Gchil6593.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6593.t1
Unique NameGchil6593.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length430
Homology
BLAST of Gchil6593.t1 vs. uniprot
Match: A0A2V3J2Z2_9FLOR (MOSC_N domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z2_9FLOR)

HSP 1 Score: 340 bits (871), Expect = 8.770e-110
Identity = 201/456 (44.08%), Postives = 274/456 (60.09%), Query Frame = 0
Query:    1 MTHQSGLLLLRAQDASVAIAFASRFALVCIANFAVGFGAGYLYAQYQNLCVSEEKDSHAASEDDKASVTQQAPQSEQFSTVASDSAVEEQHDSLEKASRKLMD--------SSLSDAEPKSPPATPLRTDDEALLTGRVLINPNAESSAFETASQEVHGDLDKLNTASGIEEEQVASVAE--------------------TAGPESTGGEEQKNT---SIVGLQIQPIHGCLPQSVTSLKLSQHGVENHLLYAVSEFTGRYISNEKVPLLSDVSPTILENGHLSLSAPGQSTILHEPKLWGQMKKITIYGVQYEAVDQGDNVSKFFANYLEIPGVRLLLVRPPPLSDGGHRLFKTWPTADRPLLITSEESLTPSKENGELLVGTNLIISSSEPELSKAKIIKIDEYLFEIVNIPREGLDGGIPTQHLLGGGNTLVPVNLGGNECSVQSGQRITIVE 425
            M HQSGLLL+RAQDAS AIAFASRFALVCIANFA GFGAGY++A Y+N C  E+++        K   T+   Q+E+ +                                +  S  EPKSPP TPLRT+D++L    +L NP+A     E +  ++H  + +    +  EE+  A VAE                     A  E+ G + Q++T   S+  L IQPIHGC  QSV SL+L+Q+GVENHL+YAV+EFTGRYIS++KVP L +VSPT+LENG L L AP  + + H+ K WGQMK+ITI GVQYEAVDQGD VSKFF ++LEIPGVRLLL+RPPP++    + F+TWP+ADRPLL+   + + P   N +L +  N+ +S++  E+     IKI +Y FE+V            T++    G+ L+PV+L  +E +++SGQ +T+ E
Sbjct:    1 MAHQSGLLLIRAQDASAAIAFASRFALVCIANFAFGFGAGYIFAHYRNSCEVEQEEETTQVSLSKEEETE--CQAEELNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTPAESSQPEPKSPPGTPLRTEDDSLSENEILTNPDARPLPSEASQVKLHEAMPQFEKTATAEEQVYAHVAEKTDIDDDDTXSEVQESPTLTAADAEADGSQLQESTGEISVAQLHIQPIHGCRAQSVASLRLNQNGVENHLMYAVAEFTGRYISDDKVPALREVSPTVLENGDLYLEAPDVTPLRHQRKSWGQMKRITICGVQYEAVDQGDIVSKFFVDFLEIPGVRLLLIRPPPIAGESGQTFRTWPSADRPLLLAGAD-VVPQNSNSDLPLRPNVGLSNTHSEMESWMQIKIGDYSFELVKTDVSNSTDSTTTENQKHAGHVLLPVDLKRDEWTLRSGQVVTVTE 453          
BLAST of Gchil6593.t1 vs. uniprot
Match: A0A850ANC1_9CHLR (MOSC domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A850ANC1_9CHLR)

