Gchil6907.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6907.t1
Unique NameGchil6907.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length200
Homology
BLAST of Gchil6907.t1 vs. uniprot
Match: A0A2V3IMK0_9FLOR (30S ribosomal protein S15 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMK0_9FLOR)

HSP 1 Score: 166 bits (421), Expect = 1.930e-48
Identity = 83/130 (63.85%), Postives = 105/130 (80.77%), Query Frame = 0
Query:   71 GESFFTSQPGVMDMIEEDG-DLDVGEIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIRISQKLRNL 199
            G++ F S   + DM EED  +LD  E+   +PPA W NK  I EAQQKFK+HETD+GSPEFQIATLT RI+YLT HLK +PKD+S+ RGLLKMV+TRR+LLKY+K++DP++F +IV+GLNIR+SQKLR L
Sbjct:   98 GDTSFFSASALGDMPEEDDIELDESELEPLDPPAAWTNKQTIIEAQQKFKIHETDTGSPEFQIATLTTRIKYLTNHLKENPKDYSTARGLLKMVSTRRRLLKYVKKEDPKRFDNIVAGLNIRVSQKLRQL 227          
BLAST of Gchil6907.t1 vs. uniprot
Match: R7QKX9_CHOCR (30S ribosomal protein S15 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKX9_CHOCR)

HSP 1 Score: 142 bits (357), Expect = 3.900e-39
Identity = 72/114 (63.16%), Postives = 88/114 (77.19%), Query Frame = 0
Query:   86 EEDGDLDVGEIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIRISQKLRNL 199
            EED D +      P+P   + N   +  AQQKFK HETDSGSPEFQIATLT RI YLT HLK +PKDFSSTRGLL MV+TRR+LLK+LKR+D ++FT I++GLNIR+SQ++R L
Sbjct:   90 EEDEDSEYEPCAPPQP---FINAQNVSAAQQKFKRHETDSGSPEFQIATLTTRIAYLTDHLKKNPKDFSSTRGLLMMVSTRRRLLKFLKREDEQRFTDIIAGLNIRVSQQIREL 200          
BLAST of Gchil6907.t1 vs. uniprot
Match: Q98RM2_GUITH (30S ribosomal protein S15 n=1 Tax=Guillardia theta TaxID=55529 RepID=Q98RM2_GUITH)

HSP 1 Score: 110 bits (275), Expect = 1.010e-27
Identity = 53/100 (53.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:   95 EIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIRISQ 194
            ++ +P+P  Y  NK + QE + K+K+HE D+GSPE+QIA L+ RI Y+T H+K +PKDFSSTRGL+ MV  R++LLKYL+ +D ++F  I   LNIRI Q
Sbjct:   27 QLSSPQP--YINNKNV-QEIRNKYKIHEKDTGSPEYQIAALSARISYMTEHVKKNPKDFSSTRGLISMVNARKRLLKYLRNEDKDRFFKICIALNIRIQQ 123          
BLAST of Gchil6907.t1 vs. uniprot
Match: J7G1Z6_9CRYP (30S ribosomal protein S15 n=2 Tax=Eukaryota TaxID=2759 RepID=J7G1Z6_9CRYP)

HSP 1 Score: 107 bits (267), Expect = 1.750e-26
Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = 0
Query:   95 EIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIRISQKLR 197
            ++  P+P   + N   I+E ++KFK+HE D+GSPE+QIA L+ RI Y+T H+K +PKDFSSTRGL+ MV+ R+KLLKYL+    E+F +I   L IRI + L+
Sbjct:   30 QLSYPQP---YINSKQIKEVREKFKIHEKDTGSPEYQIAALSVRIAYMTSHVKKNPKDFSSTRGLIAMVSARKKLLKYLRSQSKERFLNICLNLKIRIQKDLQ 129          
BLAST of Gchil6907.t1 vs. uniprot
Match: A0A1X6PAT2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAT2_PORUM)

