Gchil6584.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6584.t1
Unique NameGchil6584.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length972
Homology
BLAST of Gchil6584.t1 vs. uniprot
Match: A0A2V3J2X9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2X9_9FLOR)

HSP 1 Score: 300 bits (768), Expect = 3.070e-83
Identity = 315/1077 (29.25%), Postives = 485/1077 (45.03%), Query Frame = 0
Query:    1 MSRTHKPFREQPSSQDAWQQHNAFYKQFNTPTVRDALAVARAHLQPIFIEHARFAEDCGLPTVTLGFLVDHLQESQIIPPLTSHTFMLGLEICISPDLSSPLR-SPSKNYSNQRIHFDTFVEAFAFSLFCYPIEQRSAANSSASLQLVHDQQVQCFAEDIKTALHRFVDNCGVSAGHNSETVQEI-QADAAENG--------SHFNSVSTSLQSELQNQNIQEQDTGHETQERSIDDLPSTPVQQTDGHQSKLTLNIRKIAAQPLQRSSSGLDNSEPMSPERFYTPRCNFPAASPRRLPVNSSSAASGPHQ--WFTPRHSVAKMSPDVHTAAKMRPGNHFS--------------------PNQPNHFQLATIPRTSSLPKTLQ-----------DTFHG---------SVSSCGDNIITISDSHDDIEA--------LPVENYSNNSRDSTIIETDGGVSSDINAVEDISDSEEEASS----------------PESHFQSPEISDAVSCLPQLSPED---SRKLSF-DTEDEGNISDDSSRYESDEERSTPAVKLAQAEEFGQEIDEPDESSDF-------EGEGNVTRLESVVEGTGSDLQPADSQPICDENGDVECKSQHGLEIEEGIASDTDDYAYISKISSSELLPDRIESANNDIAYGFKSPLFANAVSPGRLEHCRSDS--DFLGESEHEELLYKSGNISESSELSMHSKEAYIRMLNSYIETGSFGNELGSPNGI-------AEDGSAASAPCCLTLESSMEEVFQGDEQTEFLAQDAMSNLQSSD--QTFFNGFVEVESANSSDQQTTTDDTKDT----------EAMVDNNHTTDTVSYVLSKTETETLGSEVRSSHSKINGACGEEIIEPHACAPLQDASESTPNQCVLQPDETSIASEMSAKDASDRNTAGPTPEDFEVVRKPVKARVSFDPLSSSPLSSACTSTSEER-RKSIIQSRVLSPPVRRKLQNLDEMGISSDIIRRSEPSIIVHCNSHERERH-ILAALQENTQLCRMWREEVESRRRSESIYVRLWIFFECFIILVIVVCVVPVVWDSWIARDRFT 967
            MSRT +  R   S+ DAW +H+ F++Q + P V++ LA+ + HL PIF+E+A F E+ G+PTV L FLV+ L++S ++P L SH F LGL++ IS DLSSPL  SPSK+YS QRI FDTFV AFAFSLF YP +     +S++S    + Q    FA  ++           + A H SE+VQ   +A A+EN         S   S  +  + E   + I++      T+E  ++  P +P+ Q D      +  +R    +     +   ++S P +P +++TPR +    +P +    SSS AS P    WFTPR  VA+ S       +  P N F                     P     FQ     +       +Q           D  H          +V +  D     S +H   E         + VEN  + S     I+ D    S   + ++ S   +E  S                P S FQSPEI D  + + Q S ED   SR+LSF D+ED  N  D+SS YE+DEERSTP +KL+QA  +GQ I+EP+ +S+         GE +V R E  +E      +  D  P   +N  VE    +   +E G  SD  D  + +             +A     +  +  LF +  SP + +  R+D   D LGE E  ELL+ +G+ S+SS+LSM ++E Y RML+ YIE G+F +++ S   +       AE    + +            V  GD    F  +D+  + Q S   +  +N     +S ++ DQ     + +++            +V+ N +  ++    + +ET     + +   + +N  CG E              ES  N+   +  E+ I+   +   + ++ T+  TP+DF VVRK +    S + L  S L S CT  S E  R S  +  +       ++      G+    + R EP I+V C+ H      + AAL+E++++CR+ REE+  RR   +   R     E   ++V+VV V  VV +     DRFT
