Gchil6835.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6835.t2
Unique NameGchil6835.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length247
Homology
BLAST of Gchil6835.t2 vs. uniprot
Match: A0A2V3IXJ8_9FLOR (DNA replication complex GINS protein SLD5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ8_9FLOR)

HSP 1 Score: 301 bits (771), Expect = 1.910e-100
Identity = 154/248 (62.10%), Postives = 190/248 (76.61%), Query Frame = 0
Query:    1 MSSYSDHGDEIPRFSFGSMALSQEQA--GHTQTRLPNALEGENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHDSGPNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL 246
            MSS S H ++ PRFSFG+MALS+E +     Q+RL N    ++     LNEA+D M MLARNEQ+SP +LP + QT+ VI++L+ QQ D+VD ED+   N S+ESQLKRLE+DRINY LRHY+RVRI KIE NI FI KN+     LS+AE +YA+ Y+ L++DHF KSFLSMLP KIQV+E DGSVDH +GPNLDRFVFCRVR++VGRIA+GED  SDA+NL   DILCVRY  I+ELL+ EDVELL
Sbjct:    1 MSSDSQHDNDTPRFSFGAMALSEEPSRLARAQSRLQNVASIDDAPNTSLNEAVDIMRMLARNEQYSPELLPFQTQTVSVIRSLVSQQLDIVDQEDELEENTSIESQLKRLELDRINYLLRHYYRVRIAKIENNIFFISKNAEASELLSDAEEKYAADYKRLIDDHFSKSFLSMLPQKIQVLEVDGSVDHAAGPNLDRFVFCRVRNDVGRIALGEDEGSDALNLGHGDILCVRYKGIAELLKGEDVELL 248          
BLAST of Gchil6835.t2 vs. uniprot
Match: R7Q402_CHOCR (DNA replication complex GINS protein SLD5 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q402_CHOCR)

HSP 1 Score: 254 bits (650), Expect = 4.200e-82
Identity = 130/245 (53.06%), Postives = 185/245 (75.51%), Query Frame = 0
Query:    5 SDHGDEIPRFSFGSMALSQEQAGHTQTRLPNALEGENPSQPG--LNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNAN-VSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHDSGPNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL 246
            S + D+ PRFSFGSMAL++E  G     + + L   +P Q G  LNE +D++  +A NE F P ILP E +TIQ + + +KQQ++LV++E+D + + +S ESQLKR+EIDRINY LRHY+R+RIKKIE ++LFIFK+ +    LS+ E  +A+GY +L+E+HFKKSFLSMLP K+QV++KDG+VDH +GPNL +FVFC+V+++VG  AVGE++  + ++LNQ DILC+RY SI +LL   DV+L+
Sbjct:    3 STNNDDQPRFSFGSMALTEEP-GRGPLAIDSHLSHLDPDQLGGQLNETLDKLRTVAVNEYFCPEILPFETETIQAMSSEVKQQTELVEEEEDESVDALSFESQLKRMEIDRINYLLRHYYRMRIKKIEGSVLFIFKDLNTFELLSKHEQNFATGYMDLVEEHFKKSFLSMLPKKVQVLDKDGNVDHATGPNLHKFVFCKVKNSVGSYAVGEEAGDETLDLNQGDILCIRYKSIQQLLMKGDVDLI 246          
BLAST of Gchil6835.t2 vs. uniprot
Match: A0A0L0D2U3_THETB (DNA replication complex GINS protein SLD5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2U3_THETB)

