Gchil6735.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6735.t1
Unique NameGchil6735.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length151
Homology
BLAST of Gchil6735.t1 vs. uniprot
Match: A0A2V3IHK0_9FLOR (PS II complex 12 kDa extrinsic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHK0_9FLOR)

HSP 1 Score: 229 bits (585), Expect = 3.190e-75
Identity = 118/150 (78.67%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    1 MAFVTGPALPAARPSTVSVRHVCMAADSQPPKLSRRQLITRALAAAALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            MAFVTGPALP +R S V+ R V M   S+P + SRR+L+T+ALAAAA+VSLP  + AEREYPNVGFLGG D IDINNANVRAYQKFRGFYPTLAGLI +NGPYSSVD+LY+LPGLTDAMK SLDEYKEKLVAL PTPEY IDKINNGLYR
Sbjct:    1 MAFVTGPALPTSRASRVAARPVSMT-TSRPAQFSRRELLTKALAAAAIVSLPRQAFAEREYPNVGFLGGGDQIDINNANVRAYQKFRGFYPTLAGLIVTNGPYSSVDELYKLPGLTDAMKNSLDEYKEKLVALEPTPEYEIDKINNGLYR 149          
BLAST of Gchil6735.t1 vs. uniprot
Match: R7Q963_CHOCR (PS II complex 12 kDa extrinsic protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q963_CHOCR)

HSP 1 Score: 189 bits (479), Expect = 4.710e-59
Identity = 97/154 (62.99%), Postives = 116/154 (75.32%), Query Frame = 0
Query:    1 MAFVTGPALPAARP----STVSVRHVCMAADSQPPKLSRRQLITRALAAAALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            MAFVTGPALP+ R     ST +VR   MAAD+    +SRR +I   +AA    +LP  + AEREYPNVGFLGGSD+ID+NNANVRAY KF+GFYPTLAGLI +NGPY SVD+L+ LP LT  MK +L++YK+ L AL PTPEY +DK NNGLYR
Sbjct:    1 MAFVTGPALPSLRAARATSTCTVR---MAADAAEEPVSRRAIIAGVVAAXXXAALPKVANAEREYPNVGFLGGSDVIDVNNANVRAYVKFQGFYPTLAGLIVANGPYKSVDELFALPDLTPQMKTTLEKYKDNLTALEPTPEYELDKFNNGLYR 151          
BLAST of Gchil6735.t1 vs. uniprot
Match: UPI001E1DC914 (photosystem II 12 kDa extrinsic protein, chloroplastic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC914)

HSP 1 Score: 166 bits (419), Expect = 6.470e-50
Identity = 89/155 (57.42%), Postives = 113/155 (72.90%), Query Frame = 0
Query:    1 MAFVTGPALPAAR----PSTVSVRHVCMAADSQPPKLSRRQLITRALAA-AALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            MAFV G +LP +R    P+   +R   M  +   PK+SRR  +  A++A AA + +P +++AE EY NVG+LGG D ID+NNANVRAY K+ GFYPTLAGLI SNGPY SVD+L +LPGLT AMK +L++YK  LVAL P PEY IDK+NNGLY+
Sbjct:    1 MAFVPGASLPCSRTECRPAVCGLR---MNVNEDVPKVSRRAALAAAVSAVAAGLVVPLSAQAEIEYANVGYLGGGDQIDVNNANVRAYLKYPGFYPTLAGLIVSNGPYKSVDELSKLPGLTSAMKETLEKYKNNLVALEPAPEYEIDKLNNGLYK 152          
BLAST of Gchil6735.t1 vs. uniprot
Match: A0A1X6NM48_PORUM (PS II complex 12 kDa extrinsic protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM48_PORUM)

