Gchil6857.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6857.t1
Unique NameGchil6857.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length609
Homology
BLAST of Gchil6857.t1 vs. uniprot
Match: A0A2V3IHA7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHA7_9FLOR)

HSP 1 Score: 484 bits (1247), Expect = 1.890e-161
Identity = 313/633 (49.45%), Postives = 410/633 (64.77%), Query Frame = 0
Query:    1 MVQRPPTYRISPTVFMNTKRPSRASNQKRRRNASITSPVDDDE-NAVQD-DSGTADIQDDLLTDSEKKGLESWSPDAEDDEDVPLEQLLLDXXXXXXXTLVDEELLLNEGFQEDSEDIETSGVFDEEGDDNDDVEXXXXXXXXXXXXXXDEELAAQATGDDFD-DGIPIPATGKRQQRVVQKKRNSTLKDLNDEENVDTSEDVLNSIPDGFEPVFEAGDSESDDSNPDLTALNDENSTDDLDEQSAEDIRNAANILSKSGILGLGLGEERSGTTSAVES----LTSADDGKLEDE---EEYDLEGLFDFEDEQETDEKGN-----DDESEAIDFKDRKQRQADAEFALTSESNFGKVWELNEDTYVTITEPGQAYAYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSADLPVGSKEYIARRSYELLSQFSPAEMFQWTRRHSSPPRAIEDLYPKKKPKPTFLGKQILHLSTPDSSFANDAHNN-QENADFIKERRTA---KIETTDGKERSAYTAQV---SGDNEFPRVASRSK---ECGEHDRTALDRSVEFPCSFKFKIESIGEGFRDYIQQIVEDALCREVEQLTFSVEKEGKLERIEFNVIVRDSKELTDIFEAFHGDERVKRSYG 608
            M QR PTYRIS TV MNTKR  R SN K     S  S + D+  + VQ+ +SG  ++   LL   E + LE WSP A D+ DVP+E LLL        TL DEE+LL+  F EDS D+    VF+E+ +  DD       XXXXXXXXX  ELAAQA+  DFD D IPIP   KR+ R   +    TL D+++++N+D+SEDVL+ + DGFEPVFE GDS  D+ +  LT + DE  T++ DE+SAEDIRNAANILSKSGILG+GLGE  +   S  ++    L+  D   +  E   ++ D E L  FED+ ET+EK        DE E ID         D E+ LT+ES+ G+VWELNEDTYVTITEPG+AY YELDE+DEEDQEMSTVRRGKQGGWSGGLASYP S+DLPVGSKE+IARRSYEL+++ S  +MF+WT+RH + P  I+ LYP ++P+P  LGKQIL LSTP++S +       QEN    +E  T    + E  D +    Y A++    G+   P    + +   +  E DR+A+DRS+ FP  +KFKIE  GEGF + +Q IV++ L R++E L  +VE+ G+ +R+EFN+ + +SKE+TD+F+A   D R+KRSYG
Sbjct:    1 MTQRAPTYRISSTVVMNTKRRPRTSNGKSESEPSRPSAISDENLSGVQEIESGEQEV---LLAGPENEALEGWSPVAADEGDVPIEALLL-GEDEAEETLDDEEILLDGDFDEDSGDLNVEDVFEEDDEAXDDEAEGIDEXXXXXXXXXXXELAAQASSGDFDEDEIPIPGVQKRRVRSSSRSGTVTLDDIDEDDNIDSSEDVLDPLADGFEPVFEVGDSGRDEPSASLTTVKDEQRTEEFDEESAEDIRNAANILSKSGILGIGLGEAETDDISQSQANSVALSDNDSTTVNAELSGDDLDFEKLLSFEDKPETEEKEEVVDKEPDEVEDID------ADYDDEYTLTTESSVGRVWELNEDTYVTITEPGEAYPYELDEEDEEDQEMSTVRRGKQGGWSGGLASYPASSDLPVGSKEWIARRSYELIAESSAVDMFRWTKRHLTAPPLIDGLYPDERPEPVPLGKQILKLSTPETSASVTGTGLFQENLSATEEEGTMAPMRGEAQDDEGLEDYVAEILVEPGNGSGPEDEKKRRGVEDAFEKDRSAMDRSMTFPYVYKFKIEGSGEGFPECVQDIVKNTLGRDIEDLPLAVERSGRYDRVEFNLTLENSKEITDLFDALRTDARIKRSYG 623          
BLAST of Gchil6857.t1 vs. uniprot
Match: R7QM30_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM30_CHOCR)

