Gchil6795.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6795.t1
Unique NameGchil6795.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length113
Homology
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BLAST of Gchil6795.t1 vs. uniprot
Match: A0A2V3J273_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J273_9FLOR)

HSP 1 Score: 169 bits (427), Expect = 2.210e-52
Identity = 83/112 (74.11%), Postives = 92/112 (82.14%), Query Frame = 0 
Query:    1 MRDVILSGTAGFLFACAGGFAVHRSVWKSADEQAKKLDAIVGNVDNSAAASRNRQPTESFEGFIARRFCQWWNNGVDNVHRRLLNFPQTVSKIVEDVKHTTSKSSKAPDSSQ 112
            MRDVILSGTAGFLFAC GGF+VHRSVWKSADEQAK+LDAIVGN     +     + TESFE FIARRFCQWWNNGVDNVHRRLLNFPQTV +IV DV+    K +++PDSSQ
Sbjct:    1 MRDVILSGTAGFLFACVGGFSVHRSVWKSADEQAKRLDAIVGNTQIPIST----RGTESFESFIARRFCQWWNNGVDNVHRRLLNFPQTVGRIVTDVRARAPKPAESPDSSQ 108
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BLAST of Gchil6795.t1 vs. uniprot
Match: S0F382_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F382_CHOCR)

HSP 1 Score: 121 bits (303), Expect = 1.690e-33
Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 0 
Query:    1 MRDVILSGTAGFLFACAGGFAVHRSVWKSADEQAKKLDAIVGNVDNSAAASRNRQPTESFEGFIARRFCQWWNNGVDNVHRRLLNFPQTVSKIVEDVK 98
            MRD++LSGTAGF  +CA  FAVHR++WK+A++Q+++LD + G     +  +  R+  +SFEGFI RRF QWWN+ VDNVH RLL  P TV+ IV+D K
Sbjct:    1 MRDILLSGTAGFFSSCAAAFAVHRALWKAAEDQSQQLDELAGRSQAHSVIAPKRRLADSFEGFIFRRFSQWWNSSVDNVHGRLLGLPDTVNGIVQDAK 98
The following BLAST results are available for this feature:
BLAST of Gchil6795.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J273_9FLOR2.210e-5274.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
S0F382_CHOCR1.690e-3354.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1200826..1201252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6795.t1Gchil6795.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1200826..1201252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6795.t1 ID=Gchil6795.t1|Name=Gchil6795.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=113bp
MRDVILSGTAGFLFACAGGFAVHRSVWKSADEQAKKLDAIVGNVDNSAAA
SRNRQPTESFEGFIARRFCQWWNNGVDNVHRRLLNFPQTVSKIVEDVKHT
TSKSSKAPDSSQ*
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