HSP 1 Score: 155 bits (393), Expect = 5.250e-46
Identity = 84/152 (55.26%), Postives = 112/152 (73.68%), Query Frame = 0
Query:    1 MAFVTGPALPAARPSTVSVRHVCMAADSQPPKLSRRQLITRALAAAALVSLPSA--SRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            MAFV G A P    +  +   +CM+A+ +P  +SRR  +T A AAAAL ++  +  + AE EY NV FLGGSDIIDINNANVRAY K+ G YPT+AG++A+NGPY SV D++++PGLT+    +L +Y++KLVAL PTPEY +DK+NNGLYR
Sbjct:    1 MAFV-GAAAPLRVAAPAARSSICMSAEDKPA-VSRRAALTGA-AAAALAAMAGSLPAMAETEYANVPFLGGSDIIDINNANVRAYAKYPGMYPTVAGILATNGPYESVSDVFKIPGLTERQVNTLKKYQDKLVALTPTPEYELDKVNNGLYR 149          
BLAST of Gchil6735.t1 vs. uniprot
Match: PSBU_GRIJA (Photosystem II 12 kDa extrinsic protein, chloroplastic n=1 Tax=Griffithsia japonica TaxID=83288 RepID=PSBU_GRIJA)

HSP 1 Score: 153 bits (386), Expect = 6.870e-45
Identity = 82/153 (53.59%), Postives = 100/153 (65.36%), Query Frame = 0
Query:    1 MAFVTGPALPAARPS-TVSVRHVCMAADSQPPKLSRRQLITRALAAAALVSLPSAS--RAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            MAF++GPALP AR + TV+   V MA+    P +SRR L++             A+  +A+REY NVGFLGG D ID+NNANVR Y +  G YPTLAGLI +NGPY SV DLY +PGL D     L +Y++  VAL P PEY IDK NNGLYR
Sbjct:    1 MAFISGPALPTARVNRTVAATPVRMASGEDTPVVSRRALLSXXXXXXXXXXXXXAAPAKADREYGNVGFLGGGDKIDVNNANVRVYGRLPGMYPTLAGLIVANGPYKSVGDLYNIPGLDDKQTGLLKKYEDSFVALEPRPEYEIDKFNNGLYR 153          
BLAST of Gchil6735.t1 vs. uniprot
Match: A0A7S1EUZ7_9RHOD (PS II complex 12 kDa extrinsic protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUZ7_9RHOD)

HSP 1 Score: 144 bits (362), Expect = 2.920e-41
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 0
Query:    1 MAFVTGPAL----PAARPSTVSVRHVCMAADSQPPKLSRRQLITRALAAA-ALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            MAF++G  L     AA     +VR   M+A+S+   +SRRQL+  ++AAA A V+   A+ A+REY NVGFLGG D +D+NNANVRAY +F G YP +AG+I  NGPY SV DLY+L  L D  K  L +Y+ KLVAL P PEY+ID+ NNGLYR
Sbjct:    2 MAFISGAGLVTKSSAAPAKCCAVR---MSAESEDGAVSRRQLLAGSVAAALAAVAAVPAALADREYENVGFLGGGDQVDVNNANVRAYIQFPGMYPNIAGVICKNGPYDSVADLYKLD-LNDKQKEVLKKYESKLVALPPRPEYMIDRFNNGLYR 152          
BLAST of Gchil6735.t1 vs. uniprot
Match: PSBU_NEOYE (Photosystem II 12 kDa extrinsic protein, chloroplastic n=1 Tax=Neopyropia yezoensis TaxID=2788 RepID=PSBU_NEOYE)

HSP 1 Score: 143 bits (361), Expect = 4.140e-41
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 0
Query:   45 AAALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            AA   SLP+   AE EY NV FLGGS IIDINNANVRAY K+ G YPT+AGLIA+NGP+ +V DLY++PGLTD   A+L +Y++KLVAL PTPEY +DK+NNGLYR
Sbjct:   49 AAVAGSLPAL--AETEYANVPFLGGSVIIDINNANVRAYAKYPGMYPTVAGLIATNGPFETVSDLYKIPGLTDLQIATLKKYEDKLVALTPTPEYELDKVNNGLYR 152          
BLAST of Gchil6735.t1 vs. uniprot
Match: A0A1Z5K6S3_FISSO (PS II complex 12 kDa extrinsic protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6S3_FISSO)

