Gchil6957.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6957.t1
Unique NameGchil6957.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length226
Homology
BLAST of Gchil6957.t1 vs. uniprot
Match: A0A176VGP3_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VGP3_MARPO)

HSP 1 Score: 126 bits (316), Expect = 6.230e-32
Identity = 74/183 (40.44%), Postives = 106/183 (57.92%), Query Frame = 0
Query:   49 EDVGPPL-GDRRVDVFVPQYEVAENRARIGSCCTVVIWNRVQFDYAVSLLSAGLSFRQISKVVKDNRDRLGAAGTIGCVCKGDASKFAPITCVFGLQILDDMM---WHNCAYSLATAVSTNDFGNSHLDVRIRIPGI--GLFPAWEEKIIGLSGDGLSNTTGYNIGLSTGLSKVFIGGKLFGV 225
            +D G  L GDR +DVF PQY + ++ + + SC  V I N +QFDY VSLL+AGLSFRQIS+V+ +NRDRLG A    C+  G+AS F+ I C  GLQI+ D+M   W   A     A    +  ++  ++   +  +   L P W++K+IG S DG  N  G N+G ++ L+    G   + V
Sbjct:    8 DDGGEELRGDRGMDVFEPQYVIEDDGSNVVSCYKVTIANPLQFDYVVSLLAAGLSFRQISRVILENRDRLGCASKTSCLSDGEASCFSRIVCAVGLQIIADVMSKSWAXLAVRRRLAAFRMERLHAFPELYQLLRQVFDALCPMWKDKLIGSSTDGAPNMRGCNVGFTSQLATAVSGPAFYRV 190          
BLAST of Gchil6957.t1 vs. uniprot
Match: A0A176VJ75_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VJ75_MARPO)

HSP 1 Score: 87.4 bits (215), Expect = 1.760e-17
Identity = 63/167 (37.72%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    2 SFFKKRFTVFGRKTVFAKDEAIVEVIMKEFTIQDSNARCDGDSVSDAEDVGPPLGDRRVDVFVPQYEVAENRARIGSCCTVVIWNRVQFDYAVSLLSAGLSFRQISKVVKDNRDRLGAAGTIGCVCKGDASKFAPITCVFGLQILDDMMWHNCAYSLATAVSTNDFG 168
            +FF K+  V G    ++  + IVE+I+++    D N    GD    A              FVP      N +      TV I N++QF+Y + LLS  LSFRQISKVVK NR+ LG A  +GC+  G+AS F+ +TCV GLQ + ++M    A S+  A  +ND G
Sbjct:   22 AFFFKKSEVNG-DVYYSIHKKIVEIIIRDMLF-DENKLISGDIAMKA--------------FVP----VTNESEEIIFYTVHIKNKLQFNYVIELLSTVLSFRQISKVVKSNRENLGTAAKVGCISPGEASNFSRLTCVIGLQAMVEIMRSCWALSIG-ADESNDKG 167          
The following BLAST results are available for this feature:
BLAST of Gchil6957.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A176VGP3_MARPO6.230e-3240.44Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A176VJ75_MARPO1.760e-1737.72Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004398_piloncontigtig00004398_pilon:345855..346636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6957.t1Gchil6957.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004398_pilon 345855..346636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6957.t1 ID=Gchil6957.t1|Name=Gchil6957.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=226bp
MSFFKKRFTVFGRKTVFAKDEAIVEVIMKEFTIQDSNARCDGDSVSDAED
VGPPLGDRRVDVFVPQYEVAENRARIGSCCTVVIWNRVQFDYAVSLLSAG
LSFRQISKVVKDNRDRLGAAGTIGCVCKGDASKFAPITCVFGLQILDDMM
WHNCAYSLATAVSTNDFGNSHLDVRIRIPGIGLFPAWEEKIIGLSGDGLS
NTTGYNIGLSTGLSKVFIGGKLFGV*
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