Gchil6653.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil6653.t1
Unique NameGchil6653.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length252
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:1381719..1382474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6653Gchil6653Gracilaria chilensis NLEC103_M9 malegenetig00004390_pilon 1381719..1382474 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6653.t1.stop1Gchil6653.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004390_pilon 1381719..1381721 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6653.t1.CDS1Gchil6653.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004390_pilon 1381719..1382474 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6653.t1.exon1Gchil6653.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004390_pilon 1381719..1382474 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6653.t1.start1Gchil6653.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004390_pilon 1382472..1382474 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil6653.t1Gchil6653.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004390_pilon 1381719..1382474 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil6653.t1 ID=Gchil6653.t1|Name=Gchil6653.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=252bp
MLSLKASSLAGGRTSVVQRASNRNRNILESLTGAINHRHCATHPAPLPHD
APPKKKNSKPSQMEKKCLNEKVVEENTRSDTGKIPDIPSNSWSSIGFEPE
DANDPNKWKKFAWKYVGAVLLFFVSYKTLHWYVDRIEEEGQQSKKNLEES
REFSNELKKGGTTSVNTSSMLQNAVEQNPELKRMLEPITESSFQTSSELE
ELYKFRDELNAKLRELRKRGRNPEIDAEKKEVQIELKALASEISTLERNK
S*
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spliced messenger RNA

>Gchil6653.t1 ID=Gchil6653.t1|Name=Gchil6653.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00004390_pilon:1381719..1382474- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCAGTTTGAAAGCATCCTCTCTTGCTGGTGGTCGAACGAGTGTTGT
CCAGCGTGCTTCTAATCGAAACAGAAACATATTAGAGTCGTTGACCGGAG
CTATAAATCACCGACATTGTGCTACCCACCCTGCTCCACTACCCCACGAC
GCGCCACCGAAAAAGAAAAATTCGAAGCCGTCTCAAATGGAAAAGAAATG
TTTAAATGAGAAAGTGGTCGAAGAGAATACGAGGTCTGATACAGGCAAAA
TTCCAGATATCCCATCAAATTCGTGGTCTTCTATTGGATTTGAACCAGAA
GATGCGAACGATCCCAATAAATGGAAGAAGTTTGCATGGAAGTATGTCGG
AGCTGTGCTGCTGTTCTTTGTCTCGTATAAGACTTTACATTGGTATGTTG
ATAGAATTGAGGAAGAAGGCCAACAAAGTAAGAAAAACTTAGAAGAATCG
CGAGAATTTTCGAATGAGCTAAAGAAAGGCGGAACAACTTCTGTGAACAC
GTCCTCAATGCTTCAAAACGCCGTTGAGCAAAACCCTGAGCTAAAACGAA
TGCTGGAGCCGATTACCGAAAGTAGTTTTCAAACTTCATCGGAACTAGAA
GAATTGTACAAATTCCGTGATGAACTTAATGCCAAACTCAGAGAATTGCG
AAAAAGGGGACGCAACCCCGAAATAGATGCAGAAAAGAAGGAAGTTCAAA
TCGAACTGAAAGCACTTGCCAGCGAAATAAGTACCCTAGAAAGGAATAAA
TCATGA
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protein sequence of Gchil6653.t1