HSP 1 Score: 107 bits (267), Expect = 4.270e-26
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   92 DVGEIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIRISQKLRNL 199
            D  E++  E P   +    I E ++  +++E DSGSPEFQIAT + RIEYLT H K +PKD SSTRGL+ MV+ RR++LKYL + D  +F +I+  L IR+S++LR L
Sbjct:   52 DATEVLELEAPGPVKTAMAIAELRELARLNENDSGSPEFQIATWSARIEYLTTHAKANPKDHSSTRGLVTMVSKRRRMLKYLAKTDKNRFNAILDKLGIRVSKELRAL 159          
BLAST of Gchil6907.t1 vs. uniprot
Match: A0A7C6I5R5_9FIRM (30S ribosomal protein S15 n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7C6I5R5_9FIRM)

HSP 1 Score: 103 bits (258), Expect = 1.220e-25
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 0
Query:  112 QEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIR 191
            QE  +KFKVHETD+GSPE QIA LT+RI +LT HLK H KDF S RGLLKMV  RR LL YLK+++ E++ SIV  LN+R
Sbjct:    8 QEIIEKFKVHETDTGSPEVQIALLTERINHLTEHLKLHKKDFHSRRGLLKMVGQRRGLLNYLKKNNFERYRSIVEQLNLR 87          
BLAST of Gchil6907.t1 vs. uniprot
Match: A9BL88_HEMAN (30S ribosomal protein S15 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL88_HEMAN)

HSP 1 Score: 105 bits (261), Expect = 1.390e-25
Identity = 50/103 (48.54%), Postives = 74/103 (71.84%), Query Frame = 0
Query:   95 EIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIRISQKLR 197
            +I +P+P   + N   I+E ++K+++HE D+GS E+QIA L+ RI Y+T H+K +PKDFSSTRGL+ MV+ R+KLLKYL+    E+F +I   L IRI + L+
Sbjct:   30 QISSPQP---YINSKQIKEVREKYRIHEKDTGSSEYQIAALSVRIAYMTAHIKKNPKDFSSTRGLIAMVSARKKLLKYLRSQSKERFLNICVNLKIRIQKDLQ 129          
BLAST of Gchil6907.t1 vs. uniprot
Match: A0A1Z5K200_FISSO (30S ribosomal protein S15 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K200_FISSO)

HSP 1 Score: 106 bits (264), Expect = 2.920e-25
Identity = 48/105 (45.71%), Postives = 76/105 (72.38%), Query Frame = 0
Query:   87 EDGDLDVGEIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIR 191
            EDGD+   E+I  EPPA+  +   +Q  ++K ++H+ D+GSPE+Q+A +T+RI YLT HL+ HPKDFS+ RGL+ +V  RR+LL YL  +D +++ ++++ L IR
Sbjct:   63 EDGDV---ELINTEPPAWAVSAEKVQALREKHRLHDKDTGSPEYQVAGMTERISYLTSHLQMHPKDFSTRRGLVALVNKRRRLLNYLSTEDVDRYKALIASLGIR 164          
BLAST of Gchil6907.t1 vs. uniprot
Match: A0A7S1XRX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRX6_9STRA)