Sbjct:    1 MSRTERTPRAPDSTPDAWTRHDEFHRQLDAPQVQNVLAIVKPHLHPIFLENALFCEETGMPTVPLNFLVEILEQSALVPRLPSHNFKLGLQLAISHDLSSPLHDSPSKHYSEQRIQFDTFVNAFAFSLFSYPFQLPQVDDSTSSQAQENPQDANSFATSLR-----------LGAKHLSESVQSSSKAGASENTNTLYLKEMSKDPSAFSPPKPESLLEGIEQVTDLQTTKETILEQDPQSPIIQDDECSLHDSSTVRDDNTESESIGTFDTESSAPPTPAQYFTPRAHLEKPTPHKT-FTSSSFASSPKNFAWFTPRQGVAEGS-------RTTPSNRFRRLLLTGERKKKQTPFKDSPRPRASEEFQFENNSQRDKEESPVQPMQKAGSGMAIDVTHSKQESEVGVETVRNVQDTTCASSSTHSSQEKSVSSPERKVSVENLEHTSSG---IDGDSLEPSIQKSTKNTSPQGDEIPSQRFSISSNLASPSLPSPSSQFQSPEIRDTFTTVQQSSLEDPSSSRRLSFSDSEDGSNSLDESSPYETDEERSTPEMKLSQASNYGQNIEEPEIASELGSLAESERGESDVHREEGHIESRNFVQEVDDHSP---QNPSVE----NTYHLETGFLSDRSDSIHPTP-----------RAALMGTLFNGEGSLFGDYSSPSKSQLGRNDFGLDSLGEDEPTELLFNNGDQSDSSDLSMRTRETYSRMLDFYIENGNFRSKIDSVTYVEGQAILHAEGDDNSESENAAADPEEQVPVHSGDNYLIF--EDSPIDTQQSQGMEGIYNP--NSQSKSNEDQSQLMSEAEESGKGPDGASKVSVLVERNVSCSSIRRPAATSETH---EDAKGEETAVNVQCGNE--------------ESVYNEGTPKRSESYIS--PAPFKSKEKLTSELTPDDFNVVRKQIDNIPSLEMLVESSLGSVCTKASHETDRFSGGKRAIKGQSDAEQVTPSSARGVFKAEVPR-EPQIVVQCSGHAGNNDAVAAALRESSEVCRLLREELLDRRTKRNGSGRFQSVMEWLFLIVVVVFVTLVVVER--RMDRFT 1011          
The following BLAST results are available for this feature:
BLAST of Gchil6584.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2X9_9FLOR3.070e-8329.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 796..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 796..820
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 936..957
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 958..971
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..935
NoneNo IPR availableTMHMMTMhelixcoord: 935..957

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:697330..700245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6584.t1Gchil6584.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 697330..700245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6584.t1 ID=Gchil6584.t1|Name=Gchil6584.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=972bp
MSRTHKPFREQPSSQDAWQQHNAFYKQFNTPTVRDALAVARAHLQPIFIE
HARFAEDCGLPTVTLGFLVDHLQESQIIPPLTSHTFMLGLEICISPDLSS
PLRSPSKNYSNQRIHFDTFVEAFAFSLFCYPIEQRSAANSSASLQLVHDQ
QVQCFAEDIKTALHRFVDNCGVSAGHNSETVQEIQADAAENGSHFNSVST
SLQSELQNQNIQEQDTGHETQERSIDDLPSTPVQQTDGHQSKLTLNIRKI
AAQPLQRSSSGLDNSEPMSPERFYTPRCNFPAASPRRLPVNSSSAASGPH
QWFTPRHSVAKMSPDVHTAAKMRPGNHFSPNQPNHFQLATIPRTSSLPKT
LQDTFHGSVSSCGDNIITISDSHDDIEALPVENYSNNSRDSTIIETDGGV
SSDINAVEDISDSEEEASSPESHFQSPEISDAVSCLPQLSPEDSRKLSFD
TEDEGNISDDSSRYESDEERSTPAVKLAQAEEFGQEIDEPDESSDFEGEG
NVTRLESVVEGTGSDLQPADSQPICDENGDVECKSQHGLEIEEGIASDTD
DYAYISKISSSELLPDRIESANNDIAYGFKSPLFANAVSPGRLEHCRSDS
DFLGESEHEELLYKSGNISESSELSMHSKEAYIRMLNSYIETGSFGNELG
SPNGIAEDGSAASAPCCLTLESSMEEVFQGDEQTEFLAQDAMSNLQSSDQ
TFFNGFVEVESANSSDQQTTTDDTKDTEAMVDNNHTTDTVSYVLSKTETE
TLGSEVRSSHSKINGACGEEIIEPHACAPLQDASESTPNQCVLQPDETSI
ASEMSAKDASDRNTAGPTPEDFEVVRKPVKARVSFDPLSSSPLSSACTST
SEERRKSIIQSRVLSPPVRRKLQNLDEMGISSDIIRRSEPSIIVHCNSHE
RERHILAALQENTQLCRMWREEVESRRRSESIYVRLWIFFECFIILVIVV
CVVPVVWDSWIARDRFTRVLM*
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