Gchil6857.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil6857.t1
Unique NameGchil6857.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length609
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:432735..434561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6857Gchil6857Gracilaria chilensis NLEC103_M9 malegenetig00004376_pilon 432735..434561 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6857.t1.stop1Gchil6857.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004376_pilon 432735..432737 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6857.t1.CDS1Gchil6857.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004376_pilon 432735..434561 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6857.t1.exon1Gchil6857.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004376_pilon 432735..434561 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6857.t1.start1Gchil6857.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004376_pilon 434559..434561 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6857.t1Gchil6857.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004376_pilon 432735..434561 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil6857.t1 ID=Gchil6857.t1|Name=Gchil6857.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=609bp
MVQRPPTYRISPTVFMNTKRPSRASNQKRRRNASITSPVDDDENAVQDDS
GTADIQDDLLTDSEKKGLESWSPDAEDDEDVPLEQLLLDDEEEDEETLVD
EELLLNEGFQEDSEDIETSGVFDEEGDDNDDVEDEDEDREQDEVLDEDEE
LAAQATGDDFDDGIPIPATGKRQQRVVQKKRNSTLKDLNDEENVDTSEDV
LNSIPDGFEPVFEAGDSESDDSNPDLTALNDENSTDDLDEQSAEDIRNAA
NILSKSGILGLGLGEERSGTTSAVESLTSADDGKLEDEEEYDLEGLFDFE
DEQETDEKGNDDESEAIDFKDRKQRQADAEFALTSESNFGKVWELNEDTY
VTITEPGQAYAYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSADLPV
GSKEYIARRSYELLSQFSPAEMFQWTRRHSSPPRAIEDLYPKKKPKPTFL
GKQILHLSTPDSSFANDAHNNQENADFIKERRTAKIETTDGKERSAYTAQ
VSGDNEFPRVASRSKECGEHDRTALDRSVEFPCSFKFKIESIGEGFRDYI
QQIVEDALCREVEQLTFSVEKEGKLERIEFNVIVRDSKELTDIFEAFHGD
ERVKRSYG*
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spliced messenger RNA

>Gchil6857.t1 ID=Gchil6857.t1|Name=Gchil6857.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1827bp|location=Sequence derived from alignment at tig00004376_pilon:432735..434561- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCCAGCGGCCGCCTACATACCGGATATCCCCCACAGTTTTTATGAA
CACTAAGCGCCCATCAAGAGCTTCAAATCAAAAGCGCAGGCGCAATGCAT