HSP 1 Score: 108 bits (270), Expect = 2.360e-25
Identity = 65/200 (32.50%), Postives = 111/200 (55.50%), Query Frame = 0
Query:   48 NEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQ-VIEKDGSVDHDSGPNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL 246
            N  I+ +     NE+FSP +L  E   +  +   +K+Q D+V  E D  A  +  ++LK+LE++R+ Y LR Y+R R++KIE+  ++I KN  +   LS AE  Y   Y +L+ +H  +SFL+ LP K++ +  +D   D    PN D  VFC+V   +G   + +DS+ D   L + ++  + +  I +LL  + + L+
Sbjct:   22 NNDIEALKQAWLNEKFSPHVLIFEDALVARVSEDVKEQEDVVAGELDDGA--TFMTRLKQLELERVKYLLRSYYRTRLRKIEKFCMYILKNPVVRTRLSPAELEYTQRYVDLMAEHLNESFLNGLPEKLRDLTTQDAEDDMIPAPNFDTHVFCKVVDTIGTFQLDQDSSVD---LEEGELYLLPFKPIRDLLLDQSIILI 216          
BLAST of Gchil6835.t2 vs. uniprot
Match: A0A024GPQ5_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GPQ5_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.930e-25
Identity = 65/212 (30.66%), Postives = 114/212 (53.77%), Query Frame = 0
Query:   39 GENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLE----SQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHDSGPNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL 246
            G+  +   +NE +++M+ L RNE  +P +L +    +  +   IK Q + +D   D    ++ E    ++L ++EIDR+ Y L  Y R R+KKIE+   +I K  + L+ LSE E  YA  +  L+  H   + LS +P + Q ++ +G     S PNLD FVFC+ +  VG++   +D  ++ + + + D   +RY SI   ++S  + L+
Sbjct:    2 GDQEATNDVNEDVEKMITLWRNELNAPDMLEYNNDLVAALLEQIKNQQEYIDSISDNRECLTEERSFTNKLYQMEIDRLRYMLASYLRTRLKKIEKYSQYIIKTPAYLDRLSEKERIYAQQHAALVATHLNNAALSKIPDEHQSLDSEGMA---SEPNLDEFVFCQSQGEVGQVRC-DDRGAEFVQVREKDRHVIRYRSIDNFVKSNQIFLI 209          
BLAST of Gchil6835.t2 vs. uniprot
Match: F0WP87_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WP87_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.510e-25
Identity = 66/204 (32.35%), Postives = 113/204 (55.39%), Query Frame = 0
Query:   47 LNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLE----SQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHDSGPNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL 246
            +NE I++M+ L RNE  +P IL +    +  +   IK Q   +D   D   N++ E    ++L ++EIDR+ Y L  Y R R++KIE     I K +  L+ LSE E  YA  + +L+  H   + LS +P + +V++ DG       PNLD+FVFC+ +  +G++   +D  ++ + + + D   +RY SIS  ++++ V L+
Sbjct:   10 INEDIEKMMTLWRNELNAPDILNYNNDLVVALLEQIKNQQGYIDSIGDDRGNLTEERSFTNKLYQMEIDRLRYVLASYLRTRLQKIERYSKHIVKTTVYLDRLSEKECIYAQQHASLIATHLNNTALSRIPEEHRVLDSDGMALE---PNLDKFVFCQSQEELGQVRC-DDRGAEFVQVREKDRHVIRYRSISNFVETDQVFLI 209          
BLAST of Gchil6835.t2 vs. uniprot
Match: A0A6H5KSS9_9PHAE (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSS9_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.460e-24
Identity = 64/205 (31.22%), Postives = 112/205 (54.63%), Query Frame = 0
Query:   47 LNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSS--MLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHD-SGPNLDRFVFCRVRSNVGRIAVGEDSTSD--AMNLNQNDILCVRYNSISELLQSEDVELL 246
            LNE + ++  L RNE  +P +L  +   +  +   ++ Q ++VDD    +   +  + L ++E+DR+ Y+L  Y R R++K+E + L +   +   M   LS+ E  +A GY ++LEDHF ++ LS +P   + +      ++    PNLD FV CR R +VG + +GE +  +  +M+L Q D+  VRY  I  L+    V+L+
Sbjct:   33 LNEDVAKLRTLWRNEVCAPELLKVDEHLVSDLIQQVENQQEIVDDAR-ASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATADGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLEGRVDLI 236          
BLAST of Gchil6835.t2 vs. uniprot
Match: A0A2P6NQT8_9EUKA (DNA replication complex GINS protein SLD5 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQT8_9EUKA)

HSP 1 Score: 104 bits (259), Expect = 1.580e-23
Identity = 64/202 (31.68%), Postives = 111/202 (54.95%), Query Frame = 0
Query:   46 GLNEAIDRMVMLARNEQFSPGILPHEFQTI-QVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHDSGPNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL 246
            G    + ++   A NE+ +P +L ++ + + Q+ Q+L  Q+  +     +      L +  +++EIDRI+Y LR Y R RI KIE++      + +    LS +E ++A  Y +L++ H+++SFL  LP ++   E+D      +  NLD +V CRV   +G+I + +D T +   LN+ND++ +RY  I  LL    VELL
Sbjct:   40 GKGSLVQKIKTAALNERSAPELLEYKEELVDQIKQSLRSQKQRINGPFTEFQFEEKLFTSFQQMEIDRISYLLRSYLRSRIVKIEKHHSKFVSDETYHQRLSPSEQKFAQSYTDLIKSHYRESFLQSLPDRVNSGEEDAMT---ARINLDEYVICRVLERIGQIEL-DDQTDEFAELNENDVVLIRYRPIQHLLVEGKVELL 237          
BLAST of Gchil6835.t2 vs. uniprot
Match: A0A250XBE6_9CHLO (DNA replication complex GINS protein SLD5 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XBE6_9CHLO)

HSP 1 Score: 103 bits (258), Expect = 1.730e-23
Identity = 67/220 (30.45%), Postives = 114/220 (51.82%), Query Frame = 0
Query:   26 AGHTQTRLPNALEGENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEK--DGSVDHDSG---PNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQS 240
            A  + T L + L+  +PS    +  +++++    NE+ +P ILP++   ++ +Q  +++Q DL+ ++ D      L   +  LE+ RI Y LR YFR R++K+E     +  +  M+  LS  E  Y   +  L   H K + L  LPL  Q + K  +G  D +     P LD  VFC VR +VG I + ED+  D   +  N++  +RY+ +S+L+ S
Sbjct:    6 ASFSGTPLTDFLDDSSPSTS--SNIVEKLIRAVFNEKNAPEILPYQADMVKDLQEKVEKQEDLLAEDLDREPAQELRKIVFSLELKRIRYLLRLYFRTRLRKLEATAAHVLGDEEMMERLSPLEQLYTQDFFVLAGTHLKGACLDRLPLDFQSVVKTHEGLADGNDMVLVPPLDAHVFCSVREDVGSIPLEEDNVLD---MKANELFIIRYSLVSKLVMS 220          
BLAST of Gchil6835.t2 vs. uniprot
Match: D8LTQ1_ECTSI (DNA replication complex GINS protein SLD5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ1_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.630e-22
Identity = 61/195 (31.28%), Postives = 106/195 (54.36%), Query Frame = 0
Query:   57 LARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFK--NSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHD-SGPNLDRFVFCRVRSNVGRIAVGEDSTSD--AMNLNQNDILCVRYNSISELLQSEDVELL 246
            L RNE  +P +L  +   +  +   ++ Q ++VDD    +   +  + L ++E+DR+ Y+L  Y R R++K+E + L +    +  M   LS+ E  +A GY ++LEDHF ++ LS +P   + +      ++    PNLD FV CR R +VG + +GE +  +  +M+L Q D+  VRY  I  L+    V+L+
Sbjct:   43 LWRNEVSAPELLKVDEHLVSDLIQQVENQQEIVDDAR-ASPEEAFSASLYQMELDRLRYSLSKYLRTRLRKVERDALHVLATVDGEMQGRLSDREREHAKGYVDMLEDHFTRTCLSQMPSNFRSLTNTSQEENMVQEPNLDTFVVCRARDDVGLVQIGEAAGREESSMDLRQGDMFIVRYRPIRTLVLGGRVDLI 236          
BLAST of Gchil6835.t2 vs. uniprot
Match: A0A1W0A827_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A827_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.740e-22
Identity = 65/211 (30.81%), Postives = 114/211 (54.03%), Query Frame = 0
Query:   40 ENPSQPGLNEAIDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVD----DEDDTNANVSLESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAENRYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHDSGPNLDRFVFCRVRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL 246
            E  +Q  LNE IDR+     NE  +P IL  + + ++ I   ++ Q + VD    D++      +  ++L ++EIDRI Y +  Y RVR+ KIE++   +  NS  L+ LS+ E  YA+ Y  LL+ HF    LS  P++ + ++    +D    P+LD FVFC  + ++G++   E   ++ +++ QND+  +RY ++   +    + LL
Sbjct:    5 EGMAQDNLNEDIDRLREAWINELNAPEILDFQSELMEEILEQVQNQQEFVDEISRDQEKMTEERAFANKLYQMEIDRIKYMIASYLRVRLSKIEQHTRHVISNS--LDRLSQGEIDYANKYLELLDAHFHDLALSKFPVEQRKLDAPDMID---APDLDAFVFCLSKEDLGQVQCDERG-AEHVSIRQNDLHVLRYRAVQSFINEGTMVLL 209          
The following BLAST results are available for this feature:
BLAST of Gchil6835.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXJ8_9FLOR1.910e-10062.10DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
R7Q402_CHOCR4.200e-8253.06DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A0L0D2U3_THETB2.360e-2532.50DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A024GPQ5_9STRA3.930e-2530.66DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
F0WP87_9STRA5.510e-2532.35DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A6H5KSS9_9PHAE1.460e-2431.22DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A2P6NQT8_9EUKA1.580e-2331.68DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A250XBE6_9CHLO1.730e-2330.45DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
D8LTQ1_ECTSI1.630e-2231.28DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A1W0A827_9STRA1.740e-2230.81DNA replication complex GINS protein SLD5 n=1 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1030coord: 38..235
e-value: 7.2E-45
score: 155.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..45
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 192..246
IPR031633DNA replication complex GINS protein SLD5, C-terminalPFAMPF16922SLD5_Ccoord: 191..246
e-value: 1.5E-14
score: 53.9
IPR008591GINS complex subunit Sld5PANTHERPTHR21206SLD5 PROTEINcoord: 33..246
IPR038749GINS complex protein Sld5, alpha-helical domainCDDcd11711GINS_A_Sld5coord: 50..169
e-value: 8.41581E-26
score: 95.755
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 48..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:232804..233544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6835.t2Gchil6835.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 232804..233544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6835.t2 ID=Gchil6835.t2|Name=Gchil6835.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=247bp
MSSYSDHGDEIPRFSFGSMALSQEQAGHTQTRLPNALEGENPSQPGLNEA
IDRMVMLARNEQFSPGILPHEFQTIQVIQALIKQQSDLVDDEDDTNANVS
LESQLKRLEIDRINYTLRHYFRVRIKKIEENILFIFKNSSMLNDLSEAEN
RYASGYRNLLEDHFKKSFLSMLPLKIQVIEKDGSVDHDSGPNLDRFVFCR
VRSNVGRIAVGEDSTSDAMNLNQNDILCVRYNSISELLQSEDVELL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031633SLD5_C
IPR008591GINS_Sld5
IPR038749Sld5_GINS_A
IPR036224GINS_bundle-like_dom_sf