HSP 1 Score: 65.5 bits (158), Expect = 2.510e-8
Identity = 67/261 (25.67%), Postives = 114/261 (43.68%), Query Frame = 0
Query:  187 TSIVGLQIQPIHGCLPQSVTSLKLSQHGVENHLLYAVSEFTGRYISNEKVPLLSDVSPTILENGHLSLSAPGQSTILHEPKLWGQMKKITIYGVQ-YEAVDQGDNVSKFFANYLEIPGVRLLLVRPPPLSDGGHRLFKTWPTADR----------PLLITSEESLTP--SKENGELLVGT---NLIISSSEP--------------------ELSKAKIIKIDEYLFEIVNIPREGLDGGIPTQHLLGG--GNTLVPVNLG 409
            T++  L   PI  C    + +  + + G+EN     V     R+++  + P  + V+PT L+NG ++LSAPG  ++    K  G    + I+G     AVDQGD  +++F+ +L+ P VRL+ +     +DG  R        +           P+L+ +EESL    S+ +  L +     NL++   EP                      ++ K+  ID+        P + L  GI  +H LG   G  ++P+N G
Sbjct:    2 TAVSSLTYYPIKACRGFDLRAANVERMGLENDRRLMVISLENRFLTQREYPKFALVTPT-LQNGSITLSAPGFDSLQFPVKASGHTFPVQIWGSHGVPAVDQGDETAEWFSEWLDAP-VRLVRI-----ADGYKRKVNAEYAVNEDDHTGFADGYPILLIAEESLQDLNSRLDSPLPMNRFRPNLVVKGCEPFAEDGWKRIRIGDVEMAPVKPCARCKVTTIDKETLATSKEPLKTL--GIFRRHELGAIFGMNVIPLNEG 253          
BLAST of Gchil6593.t1 vs. uniprot
Match: A0A7W7WWU0_9PSEU (MOSC domain-containing protein n=2 Tax=Saccharothrix violaceirubra TaxID=413306 RepID=A0A7W7WWU0_9PSEU)

HSP 1 Score: 64.7 bits (156), Expect = 4.500e-8
Identity = 41/127 (32.28%), Postives = 67/127 (52.76%), Query Frame = 0
Query:  189 IVGLQIQPIHGCLPQSVTSLKLSQHGVENHLLYAVSEFTGRYISNEKVPLLSDVSPTILENGHLSLSAP--GQSTILHEPKLWGQMKKITIYGVQYEAVDQGDNVSKFFANYLEIPGVRLLLVRPPP 313
            I  L   P+ GC    +T+  L+  G+ +   Y V+   G + +    P L+ ++PT  + G L+L+AP  G++ I H+P      + +T++GV YEA+DQGD  + +  + L  P     LVR PP
Sbjct:    4 ITRLTTYPVKGCAGVDLTTTTLTTAGLRHDRDYMVTSPDGTFRTQRTDPTLALITPTADDTG-LTLTAPDAGETRIPHDPT--APRRTVTLFGVHYEALDQGDEAADWLTHVLRTPS---RLVRVPP 124          
The following BLAST results are available for this feature:
BLAST of Gchil6593.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J2Z2_9FLOR8.770e-11044.08MOSC_N domain-containing protein n=1 Tax=Gracilari... [more]
A0A850ANC1_9CHLR2.510e-825.67MOSC domain-containing protein n=2 Tax=Chloroflexi... [more]
A0A7W7WWU0_9PSEU4.500e-832.28MOSC domain-containing protein n=2 Tax=Saccharothr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005303MOSC, N-terminal beta barrelPFAMPF03476MOSC_Ncoord: 188..301
e-value: 1.5E-11
score: 44.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..429
NoneNo IPR availableSUPERFAMILY141673MOSC N-terminal domain-likecoord: 191..311
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:719525..720814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6593.t1Gchil6593.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 719525..720814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6593.t1 ID=Gchil6593.t1|Name=Gchil6593.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=430bp
MTHQSGLLLLRAQDASVAIAFASRFALVCIANFAVGFGAGYLYAQYQNLC
VSEEKDSHAASEDDKASVTQQAPQSEQFSTVASDSAVEEQHDSLEKASRK
LMDSSLSDAEPKSPPATPLRTDDEALLTGRVLINPNAESSAFETASQEVH
GDLDKLNTASGIEEEQVASVAETAGPESTGGEEQKNTSIVGLQIQPIHGC
LPQSVTSLKLSQHGVENHLLYAVSEFTGRYISNEKVPLLSDVSPTILENG
HLSLSAPGQSTILHEPKLWGQMKKITIYGVQYEAVDQGDNVSKFFANYLE
IPGVRLLLVRPPPLSDGGHRLFKTWPTADRPLLITSEESLTPSKENGELL
VGTNLIISSSEPELSKAKIIKIDEYLFEIVNIPREGLDGGIPTQHLLGGG
NTLVPVNLGGNECSVQSGQRITIVEFRAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005303MOSC_N