Gchil7073.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7073.t1
Unique NameGchil7073.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length562
Homology
[Close]
BLAST of Gchil7073.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 97.4 bits (241), Expect = 1.200e-17
Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 0 
Query:  408 CILRNANYKVRVTMGLRSNSSRLTTAVLDTGAGLNLVHSKLLPFDWQDF-VQARKTPRITDASRRPMDIKGIVPLYIHLERFKIRTWFLVCPSLGADAILGTSFIDRYIKAIYPGLRKVAFYRPPSIPIISSA-----PGPKANLNRAIISEDNESDKVR 561
            C+L++ANY+V +  GL +       AVLDTGAG NL+   +LP  W+ + V      RI DA+ + +  +G+V L + L    +RT   V   L    ILG  FIDR++KAI P  R++       IP++        PG K +  +   S D  S KVR
Sbjct:   25 CVLKSANYRVSIAAGLTTRVMTPIVAVLDTGAGPNLIRESVLPDGWEKYRVHTSWNRRIVDANGKALKFRGVVQLALQLGELVVRTRLAVVSHLSVPCILGCDFIDRHVKAIVPKERRILLNDAKPIPLLPPGQKTIPPGEKDSGEKKP-SSDTPSTKVR 183
[Close]
BLAST of Gchil7073.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 93.6 bits (231), Expect = 1.800e-16
Identity = 55/155 (35.48%), Postives = 78/155 (50.32%), Query Frame = 0 
Query:  408 CILRNANYKVRVTMGLRSNSSRLTTAVLDTGAGLNLVHSKLLPFDWQDF-VQARKTPRITDASRRPMDIKGIVPLYIHLERFKIRTWFLVCPSLGADAILGTSFIDRYIKAIYPGLRKVAFYRPPSIPIISSAPGPKANLNRAIISEDNESDKVR 561
            C L   NYKV  T+G+ +   R  +A+LDTGAG NL+   +LP DW+ + +       I  A  R +  KG + L + L   K++  F+V   L A+ ILG  FIDR ++AI+P  ++V       IPII  +  P          E   S KVR
Sbjct:   21 CSLATRNYKVSATVGVSATVLRPVSAILDTGAGPNLIKETILPEDWERYRIPGPPAFHIVGAGGRRLLQKGNITLTVQLGTIKVQARFIVVDGLAAECILGCQFIDRQVQAIHPKEKRVTLANGSVIPIIHDSGPPVCGRPSTPPKELPPSTKVR 175
[Close]
BLAST of Gchil7073.t1 vs. uniprot
Match: UPI001E1DEA69 (uncharacterized protein LOC123544193 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA69)

HSP 1 Score: 88.6 bits (218), Expect = 6.670e-15
Identity = 49/130 (37.69%), Postives = 74/130 (56.92%), Query Frame = 0 
Query:  409 ILRNANYKVRVTMGLRSNSSRLTTAVLDTGAGLNLVHSKLLPFDWQDFV-QARKTPRITDASRRPMDIKGIVPLYIHLERFKIRTWFLVCPSLGADAILGTSFIDRYIKAIYPGLRKVAFYRPPSIPIIS 537
            + ++ NYK+ V++G  +       AVLDTGAG+NLV   +LP +W+  +      PRIT+AS R M  +G++ LY+ +     R  F V P LG   ILG +FI+ +++ I+P  R+V      SI I S
Sbjct:   56 LFKSHNYKLCVSIGATAAVLYPLQAVLDTGAGINLVRDDVLPENWERMLLPGVALPRITNASGRRMPARGVIILYVQVGNLVKRVRFYVTPGLGVPCILGCTFINLHVRNIHPKERRVDLNEGGSIAITS 185
The following BLAST results are available for this feature:
BLAST of Gchil7073.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001E1D3E381.200e-1735.63uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
UPI001E1DB02D1.800e-1635.48uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
UPI001E1DEA696.670e-1537.69uncharacterized protein LOC123544193 n=1 Tax=Merce... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..400
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 431..511
e-value: 1.94558E-6
score: 44.2496
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 428..514

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:427409..430332 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7073.t1Gchil7073.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 427409..430332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7073.t1 ID=Gchil7073.t1|Name=Gchil7073.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=562bp
MLPEKIFSSYNKQVSKRALHTLFRTKSSYLFFKTPSNTKYFGIRLQEGWK
TWCLVQGIGGHYYGLQTDLDKQELGYSSFPETNAQEEPIPLEKTCPQGLP
TLSGPVSVSSAQPTWNPLLTFDSLRRSLTIWTTPSRESSLRFLILFCTAC
DQNGGHEGAALYLFQFFLTGQARDRVVSKISGTTDLLDSQDLELLRSYPQ
VFHYLSGPFAADDVIMDAHQEVISFKQSSKMTELAFADDLWKKGYRCGNL
FSEGLLKCHFITGLLPGFRTHVRNYHTENPQYSFRRLFIYIEGYGEPYRS
SRSNAYITRAHATLLRKPNQAFLVSSTESDMDSSLHYADSGDVLAGRNGN
PIGKLLEGRREANPSSLSPCLNQVNGQEPRSPSSPNTNHNHWTTQNEPEW
ENSNDPACILRNANYKVRVTMGLRSNSSRLTTAVLDTGAGLNLVHSKLLP
FDWQDFVQARKTPRITDASRRPMDIKGIVPLYIHLERFKIRTWFLVCPSL
GADAILGTSFIDRYIKAIYPGLRKVAFYRPPSIPIISSAPGPKANLNRAI
ISEDNESDKVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf