Gchil6810.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6810.t1
Unique NameGchil6810.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length206
Homology
BLAST of Gchil6810.t1 vs. uniprot
Match: A0A2V3J367_9FLOR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J367_9FLOR)

HSP 1 Score: 345 bits (884), Expect = 3.040e-118
Identity = 170/207 (82.13%), Postives = 182/207 (87.92%), Query Frame = 0
Query:    1 MSAQTLQQVVRAAALISRIQPKG--AGLSEISSSAALSRHAAAPSLVFSRTVHSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLCT 205
            M+A +L+   +AA   S    K    GL+++SS +AL+ +A   +L   R +HSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMM AGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLCT
Sbjct:   46 MTASSLRYAAQAAIRASAAASKNNAVGLAQLSSPSALANYAPQTALAIPRAIHSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMHAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLCT 252          
BLAST of Gchil6810.t1 vs. uniprot
Match: S0F3N1_CHOCR (Putative NADH2 dehydrogenase (Ubiquinone) chain PSST n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3N1_CHOCR)

HSP 1 Score: 334 bits (857), Expect = 1.640e-114
Identity = 161/170 (94.71%), Postives = 162/170 (95.29%), Query Frame = 0
Query:   34 ALSRHAAAPSLVFSRTVHSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            ALS      SLV  RTVHSSSARDSK+AHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL
Sbjct:   37 ALSTTVVPTSLVHLRTVHSSSARDSKVAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 206          
BLAST of Gchil6810.t1 vs. uniprot
Match: UPI001E1DCBAC (NADH-quinone oxidoreductase subunit B 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCBAC)

HSP 1 Score: 311 bits (796), Expect = 2.870e-105
Identity = 144/156 (92.31%), Postives = 149/156 (95.51%), Query Frame = 0
Query:   48 RTVHSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            R  HSSSARDSK+AHLKGMQP+N AEYVVTKLDDL+NWARNNSLWPMTFGLACCAVEMM AGA+RYDLDRFG +FRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMP P WVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL
Sbjct:   49 RFAHSSSARDSKVAHLKGMQPANNAEYVVTKLDDLLNWARNNSLWPMTFGLACCAVEMMHAGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPAPCWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 204          
BLAST of Gchil6810.t1 vs. uniprot
Match: A0A1X6PJ12_PORUM (Oxidored_q6 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJ12_PORUM)

HSP 1 Score: 291 bits (745), Expect = 2.410e-97
Identity = 134/155 (86.45%), Postives = 145/155 (93.55%), Query Frame = 0
Query:   49 TVHSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            T  +SSAR++ +A+L+G QP   +EYVVT+LDDLVNWARNNSLWPMTFGLACCAVEMM AGA+RYDLDRFG +FRPSPRQSD MIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEALL
Sbjct:   61 TTATSSARNAPVANLQGAQPIGNSEYVVTRLDDLVNWARNNSLWPMTFGLACCAVEMMHAGAARYDLDRFGMIFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALL 215          
BLAST of Gchil6810.t1 vs. uniprot
Match: A0A0L0D595_THETB (Oxidored_q6 domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D595_THETB)

HSP 1 Score: 274 bits (700), Expect = 1.370e-90
Identity = 123/149 (82.55%), Postives = 133/149 (89.26%), Query Frame = 0
Query:   55 ARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            A  S  A + G  PSN+ EYVV KLDDLVNWAR  S+WPMTFGLACCAVEMMQ  A+RYD+DRFG +FRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWV+SMGSCANGGGYYHYSY+VVRGCDRIVPVD+YVPGCPPTAE L+
Sbjct:   61 AGPSSSALVAGTPPSNKGEYVVAKLDDLVNWARKGSIWPMTFGLACCAVEMMQCAAARYDVDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDVYVPGCPPTAEGLM 209          
BLAST of Gchil6810.t1 vs. uniprot
Match: A0A7S0ZIP6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIP6_9RHOD)

HSP 1 Score: 273 bits (697), Expect = 2.620e-90
Identity = 123/143 (86.01%), Postives = 131/143 (91.61%), Query Frame = 0
Query:   61 AHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            + +  M P N  E+VV+KLDDL NWARNNSLWPMTFGLACCAVEMM AGA+RYDLDRFG +FRPSPRQSD MIVAGTLTNKMAPALRKVYDQMP P+WVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEALL
Sbjct:   55 SRVPSMAPQNNMEFVVSKLDDLTNWARNNSLWPMTFGLACCAVEMMHAGAARYDLDRFGMIFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMPNPKWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALL 197          
BLAST of Gchil6810.t1 vs. uniprot
Match: A0A2G5DHR5_AQUCA (Oxidored_q6 domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DHR5_AQUCA)

HSP 1 Score: 272 bits (695), Expect = 4.450e-90
Identity = 138/188 (73.40%), Postives = 152/188 (80.85%), Query Frame = 0
Query:   22 KGAGLSEISS------SAALSRHAAAPSLVFSRTVHSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            KGA L +ISS      +A+ S H   PSL  S +  + S   +  +   G+  S  AEYVV+K+DDL+NWAR  S+WPMTFGLACCAVEMM AGA+RYD DRFG +FRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL
Sbjct:    7 KGARLPQISSQIRASVTASASIHTTNPSLSSSPSPATYSRPAALTSPSDGL--SKTAEYVVSKVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 192          
BLAST of Gchil6810.t1 vs. uniprot
Match: A0A200QDA2_9MAGN (NADH:ubiquinone oxidoreductase-like n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QDA2_9MAGN)

HSP 1 Score: 271 bits (694), Expect = 5.340e-90
Identity = 136/186 (73.12%), Postives = 148/186 (79.57%), Query Frame = 0
Query:   21 PKGAGLSEISSSAALSRHAAAPSLVFSRTVHSSSARDSKIAHLKGMQP---SNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            P+ A L+ ISS    S H   P+L    T  SS++       L    P   S  AEYV++K+DDL+NWAR  S+WPMTFGLACCAVEMM AGA+RYD DRFG +FRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL
Sbjct:    5 PRAARLALISSQRTASIHTTLPAL---STPSSSTSPTPYSRPLPPTTPNGISKAAEYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 187          
BLAST of Gchil6810.t1 vs. uniprot
Match: A0A0D2LR70_GOSRA (Oxidored_q6 domain-containing protein n=20 Tax=Gossypium TaxID=3633 RepID=A0A0D2LR70_GOSRA)

HSP 1 Score: 270 bits (690), Expect = 2.400e-89
Identity = 122/135 (90.37%), Postives = 128/135 (94.81%), Query Frame = 0
Query:   69 SNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            S  AEYV++K+DDL+NWAR  S+WPMTFGLACCAVEMM AGASRYD DRFG +FRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL
Sbjct:   56 SKPAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 190          
BLAST of Gchil6810.t1 vs. uniprot
Match: K3Z9R4_SETIT (Oxidored_q6 domain-containing protein n=8 Tax=Poaceae TaxID=4479 RepID=K3Z9R4_SETIT)

HSP 1 Score: 270 bits (689), Expect = 2.430e-89
Identity = 122/135 (90.37%), Postives = 128/135 (94.81%), Query Frame = 0
Query:   69 SNRAEYVVTKLDDLVNWARNNSLWPMTFGLACCAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 203
            S  AE+VV+K+DDL+NWAR  S+WPMTFGLACCAVEMM AGASRYD DRFG +FRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL
Sbjct:   46 SKAAEFVVSKIDDLMNWARRGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL 180          
The following BLAST results are available for this feature:
BLAST of Gchil6810.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J367_9FLOR3.040e-11882.13NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
S0F3N1_CHOCR1.640e-11494.71Putative NADH2 dehydrogenase (Ubiquinone) chain PS... [more]
UPI001E1DCBAC2.870e-10592.31NADH-quinone oxidoreductase subunit B 1-like n=1 T... [more]
A0A1X6PJ12_PORUM2.410e-9786.45Oxidored_q6 domain-containing protein n=1 Tax=Porp... [more]
A0A0L0D595_THETB1.370e-9082.55Oxidored_q6 domain-containing protein n=1 Tax=Thec... [more]
A0A7S0ZIP6_9RHOD2.620e-9086.01Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A2G5DHR5_AQUCA4.450e-9073.40Oxidored_q6 domain-containing protein n=2 Tax=Thal... [more]
A0A200QDA2_9MAGN5.340e-9073.12NADH:ubiquinone oxidoreductase-like n=1 Tax=Maclea... [more]
A0A0D2LR70_GOSRA2.400e-8990.37Oxidored_q6 domain-containing protein n=20 Tax=Gos... [more]
K3Z9R4_SETIT2.430e-8990.37Oxidored_q6 domain-containing protein n=8 Tax=Poac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitTIGRFAMTIGR01957TIGR01957coord: 75..203
e-value: 2.6E-71
score: 236.2
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitPROSITEPS01150COMPLEX1_20Kcoord: 181..197
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitPFAMPF01058Oxidored_q6coord: 100..203
e-value: 1.2E-19
score: 70.5
NoneNo IPR availableGENE3D3.40.50.12280coord: 58..205
e-value: 8.9E-76
score: 255.0
NoneNo IPR availablePANTHERPTHR11995NADH DEHYDROGENASEcoord: 33..203
NoneNo IPR availablePANTHERPTHR11995:SF28NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIALcoord: 33..203
NoneNo IPR availableSUPERFAMILY56770HydA/Nqo6-likecoord: 73..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1311542..1312360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6810.t1Gchil6810.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1311542..1312360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6810.t1 ID=Gchil6810.t1|Name=Gchil6810.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=206bp
MSAQTLQQVVRAAALISRIQPKGAGLSEISSSAALSRHAAAPSLVFSRTV
HSSSARDSKIAHLKGMQPSNRAEYVVTKLDDLVNWARNNSLWPMTFGLAC
CAVEMMQAGASRYDLDRFGFLFRPSPRQSDCMIVAGTLTNKMAPALRKVY
DQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAE
ALLCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006138NADH_UQ_OxRdtase_20Kd_su
IPR006137NADH_UbQ_OxRdtase-like_20kDa