Gchil6871.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6871.t1
Unique NameGchil6871.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length124
Homology
BLAST of Gchil6871.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 75.1 bits (183), Expect = 2.620e-13
Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLDDPIPTPFKDCGPQDCTETDDLMGKVQSEDPEVKKNEVYLLDWET-VPPNSARPPVNAITPEEKELLPITIEELL 123
            + D+S RLARWRLRL+EYDY++ Y PGIKHQ AD +SR+  D     P+DD +P                   + + E+   ++  V+   WET V P  A      I PEE+++  +T+EE L
Sbjct:  146 LADSSGRLARWRLRLAEYDYEVKYRPGIKHQLADGVSRLRVDGATSEPVDDEVPC---------------FAVQWREEEQNPRQGTVH---WETPVDPGRAEHAFTVI-PEERDVSSVTVEEFL 250          
BLAST of Gchil6871.t1 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR)

HSP 1 Score: 75.1 bits (183), Expect = 2.660e-13
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLDDPIP 54
            + D+S RLARWRLRL+EYDY++ Y PG+KHQ AD  SR+ TDR D  P+DD +P
Sbjct:  349 LADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGESRLRTDREDTEPVDDEVP 402          
BLAST of Gchil6871.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 74.3 bits (181), Expect = 5.020e-13
Identity = 46/124 (37.10%), Postives = 70/124 (56.45%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLDDPIPTPFKDCGPQDCTE-TDDLMGKVQSEDPEVKKNEVYLLDWETVPPNSARPPVNAITPEEKELLPITIEELL 123
            + D+S RLARWRLRL+EY+Y++ Y PG+KHQ AD +SR+ TD  D TP+DD +      C      E +  L+GKV  +  + + +  Y+L               A+TPEE+++  I++   L
Sbjct:  280 LADSSGRLARWRLRLAEYNYEVQYRPGVKHQLADGVSRLRTDGGDTTPVDDEV-----SCFVVQSQEGSASLLGKVHWDLTQDRPDGFYVL---------------AVTPEERDVSSISVANFL 383          
BLAST of Gchil6871.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 73.6 bits (179), Expect = 9.260e-13
Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLDDPIP 54
            + D+S RLARWRLRL+EYDY++ Y PG+KHQ AD +SR+ TD  D  P+DD +P
Sbjct:  215 LADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGVSRLRTDGGDTEPVDDEVP 268          
BLAST of Gchil6871.t1 vs. uniprot
Match: R7QMC5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC5_CHOCR)

HSP 1 Score: 68.6 bits (166), Expect = 5.260e-11
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLDD 51
            + D+S RLARWRLRL+EYDY++ Y PG+KHQ AD +SR+  D  D  P+DD
Sbjct:  430 LADSSGRLARWRLRLAEYDYEVQYRPGVKHQLADGVSRLRIDGGDTEPVDD 480          
BLAST of Gchil6871.t1 vs. uniprot
Match: R7QNI8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNI8_CHOCR)

HSP 1 Score: 60.8 bits (146), Expect = 2.630e-8
Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLDDPIP 54
            + DAS RLARWRLRL+EYD D+ Y  GIK+  ADALSRI +      P+D+ IP
Sbjct:  214 LADASGRLARWRLRLAEYDSDVTYVKGIKNCLADALSRIPSTGGTTVPIDEEIP 267          
BLAST of Gchil6871.t1 vs. uniprot
Match: R7Q3M7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3M7_CHOCR)

HSP 1 Score: 57.4 bits (137), Expect = 3.790e-7
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRI 39
            + DAS RLARWRLRL+E+D+DI Y  GIK+  ADALSRI
Sbjct:  146 LADASGRLARWRLRLAEFDFDITYVKGIKNCLADALSRI 184          
BLAST of Gchil6871.t1 vs. uniprot
Match: S0F3N3_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3N3_CHOCR)

HSP 1 Score: 57.0 bits (136), Expect = 5.400e-7
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRI 39
            + DAS RLARWRLRL+E+D+D+ Y  GIK+  ADALSRI
Sbjct:  146 LADASGRLARWRLRLAEFDFDVTYVKGIKNCLADALSRI 184          
BLAST of Gchil6871.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 57.0 bits (136), Expect = 5.790e-7
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLDDPIP 54
            + DA  RLAR RLRLSEYD+ + +  GIKHQAADAL R+ T   D + L D IP
Sbjct:  236 LADAKGRLARCRLRLSEYDFIVEHRAGIKHQAADALWRLETTGLDTSTLRDEIP 289          
BLAST of Gchil6871.t1 vs. uniprot
Match: A0A023EZA8_TRIIF (Putative ty3/gypsy family of rnase hi in long-term repeat retroelements (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A023EZA8_TRIIF)

HSP 1 Score: 54.3 bits (129), Expect = 8.740e-7
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    3 DASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRII 40
            D SSRLARW+++L+EY+YDI Y PG +H  AD LSR +
Sbjct:   73 DPSSRLARWQMKLTEYEYDIEYKPGRRHMNADTLSRAV 110          
The following BLAST results are available for this feature:
BLAST of Gchil6871.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QJ93_CHOCR2.620e-1337.90Integrase catalytic domain-containing protein n=3 ... [more]
R7QKK5_CHOCR2.660e-1361.11Integrase catalytic domain-containing protein n=1 ... [more]
R7QLF2_CHOCR5.020e-1337.10Integrase catalytic domain-containing protein n=1 ... [more]
R7QN04_CHOCR9.260e-1359.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QMC5_CHOCR5.260e-1158.82Integrase catalytic domain-containing protein n=1 ... [more]
R7QNI8_CHOCR2.630e-857.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q3M7_CHOCR3.790e-769.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
S0F3N3_CHOCR5.400e-766.67Integrase catalytic domain-containing protein n=1 ... [more]
R7QR94_CHOCR5.790e-757.41Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A023EZA8_TRIIF8.740e-760.53Putative ty3/gypsy family of rnase hi in long-term... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:477564..477935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6871.t1Gchil6871.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 477564..477935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6871.t1 ID=Gchil6871.t1|Name=Gchil6871.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=124bp
MTDASSRLARWRLRLSEYDYDIIYGPGIKHQAADALSRIITDRTDDTPLD
DPIPTPFKDCGPQDCTETDDLMGKVQSEDPEVKKNEVYLLDWETVPPNSA
RPPVNAITPEEKELLPITIEELL*
back to top