Gchil6890.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
|
Overview
Homology
BLAST of Gchil6890.t1 vs. uniprot
Match: A0A2V3IP00_9FLOR (Two-component response regulator-like APRR1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP00_9FLOR) HSP 1 Score: 242 bits (618), Expect = 6.310e-75 Identity = 172/326 (52.76%), Postives = 210/326 (64.42%), Query Frame = 0
Query: 1 MLSNHAYHNMNRLAIRNNRENERRLLEELERISSDKHRAPALTHSVFSPESFALDCSPILSPLSLD--AHNDAMHLDFDHPQSFQPYTHFDTEPSTVQVDHTGELSHFPTSTWVASSLSSPXXXXXXXXXXXXXXRXXTPLHAXXXXXXXXXXXXXVPDTTANCKRPRSPSSFLLDGDQSPDNHTDHSMHSESEQSHDPTSPRIIQHFGNAQTSPVSIAPQQKHPVRTVQTKASIKPPXXXXSTSVHTCSSDAKKLSSVSSSTVATDADLSRKRRAEAMERFRRKKAVRCYARRVRYQVRKRIATTRPRVNGRFARRVDAVNHAAK 324
MLSN AY++MN LAI NRENERRLLEELERISSDKHR L SV + ESF+ D SP+LS LSLD AH + LD + S + FDT+P++VQVDHTG++ F S W+ S++SS + L+A XXXXXXXXXX KRPRS SS D +Q P+ +D SM S+Q+ DP SPR +Q FGN + + K T+ T A KP ++S T S+ K+ S +++ V+ DA+ SRKRRAEAMERFRRKKAVR YARRVRYQVRKRIATTRPRVNGRFARR+DA+NHAAK
Sbjct: 1 MLSNQAYNSMNCLAINRNRENERRLLEELERISSDKHRPNLLPDSVLNQESFSYD-SPMLSSLSLDTDAHESGLALDLNVTGSTSAFADFDTQPASVQVDHTGKMLDFSASAWLGSTVSSFPGSACVSSTSSSVDKAGGALNACVAXXXXXXXXXXX-XXXXXLKRPRSSSSLSSDAEQIPEQQSDDSMSITSDQNEDPVSPRSVQGFGNTHAPGLFKSQTAKQQGLTIATGALPKPGLTLRASSTKTTPSETKRSSFMTTQAVS-DAESSRKRRAEAMERFRRKKAVRSYARRVRYQVRKRIATTRPRVNGRFARRIDAINHAAK 323
BLAST of Gchil6890.t1 vs. uniprot
Match: R7QS84_CHOCR (CCT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS84_CHOCR) HSP 1 Score: 93.6 bits (231), Expect = 6.610e-18 Identity = 112/329 (34.04%), Postives = 145/329 (44.07%), Query Frame = 0
Query: 42 LTHSVFSPESFALDCSPILSPLSLDAHND--AMHLDF----DHPQSFQPYTHFDTEPSTVQVDHTG-ELSHFPTSTWVA--SSLSSPXXXXXXXXXXXXXXRXXTPLHAXXXXXXXXXXXXXVPDTTANCKRPRSPSSFLLDGDQSPDNHTD-------HSMHSESEQSHDPTSPRIIQHFGNAQTSPVSIAPQQKHP---------------------------VRTVQTKASIKPPXXXXSTSVHTCSSDAKKLSSVSSSTV--ATDADLSRKRRAEAMERFRRKKAVRCYARRVRYQVRKRIATTRPRVNGRFARRVDAVNHAAKS 325
L +S E F L S +SP+S D ++D M LDF D +F P + +QVD G ++ T+T + S LS P +A + T A+ KRPRS S D D DN TD + + +ES + T+ + SP S+ P +K P T Q +S P S+ D +++ + SS V + A LSRKRRAEAMERFRRKKAVRCY RRVRYQ+RKRIATTRPRVNGRFARR DA + AA +
Sbjct: 41 LDNSALYSEEFFLSDSGFVSPISKDDNSDITGMALDFQDTPDTSLTFDPLCAASYD-ERLQVDRNGTKVGEDATATAILPMSLLSDLSGSIGMYASSPIPCPQDAPANAAVFAAAMTAAMI-MERTDASGKRPRSMSPETADEDYLGDNDTDENNMEETYDIITESSSDNSETTFHVSADSSVVGGSPRSVLPTRKTPHEVPSPLARNGRYNQQTSRPTTGRMSLTGTFQRNSSRAPVRRGGSSPRVP---DVQEMKACSSGNVDSSPSAILSRKRRAEAMERFRRKKAVRCYGRRVRYQIRKRIATTRPRVNGRFARRADAESKAAST 364
BLAST of Gchil6890.t1 vs. uniprot
Match: A0A7S3EM42_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EM42_9RHOD) HSP 1 Score: 58.5 bits (140), Expect = 2.020e-6 Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query: 273 RAEAMERFRRKKAVRCYARRVRYQVRKRIATTRPRVNGRFARRVDAVN 320
R EA+ER+RRKKA RC+ +++RYQ RKRIA+ RPRV GRFAR + VN
Sbjct: 164 RQEALERYRRKKANRCFKKKIRYQCRKRIASDRPRVGGRFARIGEKVN 211 The following BLAST results are available for this feature:
BLAST of Gchil6890.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil6890.t1 ID=Gchil6890.t1|Name=Gchil6890.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=328bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|