Gchil6653.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6653.t1
Unique Name	Gchil6653.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	252

Homology

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BLAST of Gchil6653.t1 vs. uniprot
Match: A0A2V3J024_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J024_9FLOR)

HSP 1 Score: 226 bits (575), Expect = 2.560e-70
Identity = 130/265 (49.06%), Postives = 172/265 (64.91%), Query Frame = 0

Query:    4 LKASSLAGGRTSVVQRASNRNRNILESLTGAINHRHCATHPAPLPHDAPPKKKNSKPSQMEKKCLNEKVVEENTRSDTG-------------KIPDIPSNSWSSIGFEPEDANDPNKWKKFAWKYVGAVLLFFVSYKTLHWYVDRIEEEGQQSKKNLEESREFSNELKKGGTTSVNTSSMLQNAVE-----QNPELKRMLEPITESSFQTSSELEELYKFRDELNAKLRELRKRGRNPEIDAEKKEVQIELKALASEISTLERNK 250
            L+A++ AG R  + +   N N   +  LT  +  R+CA  PAP     PP+  ++  S+   +       E  T  D+              KIPDIPSNSW+SIGFEP+D NDP+KWKKFAWKY GAVL+FF+SYKTLHWYVDRIEEEG+Q KK +EE+REFS+E+KK G++ +  S +   + E     Q+ +L +ML+   E+  QTSSEL+ELY++R EL  KLR+LRKRGR PEIDAEKKEV+++LK L  +I  LE  K
Sbjct:   11 LRAATAAGLRRQITRDVVNGN---VTRLTALLQSRYCAAQPAP---SRPPRTNDNPQSESTSQAKLSPQPETRTDKDSSIDKPAETATEPAAKIPDIPSNSWTSIGFEPQDENDPHKWKKFAWKYAGAVLVFFISYKTLHWYVDRIEEEGKQQKKGMEEAREFSDEMKKQGSSPLGASILPDGSKELRRDEQHADLLKMLDTAKENEIQTSSELDELYRYRGELEEKLRDLRKRGRTPEIDAEKKEVKLDLKELTKDIHALEAKK 269

The following BLAST results are available for this feature:

BLAST of Gchil6653.t1 vs. uniprot

BLAST of Gchil6653.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J024_9FLOR	2.560e-70	49.06	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	COILS	Coil	Coil	coord: 199..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..81
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 134..251
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..114
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 115..133

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004390_pilon	contig	tig00004390_pilon:1381719..1382474 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6653.t1	Gchil6653.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004390_pilon 1381719..1382474 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6653.t1 ID=Gchil6653.t1|Name=Gchil6653.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=252bp
MLSLKASSLAGGRTSVVQRASNRNRNILESLTGAINHRHCATHPAPLPHD
APPKKKNSKPSQMEKKCLNEKVVEENTRSDTGKIPDIPSNSWSSIGFEPE
DANDPNKWKKFAWKYVGAVLLFFVSYKTLHWYVDRIEEEGQQSKKNLEES
REFSNELKKGGTTSVNTSSMLQNAVEQNPELKRMLEPITESSFQTSSELE
ELYKFRDELNAKLRELRKRGRNPEIDAEKKEVQIELKALASEISTLERNK
S*