HSP 1 Score: 105 bits (262), Expect = 9.200e-25
Identity = 57/120 (47.50%), Postives = 70/120 (58.33%), Query Frame = 0
Query:   72 ESFFTSQPGVMDMIEEDGDLDVGEIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIR 191
            E  FT++        +DG  +V +     PP +W NK  I  A +KFK HE D+GS EFQIA L+ RI Y+T H K HPKD  S RGL+ MV  RR+LL YL + DPE    I S L IR
Sbjct:   78 EELFTAEEIAAMEPVDDGKGEVSDA----PPGWWSNKQAINAATEKFKKHEKDTGSAEFQIAKLSARITYMTEHAKRHPKDHHSRRGLITMVNKRRRLLNYLNKTDPEAVERITSELGIR 193          
BLAST of Gchil6907.t1 vs. uniprot
Match: A0A6U3NZ07_9STRA (30S ribosomal protein S15 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NZ07_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.300e-24
Identity = 52/112 (46.43%), Postives = 78/112 (69.64%), Query Frame = 0
Query:   83 DMIEEDGDLD---VGEIITPEPPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHPKDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIR 191
            D I   GDLD    GE      P ++ ++  I+E +++++ HE+D+GSPE+Q+A +T+RI YLT HLK HPKDFS+ RGL+ +V  RR+LL YL R+D +++ +IVS + IR
Sbjct:   62 DFIVSAGDLDDEEAGEDDDLVVPEWYAHQLRIKELREQYRRHESDTGSPEYQVAGMTERISYLTKHLKEHPKDFSTRRGLVALVNKRRRLLNYLFREDIDRYQTIVSSMGIR 173          
The following BLAST results are available for this feature:
BLAST of Gchil6907.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMK0_9FLOR1.930e-4863.8530S ribosomal protein S15 n=1 Tax=Gracilariopsis c... [more]
R7QKX9_CHOCR3.900e-3963.1630S ribosomal protein S15 n=1 Tax=Chondrus crispus... [more]
Q98RM2_GUITH1.010e-2753.0030S ribosomal protein S15 n=1 Tax=Guillardia theta... [more]
J7G1Z6_9CRYP1.750e-2650.4930S ribosomal protein S15 n=2 Tax=Eukaryota TaxID=... [more]
A0A1X6PAT2_PORUM4.270e-2649.07Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7C6I5R5_9FIRM1.220e-2565.0030S ribosomal protein S15 n=1 Tax=Clostridia bacte... [more]
A9BL88_HEMAN1.390e-2548.5430S ribosomal protein S15 n=1 Tax=Hemiselmis ander... [more]
A0A1Z5K200_FISSO2.920e-2545.7130S ribosomal protein S15 n=2 Tax=Fistulifera sola... [more]
A0A7S1XRX6_9STRA9.200e-2547.50Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U3NZ07_9STRA1.300e-2446.4330S ribosomal protein S15 n=1 Tax=Ditylum brightwe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 111..191
e-value: 4.0E-38
score: 142.6
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 112..191
e-value: 1.5E-29
score: 102.1
IPR000589Ribosomal protein S15PROSITEPS00362RIBOSOMAL_S15coord: 142..172
IPR000589Ribosomal protein S15CDDcd00353Ribosomal_S15p_S13ecoord: 111..189
e-value: 2.07667E-32
score: 109.9
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMTIGR00952TIGR00952coord: 113..191
e-value: 2.1E-29
score: 99.6
IPR005290Ribosomal protein S15, bacterial-typePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 106..191
IPR005290Ribosomal protein S15, bacterial-typeHAMAPMF_01343_BRibosomal_S15_Bcoord: 97..192
score: 19.326702
NoneNo IPR availableGENE3D1.10.287.10coord: 104..156
e-value: 1.7E-17
score: 65.2
NoneNo IPR availableGENE3D6.10.250.3130coord: 158..192
e-value: 8.8E-13
score: 49.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availablePANTHERPTHR23321:SF2637S RIBOSOMAL PROTEIN S28, MITOCHONDRIALcoord: 106..191
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 109..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:659270..659869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6907.t1Gchil6907.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 659270..659869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6907.t1 ID=Gchil6907.t1|Name=Gchil6907.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=200bp
MMAEDSPASGEVVADLATDSGEMIVDPPLSSNTTAETLSRRPSDATSTEV
ADAASAPDSAAIGVSDEALGGESFFTSQPGVMDMIEEDGDLDVGEIITPE
PPAYWRNKAIIQEAQQKFKVHETDSGSPEFQIATLTKRIEYLTVHLKTHP
KDFSSTRGLLKMVATRRKLLKYLKRDDPEKFTSIVSGLNIRISQKLRNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR005290Ribosomal_S15_bac-type
IPR009068S15_NS1_RNA-bd