CAATTACGTCACCAGTTGATGATGACGAGAATGCAGTTCAGGACGATTCT
GGCACGGCGGATATACAGGATGACCTTTTAACAGATTCGGAAAAAAAGGG
CTTGGAGAGCTGGTCTCCTGATGCTGAGGATGACGAAGACGTACCTCTAG
AACAATTACTCCTTGACGATGAAGAGGAAGATGAAGAAACATTAGTGGAC
GAAGAACTTTTACTGAATGAAGGGTTCCAAGAAGACTCTGAAGACATTGA
AACGAGCGGCGTCTTTGATGAAGAAGGTGATGACAACGATGATGTCGAAG
ACGAAGACGAAGACCGTGAACAAGATGAGGTCCTCGACGAAGATGAAGAA
CTCGCTGCTCAAGCTACCGGTGACGATTTTGATGATGGAATTCCAATTCC
AGCTACAGGGAAACGACAACAACGCGTCGTACAAAAAAAAAGGAACTCTA
CGTTGAAAGATTTAAATGATGAGGAAAATGTGGACACTTCAGAAGATGTT
CTAAACTCTATCCCAGATGGGTTTGAACCCGTTTTCGAGGCCGGAGACTC
TGAAAGCGATGACTCAAACCCAGACCTAACAGCTTTAAATGACGAGAACT
CAACAGATGACTTAGATGAACAAAGCGCAGAAGACATTAGAAACGCGGCT
AACATCTTGTCTAAAAGCGGTATCCTCGGACTTGGCTTGGGAGAGGAGAG
GAGTGGTACCACGTCAGCTGTCGAGAGCTTGACTTCTGCTGATGATGGGA
AGTTAGAGGATGAAGAAGAATATGATTTGGAAGGATTATTTGACTTTGAA
GATGAACAAGAGACTGATGAAAAAGGAAACGATGATGAGTCAGAAGCAAT
TGATTTTAAGGATCGGAAACAACGACAGGCGGACGCAGAGTTCGCTTTGA
CATCTGAGTCAAATTTTGGAAAAGTATGGGAACTAAATGAGGATACGTAT
GTCACTATTACAGAGCCAGGGCAAGCCTATGCATATGAATTAGATGAGGA
TGACGAAGAAGATCAGGAAATGTCGACTGTAAGAAGGGGAAAACAAGGTG
GGTGGAGCGGAGGGCTAGCATCATATCCCACTTCTGCAGATTTGCCGGTG
GGGTCTAAGGAATACATTGCACGCCGTTCCTACGAATTGCTTTCCCAATT
TTCTCCGGCTGAAATGTTTCAATGGACTCGACGACATTCGTCCCCCCCTC
GAGCAATAGAAGACCTCTATCCGAAAAAGAAACCTAAGCCGACTTTTCTT
GGAAAACAAATTTTACATCTATCAACTCCAGACTCTTCGTTTGCGAATGA
CGCACATAATAATCAAGAAAACGCAGACTTCATCAAGGAGAGAAGAACTG
CAAAGATAGAAACGACAGACGGGAAGGAGCGTAGCGCTTATACTGCCCAA
GTTTCCGGGGATAACGAGTTTCCTCGTGTAGCATCCCGGAGTAAAGAATG
TGGCGAACACGATAGGACCGCTTTGGACAGGTCAGTGGAGTTTCCGTGTT
CGTTTAAGTTTAAGATCGAAAGCATTGGGGAAGGGTTTCGGGATTACATA
CAACAAATTGTGGAGGACGCGTTGTGTAGGGAAGTGGAACAACTCACCTT
TTCAGTAGAGAAAGAGGGGAAACTCGAAAGAATTGAATTTAACGTTATTG
TTAGGGACTCGAAAGAACTCACTGACATTTTCGAAGCTTTTCATGGCGAT
GAACGCGTAAAACGTAGCTATGGATAG
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protein sequence of Gchil6857.t1

>Gchil6857.t1 ID=Gchil6857.t1|Name=Gchil6857.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=609bp
MVQRPPTYRISPTVFMNTKRPSRASNQKRRRNASITSPVDDDENAVQDDS
GTADIQDDLLTDSEKKGLESWSPDAEDDEDVPLEQLLLDDEEEDEETLVD
EELLLNEGFQEDSEDIETSGVFDEEGDDNDDVEDEDEDREQDEVLDEDEE
LAAQATGDDFDDGIPIPATGKRQQRVVQKKRNSTLKDLNDEENVDTSEDV
LNSIPDGFEPVFEAGDSESDDSNPDLTALNDENSTDDLDEQSAEDIRNAA
NILSKSGILGLGLGEERSGTTSAVESLTSADDGKLEDEEEYDLEGLFDFE
DEQETDEKGNDDESEAIDFKDRKQRQADAEFALTSESNFGKVWELNEDTY
VTITEPGQAYAYELDEDDEEDQEMSTVRRGKQGGWSGGLASYPTSADLPV
