Gchil7060.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7060.t1
Unique NameGchil7060.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length255
Homology
BLAST of Gchil7060.t1 vs. uniprot
Match: A0A2V3J6K9_9FLOR (G-patch domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K9_9FLOR)

HSP 1 Score: 150 bits (378), Expect = 5.910e-41
Identity = 86/187 (45.99%), Postives = 118/187 (63.10%), Query Frame = 0
Query:   30 LPPSVSTLAFDDRRITSGPGFELLVKSGWQPGQTLGAPSTPPARA----APIPIVVRRGRAGVGALTVPNSHSHSHSLPSDFCVASPLHQRSHRAPRPTHMANMHIFDPLRPRCQFDPTHVVPNLKALNKHEKSCPANPRRTSSPRIIVVPSAAPFTSSPPPARHSVPVPASPTSFGNQFSHLASST 212
            +PPS +TL F   +ITSGPG++LL KSGW PG+ LG+P+TP + A    AP+P+V++RGRAG+GA +         S P      +P+           H+AN HIFDPLRPRCQ+DP HVV NLKAL KH+++CPANP R  +P    + +A  F++      H++P+  +PT   NQFS LA S+
Sbjct:   31 IPPSTTTLTFSHHQITSGPGYDLLRKSGWLPGEPLGSPATPSSPATSHSAPLPLVLKRGRAGLGAAS---------SAPXXXXXPAPI----------KHLANSHIFDPLRPRCQYDPQHVVSNLKALRKHQRTCPANPHRNCNPANAPIHTA--FSAPSTHLAHTLPI--APT-LTNQFSSLADSS 193          
BLAST of Gchil7060.t1 vs. uniprot
Match: R7QSA9_CHOCR (G-patch domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSA9_CHOCR)

HSP 1 Score: 103 bits (256), Expect = 2.380e-22
Identity = 64/141 (45.39%), Postives = 82/141 (58.16%), Query Frame = 0
Query:   29 ALPPSVSTLAFDDRRITSGPGFELLVKSGWQPGQTLGAPSTPPARAAPIPIVVRRGRAGVGAL-TVPNSHSHSHSLPSDFCVASPLHQRSHRAPRPTHMANMHIFDPLRPRCQFDPTHVVPNLKALNKHEKSCPANPRRTS 168
            A  PS   L+FD   IT+G G+ LL+KSGWQPG  L    +PP    P+P+ V+ GR G+GA  TVP S       P D  +  P        P    + ++ + DPLRPRC+FD  HVVP+L+AL KHE +CPANP R S
Sbjct:  131 AASPSTE-LSFDHLAITNGVGYNLLLKSGWQPGSPLS--QSPPLHREPLPLRVKHGRGGLGAYPTVPASD------PVD--IPQPASDSHLNLPLGDPLGSL-LSDPLRPRCRFDDAHVVPSLRALRKHELTCPANPSRGS 259          
The following BLAST results are available for this feature:
BLAST of Gchil7060.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6K9_9FLOR5.910e-4145.99G-patch domain-containing protein n=1 Tax=Gracilar... [more]
R7QSA9_CHOCR2.380e-2245.39G-patch domain-containing protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 43..91
e-value: 4.2E-5
score: 33.0
IPR000467G-patch domainPFAMPF01585G-patchcoord: 45..90
e-value: 1.1E-7
score: 31.6
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 45..93
score: 11.398872
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:322510..323274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7060.t1Gchil7060.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 322510..323274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7060.t1 ID=Gchil7060.t1|Name=Gchil7060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=255bp
MGGTSSRRRKQRNSRPRRPSRSPSPRRSALPPSVSTLAFDDRRITSGPGF
ELLVKSGWQPGQTLGAPSTPPARAAPIPIVVRRGRAGVGALTVPNSHSHS
HSLPSDFCVASPLHQRSHRAPRPTHMANMHIFDPLRPRCQFDPTHVVPNL
KALNKHEKSCPANPRRTSSPRIIVVPSAAPFTSSPPPARHSVPVPASPTS
FGNQFSHLASSTASSSSSSLCSQVDSVLSDLSSLTAENDHPEHVPFVLDH
PHAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom