Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 0

Query:    3 SALERQCTLLLQ-PGIQGDDLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            +ALE+QCTL +       +++  L+K+LE+ D E K +ALKRAI + L+GE LPG+LM VIRF+LPHED HLRKL L YLEI DK    GKMLPEMILVCNM+RNEL HPNEY+RG ALRF
Sbjct:    2 AALEKQCTLSVHYDRSTPNEVGELKKDLESSDVEKKTKALKRAILLQLNGETLPGVLMTVIRFILPHEDNHLRKLCLVYLEIVDKTGPQGKMLPEMILVCNMIRNELTHPNEYSRGCALRF 122

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: A0A5J4Z7Z2_PORPP (Coatomer subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7Z2_PORPP)

HSP 1 Score: 149 bits (377), Expect = 3.160e-39
Identity = 76/136 (55.88%), Postives = 91/136 (66.91%), Query Frame = 0

Query:    3 SALERQCTLLLQPGIQ----------------GDDLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            SALE+QCTLL+   +                 G DL  LRK LE+ D   K + LK+ + +HL+GE +  MLM VIR+VLPHED H+RKLGLY+LE  DK   DG MLPEMILV NM+RN+LVHPNEYTRG ALRF
Sbjct:    6 SALEKQCTLLINVDVASVLGSKGGDKSAVATGGVDLQELRKALESQDMATKMDGLKKILLLHLNGEKMDSMLMSVIRYVLPHEDAHMRKLGLYFLETVDKKGPDGNMLPEMILVVNMIRNDLVHPNEYTRGCALRF 141

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: A0A7S0ZID4_9RHOD (Coatomer subunit beta n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZID4_9RHOD)

HSP 1 Score: 142 bits (357), Expect = 1.570e-36
Identity = 77/140 (55.00%), Postives = 92/140 (65.71%), Query Frame = 0

Query:    1 MTSALERQCTLLLQPGIQ-------GD-----------DLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            M SALE+QCT+L+   I        GD           D++ LR  LE+     K +ALKR + +HL+GE +  MLM VIR+VLPHED HLRKLGLY+LE  DK   DG MLPEMILV NM+RN+LVH NEYTRG ALRF
Sbjct:    1 MASALEKQCTMLINADIASTLSGTIGDGSTKGSSSASLDISALRTGLESKVLGDKMDALKRILLLHLNGEKMDSMLMSVIRYVLPHEDAHLRKLGLYFLETVDKKSPDGSMLPEMILVVNMIRNDLVHANEYTRGCALRF 140

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: R1DV67_EMIHU (Coatomer subunit beta n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DV67_EMIHU)

HSP 1 Score: 130 bits (327), Expect = 1.720e-32
Identity = 69/122 (56.56%), Postives = 86/122 (70.49%), Query Frame = 0

Query:    3 SALERQCTLLLQPGIQGDDLNN--LRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            SA+ER CTLLL  G +    N   +R+ LE  D E KQEA+K  I + L+GEP+P MLM+VIRF++P +D  L+KL L Y E+ DK   DGK+LPEMILVCN +RN+L HPNEY RG  LRF
Sbjct:    2 SAMERNCTLLLH-GKEATPPNEEEIRELLEDKDVEKKQEAMKTLITLQLNGEPMPKMLMVVIRFIVPSDDHKLKKLLLIYWEVIDKTGPDGKLLPEMILVCNNLRNDLSHPNEYIRGCTLRF 122

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: A0A6V7QNX2_ANACO (Adaptin_N domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QNX2_ANACO)

HSP 1 Score: 119 bits (299), Expect = 1.870e-31
Identity = 60/119 (50.42%), Postives = 82/119 (68.91%), Query Frame = 0

Query:    5 LERQCTLLLQPGIQGDDL-NNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            +E+ CTL++        + N +++ LE  D  AK EALKRA+ + L+GE LP + + ++R+VLP ED  ++KL L YLEI DK DS G++LPEMIL+C  +RN L HPNEY RGV LRF
Sbjct:    1 MEKSCTLVIHFDKGSPAMANEIKEALEGNDVAAKIEALKRAVMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIVDKRDSRGRVLPEMILICQNLRNNLQHPNEYIRGVTLRF 119

[Close]

BLAST of Gchil7075.t1 vs. uniprot
Match: A0A7J8MX49_9ROSI (Adaptin_N domain-containing protein n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A7J8MX49_9ROSI)

HSP 1 Score: 115 bits (289), Expect = 4.010e-30
Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 0

Query:    5 LERQCTLLLQ-----PGIQGDDLNNLRKELETGDGEAKQEALKRAIYMHLSGEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILVCNMVRNELVHPNEYTRGVALRF 122
            +E+ CTLL+      P I     N +++ LE  D  AK +A+K+AI + L+GE LP + + ++R+VLP ED  ++KL L YLEI +K D+ G++LPEMIL+C  +RN L HPNEY RGV LRF
Sbjct:    1 MEKSCTLLIHFDKGSPAIA----NEIKEALEGNDVSAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTVQKLLLLYLEIIEKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRF 119

The following BLAST results are available for this feature:

BLAST of Gchil7075.t1 vs. uniprot

BLAST of Gchil7075.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IS91_9FLOR	3.690e-66	87.70	Coatomer subunit beta n=1 Tax=Gracilariopsis chord...	[more]
R7Q8T5_CHOCR	1.630e-56	77.87	Coatomer subunit beta n=1 Tax=Chondrus crispus Tax...	[more]
UPI001E1E0994	1.560e-46	67.48	coatomer subunit beta-1-like n=1 Tax=Mercenaria me...	[more]
A0A1X6NML1_PORUM	6.050e-44	64.75	Coatomer subunit beta n=1 Tax=Porphyra umbilicalis...	[more]
M2XWE9_GALSU	7.530e-41	63.64	Coatomer subunit beta n=1 Tax=Galdieria sulphurari...	[more]
A0A5J4Z7Z2_PORPP	3.160e-39	55.88	Coatomer subunit beta n=1 Tax=Porphyridium purpure...	[more]
A0A7S0ZID4_9RHOD	1.570e-36	55.00	Coatomer subunit beta n=1 Tax=Timspurckia oligopyr...	[more]
R1DV67_EMIHU	1.720e-32	56.56	Coatomer subunit beta n=1 Tax=Emiliania huxleyi Ta...	[more]
A0A6V7QNX2_ANACO	1.870e-31	50.42	Adaptin_N domain-containing protein n=1 Tax=Ananas...	[more]
A0A7J8MX49_9ROSI	4.010e-30	47.97	Adaptin_N domain-containing protein n=3 Tax=Pentap...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 20..122 e-value: 2.4E-17 score: 62.7
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 18..128 e-value: 5.8E-18 score: 66.6
IPR016460	Coatomer beta subunit (COPB1)	PANTHER	PTHR10635	COATOMER SUBUNIT BETA	coord: 6..125
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 18..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000131_pilon	contig	tig00000131_pilon:464298..464794 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7075.t1	Gchil7075.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000131_pilon 464298..464794 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7075.t1 ID=Gchil7075.t1|Name=Gchil7075.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=137bp
MTSALERQCTLLLQPGIQGDDLNNLRKELETGDGEAKQEALKRAIYMHLS
GEPLPGMLMLVIRFVLPHEDTHLRKLGLYYLEIADKHDSDGKMLPEMILV
CNMVRNELVHPNEYTRGVALRFKKRRSSHSHYIREV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR016460	COPB1
IPR016024	ARM-type_fold