GSKEYIARRSYELLSQFSPAEMFQWTRRHSSPPRAIEDLYPKKKPKPTFL
GKQILHLSTPDSSFANDAHNNQENADFIKERRTAKIETTDGKERSAYTAQ
VSGDNEFPRVASRSKECGEHDRTALDRSVEFPCSFKFKIESIGEGFRDYI
QQIVEDALCREVEQLTFSVEKEGKLERIEFNVIVRDSKELTDIFEAFHGD
ERVKRSYG*
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mRNA from alignment at tig00004376_pilon:432735..434561-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil6857.t1 ID=Gchil6857.t1|Name=Gchil6857.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1827bp|location=Sequence derived from alignment at tig00004376_pilon:432735..434561- (Gracilaria chilensis NLEC103_M9 male)
ATGGTCCAGCGGCCGCCTACATACCGGATATCCCCCACAGTTTTTATGAA
CACTAAGCGCCCATCAAGAGCTTCAAATCAAAAGCGCAGGCGCAATGCAT
CAATTACGTCACCAGTTGATGATGACGAGAATGCAGTTCAGGACGATTCT
GGCACGGCGGATATACAGGATGACCTTTTAACAGATTCGGAAAAAAAGGG
CTTGGAGAGCTGGTCTCCTGATGCTGAGGATGACGAAGACGTACCTCTAG
AACAATTACTCCTTGACGATGAAGAGGAAGATGAAGAAACATTAGTGGAC
GAAGAACTTTTACTGAATGAAGGGTTCCAAGAAGACTCTGAAGACATTGA
AACGAGCGGCGTCTTTGATGAAGAAGGTGATGACAACGATGATGTCGAAG
ACGAAGACGAAGACCGTGAACAAGATGAGGTCCTCGACGAAGATGAAGAA
CTCGCTGCTCAAGCTACCGGTGACGATTTTGATGATGGAATTCCAATTCC
AGCTACAGGGAAACGACAACAACGCGTCGTACAAAAAAAAAGGAACTCTA
CGTTGAAAGATTTAAATGATGAGGAAAATGTGGACACTTCAGAAGATGTT
CTAAACTCTATCCCAGATGGGTTTGAACCCGTTTTCGAGGCCGGAGACTC
TGAAAGCGATGACTCAAACCCAGACCTAACAGCTTTAAATGACGAGAACT
CAACAGATGACTTAGATGAACAAAGCGCAGAAGACATTAGAAACGCGGCT
AACATCTTGTCTAAAAGCGGTATCCTCGGACTTGGCTTGGGAGAGGAGAG
GAGTGGTACCACGTCAGCTGTCGAGAGCTTGACTTCTGCTGATGATGGGA
AGTTAGAGGATGAAGAAGAATATGATTTGGAAGGATTATTTGACTTTGAA
GATGAACAAGAGACTGATGAAAAAGGAAACGATGATGAGTCAGAAGCAAT
TGATTTTAAGGATCGGAAACAACGACAGGCGGACGCAGAGTTCGCTTTGA
CATCTGAGTCAAATTTTGGAAAAGTATGGGAACTAAATGAGGATACGTAT
GTCACTATTACAGAGCCAGGGCAAGCCTATGCATATGAATTAGATGAGGA
TGACGAAGAAGATCAGGAAATGTCGACTGTAAGAAGGGGAAAACAAGGTG
GGTGGAGCGGAGGGCTAGCATCATATCCCACTTCTGCAGATTTGCCGGTG
GGGTCTAAGGAATACATTGCACGCCGTTCCTACGAATTGCTTTCCCAATT
TTCTCCGGCTGAAATGTTTCAATGGACTCGACGACATTCGTCCCCCCCTC
GAGCAATAGAAGACCTCTATCCGAAAAAGAAACCTAAGCCGACTTTTCTT
GGAAAACAAATTTTACATCTATCAACTCCAGACTCTTCGTTTGCGAATGA
CGCACATAATAATCAAGAAAACGCAGACTTCATCAAGGAGAGAAGAACTG
CAAAGATAGAAACGACAGACGGGAAGGAGCGTAGCGCTTATACTGCCCAA
GTTTCCGGGGATAACGAGTTTCCTCGTGTAGCATCCCGGAGTAAAGAATG
TGGCGAACACGATAGGACCGCTTTGGACAGGTCAGTGGAGTTTCCGTGTT
CGTTTAAGTTTAAGATCGAAAGCATTGGGGAAGGGTTTCGGGATTACATA
CAACAAATTGTGGAGGACGCGTTGTGTAGGGAAGTGGAACAACTCACCTT
TTCAGTAGAGAAAGAGGGGAAACTCGAAAGAATTGAATTTAACGTTATTG