HSP 1 Score: 249 bits (635), Expect = 9.610e-71
Identity = 171/475 (36.00%), Postives = 252/475 (53.05%), Query Frame = 0
Query:  150 ELAAQATGDDFDDGIPIPATGKRQQRVVQKKRNS---TLKDLNDEENVDTSEDVLNSIPDGFEPVFEAGDSESDDSNPDLTALNDENSTDDLDEQSAEDIRNAANILSKSGILGLGLGEERSGTTSAVESLTS------ADDGKLEDEEEYDLE-GLFDFEDEQETDEKGNDDESEAIDFKDRKQRQADAE------FALTSESNFGKVWELNEDTYVTITEPGQAYAYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSADLPVGSKEYIARRSYELLSQFSPAEMFQWTRRHSSPPRAIEDLYPKKKPKPTFLGKQILHLSTPDSSFANDAHNNQENADFIKERRTAKIETTDGKERSAYTAQVSGDNEFPRVASRSKECGEHDRTALDRSVEFPCSFKFKIESIGEGFRDYIQQIVEDALCREVEQLTFSVEKEGKLERIEFNVIVRDSKELTDIFEAFHGDERVKRSYG 608
            ELAAQA  +D++D IPI    KR  R+    R S      D++D +++  ++++L +I D   P+F+   +  ++  P +  +++E   + +DE+S EDIR+AA+ILS SG+LGLG+   +    S V S         A    L   E+YD E  L D +DE                        AD          LTS+S+ G++WELN+D YVTITEPGQAYAYELDE+      MST+RRGKQGGWSGGLASY ++ D+P GS E++ARR+YEL+++ +  EMFQWTRRH  PP  I+ LYP   P P  + +  L  STPD   +            I    ++ +E   G++R+    +V G +                  ALDR+V FPC +KFK+E  G+   D +    E  L R V      V+  G+ +R+E  V V  ++++T++++    +  VK S+G
Sbjct:  168 ELAAQADAEDYEDDIPIATLSKRGGRISTGSRMSGPLAAVDVDDNDDIXXADEILETIDDDIPPIFDGPAALEEEVRPAIDGVDEELFVE-VDEESEEDIRSAADILSNSGLLGLGVEGGKRADMSEVTSFAMGGVEGPARPPALAQPEQYDDEVALLDVDDEDXXXXXXXXXXXXXXXQSLESYMDADXXXXXXXXIPLTSKSSSGRIWELNDDNYVTITEPGQAYAYELDEEXXXXXXMSTMRRGKQGGWSGGLASY-SARDMPEGSPEWVARRAYELVAESNQVEMFQWTRRHRGPPPIIDKLYPADPPPPPRIPRTRLQFSTPDIDAS------------IVGTDSSSVEDEQGRKRTPAPEKVEGSH------------------ALDRAVNFPCQYKFKVEGSGDDLIDALIADTEKILGRPVPDSAVHVQPAGRYKRVEIMVEVTSARQVTNLYDTLRNNSGVKYSFG 610          
BLAST of Gchil6857.t1 vs. uniprot
Match: A0A1X6NLQ4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLQ4_PORUM)

HSP 1 Score: 92.8 bits (229), Expect = 5.150e-16
Identity = 54/151 (35.76%), Postives = 85/151 (56.29%), Query Frame = 0
Query:  330 EFALTSESNFGKVWELNEDTYVTITEPGQAYAY---ELDEDDEEDQ--------EMSTVRRGKQGGWSGGLASYPTSAD----LPVGSKEYIARRSYELLSQFSPAEMFQWTRRHSSPPRAIEDLYPKKK---PKPTFLGKQILHLSTPDS 462
            EF +T +++FG+VW LN+D YVTITEPG+ +A+   ++   DEED         E    RR      +   +++P +      + VGSKE+ AR +YE  +   P EM++W+R+HS+PP  +E+L+P +    PK   L  +I  +   DS
Sbjct:  301 EFGVTQDTSFGRVWALNDDNYVTITEPGEGFAFGDADVAATDEEDNGGGSNALHEHDATRRATPAWGASTASAWPAAMGGGVAMDVGSKEWAARAAYERCTSAPPVEMYRWSRKHSTPPAGMEELFPYEAAELPKLARLTLEIQEMPMEDS 451          
The following BLAST results are available for this feature:
BLAST of Gchil6857.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IHA7_9FLOR1.890e-16149.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QM30_CHOCR9.610e-7136.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NLQ4_PORUM5.150e-1635.76Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.260coord: 522..605
e-value: 8.8E-8
score: 34.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..245
IPR007454Uncharacterised protein family UPF0250PFAMPF04359DUF493coord: 528..604
e-value: 1.8E-5
score: 25.2
IPR027471YbeD-like domain superfamilySUPERFAMILY117991YbeD/HP0495-likecoord: 524..604

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:432735..434561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6857.t1Gchil6857.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 432735..434561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6857.t1 ID=Gchil6857.t1|Name=Gchil6857.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=609bp
MVQRPPTYRISPTVFMNTKRPSRASNQKRRRNASITSPVDDDENAVQDDS
GTADIQDDLLTDSEKKGLESWSPDAEDDEDVPLEQLLLDDEEEDEETLVD
EELLLNEGFQEDSEDIETSGVFDEEGDDNDDVEDEDEDREQDEVLDEDEE
LAAQATGDDFDDGIPIPATGKRQQRVVQKKRNSTLKDLNDEENVDTSEDV
LNSIPDGFEPVFEAGDSESDDSNPDLTALNDENSTDDLDEQSAEDIRNAA
NILSKSGILGLGLGEERSGTTSAVESLTSADDGKLEDEEEYDLEGLFDFE
DEQETDEKGNDDESEAIDFKDRKQRQADAEFALTSESNFGKVWELNEDTY
VTITEPGQAYAYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSADLPV
GSKEYIARRSYELLSQFSPAEMFQWTRRHSSPPRAIEDLYPKKKPKPTFL
GKQILHLSTPDSSFANDAHNNQENADFIKERRTAKIETTDGKERSAYTAQ
VSGDNEFPRVASRSKECGEHDRTALDRSVEFPCSFKFKIESIGEGFRDYI
QQIVEDALCREVEQLTFSVEKEGKLERIEFNVIVRDSKELTDIFEAFHGD
ERVKRSYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007454UPF0250
IPR027471YbeD-like_sf