>Gchil6653.t1 ID=Gchil6653.t1|Name=Gchil6653.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=252bp
MLSLKASSLAGGRTSVVQRASNRNRNILESLTGAINHRHCATHPAPLPHD
APPKKKNSKPSQMEKKCLNEKVVEENTRSDTGKIPDIPSNSWSSIGFEPE
DANDPNKWKKFAWKYVGAVLLFFVSYKTLHWYVDRIEEEGQQSKKNLEES
REFSNELKKGGTTSVNTSSMLQNAVEQNPELKRMLEPITESSFQTSSELE
ELYKFRDELNAKLRELRKRGRNPEIDAEKKEVQIELKALASEISTLERNK
S*
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mRNA from alignment at tig00004390_pilon:1381719..1382474-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil6653.t1 ID=Gchil6653.t1|Name=Gchil6653.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=756bp|location=Sequence derived from alignment at tig00004390_pilon:1381719..1382474- (Gracilaria chilensis NLEC103_M9 male)
ATGCTCAGTTTGAAAGCATCCTCTCTTGCTGGTGGTCGAACGAGTGTTGT
CCAGCGTGCTTCTAATCGAAACAGAAACATATTAGAGTCGTTGACCGGAG
CTATAAATCACCGACATTGTGCTACCCACCCTGCTCCACTACCCCACGAC
GCGCCACCGAAAAAGAAAAATTCGAAGCCGTCTCAAATGGAAAAGAAATG
TTTAAATGAGAAAGTGGTCGAAGAGAATACGAGGTCTGATACAGGCAAAA
TTCCAGATATCCCATCAAATTCGTGGTCTTCTATTGGATTTGAACCAGAA
GATGCGAACGATCCCAATAAATGGAAGAAGTTTGCATGGAAGTATGTCGG
AGCTGTGCTGCTGTTCTTTGTCTCGTATAAGACTTTACATTGGTATGTTG
ATAGAATTGAGGAAGAAGGCCAACAAAGTAAGAAAAACTTAGAAGAATCG
CGAGAATTTTCGAATGAGCTAAAGAAAGGCGGAACAACTTCTGTGAACAC
GTCCTCAATGCTTCAAAACGCCGTTGAGCAAAACCCTGAGCTAAAACGAA
TGCTGGAGCCGATTACCGAAAGTAGTTTTCAAACTTCATCGGAACTAGAA
GAATTGTACAAATTCCGTGATGAACTTAATGCCAAACTCAGAGAATTGCG
AAAAAGGGGACGCAACCCCGAAATAGATGCAGAAAAGAAGGAAGTTCAAA
TCGAACTGAAAGCACTTGCCAGCGAAATAAGTACCCTAGAAAGGAATAAA
TCATGA
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Coding sequence (CDS) from alignment at tig00004390_pilon:1381719..1382474-

>Gchil6653.t1 ID=Gchil6653.t1|Name=Gchil6653.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=756bp|location=Sequence derived from alignment at tig00004390_pilon:1381719..1382474- (Gracilaria chilensis NLEC103_M9 male)
ATGCTCAGTTTGAAAGCATCCTCTCTTGCTGGTGGTCGAACGAGTGTTGT
CCAGCGTGCTTCTAATCGAAACAGAAACATATTAGAGTCGTTGACCGGAG
CTATAAATCACCGACATTGTGCTACCCACCCTGCTCCACTACCCCACGAC
GCGCCACCGAAAAAGAAAAATTCGAAGCCGTCTCAAATGGAAAAGAAATG
TTTAAATGAGAAAGTGGTCGAAGAGAATACGAGGTCTGATACAGGCAAAA
TTCCAGATATCCCATCAAATTCGTGGTCTTCTATTGGATTTGAACCAGAA
GATGCGAACGATCCCAATAAATGGAAGAAGTTTGCATGGAAGTATGTCGG
AGCTGTGCTGCTGTTCTTTGTCTCGTATAAGACTTTACATTGGTATGTTG
ATAGAATTGAGGAAGAAGGCCAACAAAGTAAGAAAAACTTAGAAGAATCG
CGAGAATTTTCGAATGAGCTAAAGAAAGGCGGAACAACTTCTGTGAACAC
GTCCTCAATGCTTCAAAACGCCGTTGAGCAAAACCCTGAGCTAAAACGAA
TGCTGGAGCCGATTACCGAAAGTAGTTTTCAAACTTCATCGGAACTAGAA
GAATTGTACAAATTCCGTGATGAACTTAATGCCAAACTCAGAGAATTGCG
AAAAAGGGGACGCAACCCCGAAATAGATGCAGAAAAGAAGGAAGTTCAAA
TCGAACTGAAAGCACTTGCCAGCGAAATAAGTACCCTAGAAAGGAATAAA
TCATGA
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