TTAGGGACTCGAAAGAACTCACTGACATTTTCGAAGCTTTTCATGGCGAT
GAACGCGTAAAACGTAGCTATGGATAG
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Coding sequence (CDS) from alignment at tig00004376_pilon:432735..434561-

>Gchil6857.t1 ID=Gchil6857.t1|Name=Gchil6857.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1827bp|location=Sequence derived from alignment at tig00004376_pilon:432735..434561- (Gracilaria chilensis NLEC103_M9 male)
ATGGTCCAGCGGCCGCCTACATACCGGATATCCCCCACAGTTTTTATGAA
CACTAAGCGCCCATCAAGAGCTTCAAATCAAAAGCGCAGGCGCAATGCAT
CAATTACGTCACCAGTTGATGATGACGAGAATGCAGTTCAGGACGATTCT
GGCACGGCGGATATACAGGATGACCTTTTAACAGATTCGGAAAAAAAGGG
CTTGGAGAGCTGGTCTCCTGATGCTGAGGATGACGAAGACGTACCTCTAG
AACAATTACTCCTTGACGATGAAGAGGAAGATGAAGAAACATTAGTGGAC
GAAGAACTTTTACTGAATGAAGGGTTCCAAGAAGACTCTGAAGACATTGA
AACGAGCGGCGTCTTTGATGAAGAAGGTGATGACAACGATGATGTCGAAG
ACGAAGACGAAGACCGTGAACAAGATGAGGTCCTCGACGAAGATGAAGAA
CTCGCTGCTCAAGCTACCGGTGACGATTTTGATGATGGAATTCCAATTCC
AGCTACAGGGAAACGACAACAACGCGTCGTACAAAAAAAAAGGAACTCTA
CGTTGAAAGATTTAAATGATGAGGAAAATGTGGACACTTCAGAAGATGTT
CTAAACTCTATCCCAGATGGGTTTGAACCCGTTTTCGAGGCCGGAGACTC
TGAAAGCGATGACTCAAACCCAGACCTAACAGCTTTAAATGACGAGAACT
CAACAGATGACTTAGATGAACAAAGCGCAGAAGACATTAGAAACGCGGCT
AACATCTTGTCTAAAAGCGGTATCCTCGGACTTGGCTTGGGAGAGGAGAG
GAGTGGTACCACGTCAGCTGTCGAGAGCTTGACTTCTGCTGATGATGGGA
AGTTAGAGGATGAAGAAGAATATGATTTGGAAGGATTATTTGACTTTGAA
GATGAACAAGAGACTGATGAAAAAGGAAACGATGATGAGTCAGAAGCAAT
TGATTTTAAGGATCGGAAACAACGACAGGCGGACGCAGAGTTCGCTTTGA
CATCTGAGTCAAATTTTGGAAAAGTATGGGAACTAAATGAGGATACGTAT
GTCACTATTACAGAGCCAGGGCAAGCCTATGCATATGAATTAGATGAGGA
TGACGAAGAAGATCAGGAAATGTCGACTGTAAGAAGGGGAAAACAAGGTG
GGTGGAGCGGAGGGCTAGCATCATATCCCACTTCTGCAGATTTGCCGGTG
GGGTCTAAGGAATACATTGCACGCCGTTCCTACGAATTGCTTTCCCAATT
TTCTCCGGCTGAAATGTTTCAATGGACTCGACGACATTCGTCCCCCCCTC
GAGCAATAGAAGACCTCTATCCGAAAAAGAAACCTAAGCCGACTTTTCTT
GGAAAACAAATTTTACATCTATCAACTCCAGACTCTTCGTTTGCGAATGA
CGCACATAATAATCAAGAAAACGCAGACTTCATCAAGGAGAGAAGAACTG
CAAAGATAGAAACGACAGACGGGAAGGAGCGTAGCGCTTATACTGCCCAA
GTTTCCGGGGATAACGAGTTTCCTCGTGTAGCATCCCGGAGTAAAGAATG
TGGCGAACACGATAGGACCGCTTTGGACAGGTCAGTGGAGTTTCCGTGTT
CGTTTAAGTTTAAGATCGAAAGCATTGGGGAAGGGTTTCGGGATTACATA
CAACAAATTGTGGAGGACGCGTTGTGTAGGGAAGTGGAACAACTCACCTT
TTCAGTAGAGAAAGAGGGGAAACTCGAAAGAATTGAATTTAACGTTATTG
TTAGGGACTCGAAAGAACTCACTGACATTTTCGAAGCTTTTCATGGCGAT
GAACGCGTAAAACGTAGCTATGGATAG
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