HSP 1 Score: 137 bits (346), Expect = 6.500e-39
Identity = 65/116 (56.03%), Postives = 87/116 (75.00%), Query Frame = 0
Query:   35 RRQLITRALAAAALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            RR+ ++ ALA AA ++ P A+ A R+Y NVG+LGGS+I+D+NNANVR Y K  G YPT+AG IA+NGPY SV DLY +PGL+   K  + +Y+ +  AL P+ +YVID+INNGLYR
Sbjct:   32 RREFLS-ALAGAAALAAPMAANAVRDYDNVGYLGGSEIVDVNNANVRVYLKMPGLYPTVAGKIATNGPYKSVGDLYNIPGLSGKEKELIKKYESRFTALEPSADYVIDRINNGLYR 146          
BLAST of Gchil6735.t1 vs. uniprot
Match: A0A7S3L326_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L326_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.350e-38
Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 0
Query:   35 RRQLITRALAAAALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            RR+ ++ A+ AAA +++P ++ A R+Y N+ +LGGSD IDINNANVR Y K  G YP+ AG IA+NGPY+SV D+Y +PGLT   K  + +Y+ K  AL+P+ +YVID+INNGLYR
Sbjct:   32 RREFLSAAVVAAAGLAVPGSALAVRDYENLAYLGGSDTIDINNANVRVYLKLPGMYPSAAGKIAANGPYNSVGDIYNIPGLTSKEKEVMKKYESKFTALKPSADYVIDRINNGLYR 147          
BLAST of Gchil6735.t1 vs. uniprot
Match: B6ZHF0_9STRA (PS II complex 12 kDa extrinsic protein n=2 Tax=Chaetoceros gracilis TaxID=184592 RepID=B6ZHF0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 8.700e-38
Identity = 71/148 (47.97%), Postives = 97/148 (65.54%), Query Frame = 0
Query:    3 FVTGPALPAARPSTVSVRHVCMAADSQPPKLSRRQLITRALAAAALVSLPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASNGPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR 150
            F +  A   + P+T +     + A+S      RR+    AL AAA ++ P A+ A  +Y N+G+LGGS I+DINNANVRAY K  G YPT+AG I S+GPYS V DLY++PGL+ A    + +Y+ +L A  P+P+YVID+INNGLYR
Sbjct:   10 FASAAAFAPSNPTTSATSTTALQAES-----GRREFFG-ALTAAAALAAPVAANAVIDYENIGYLGGSSIVDINNANVRAYLKMPGMYPTVAGKIVSHGPYSGVADLYKIPGLSSAEADVIKKYESRLTAKTPSPDYVIDRINNGLYR 151          
The following BLAST results are available for this feature:
BLAST of Gchil6735.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHK0_9FLOR3.190e-7578.67PS II complex 12 kDa extrinsic protein n=1 Tax=Gra... [more]
R7Q963_CHOCR4.710e-5962.99PS II complex 12 kDa extrinsic protein n=1 Tax=Cho... [more]
UPI001E1DC9146.470e-5057.42photosystem II 12 kDa extrinsic protein, chloropla... [more]
A0A1X6NM48_PORUM5.250e-4655.26PS II complex 12 kDa extrinsic protein n=1 Tax=Por... [more]
PSBU_GRIJA6.870e-4553.59Photosystem II 12 kDa extrinsic protein, chloropla... [more]
A0A7S1EUZ7_9RHOD2.920e-4153.55PS II complex 12 kDa extrinsic protein n=1 Tax=Tim... [more]
PSBU_NEOYE4.140e-4166.98Photosystem II 12 kDa extrinsic protein, chloropla... [more]
A0A1Z5K6S3_FISSO6.500e-3956.03PS II complex 12 kDa extrinsic protein n=2 Tax=Fis... [more]
A0A7S3L326_9STRA1.350e-3854.31PS II complex 12 kDa extrinsic protein n=1 Tax=Amp... [more]
B6ZHF0_9STRA8.700e-3847.97PS II complex 12 kDa extrinsic protein n=2 Tax=Cha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.320Photosystem II 12 kDa extrinsic proteincoord: 62..141
e-value: 1.9E-23
score: 83.7
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 61..150
IPR010527Photosystem II PsbU, oxygen evolving complexPFAMPF06514PsbUcoord: 71..149
e-value: 3.7E-27
score: 94.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:693194..693646 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6735.t1Gchil6735.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 693194..693646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6735.t1 ID=Gchil6735.t1|Name=Gchil6735.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=151bp
MAFVTGPALPAARPSTVSVRHVCMAADSQPPKLSRRQLITRALAAAALVS
LPSASRAEREYPNVGFLGGSDIIDINNANVRAYQKFRGFYPTLAGLIASN
GPYSSVDDLYELPGLTDAMKASLDEYKEKLVALRPTPEYVIDKINNGLYR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010527PSII_PsbU