Gchil6575.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6575.t1
Unique NameGchil6575.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length880
Homology
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A2V3J2X0_9FLOR (AT-rich interactive domain-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2X0_9FLOR)

HSP 1 Score: 800 bits (2065), Expect = 2.920e-276
Identity = 400/649 (61.63%), Postives = 506/649 (77.97%), Query Frame = 0
Query:  178 PLQKDGRHTIICGRLPDNHPYATAARRLGRYLISNRYRGVQECTSAIERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLVHDKMPEDVNRKLDMKRMAMEEKLKERKAAERLARMTASKRRSSGALDLLLDVGDCIDLVDENGYLDRDDPRLKRILLAVSDRPRITLNYLDLIVSNDIDDLLVPELEDTSTD---DESFHIVFHDVIQMDEHEQVETGADVVLLALAECLPSCTLRLDANFERPKDLGLGKAICILPFCSPNMKRALGLLISAVIKASKLPSFLLLADKNSSHGFIDGLFYLLHRYLRHESSEDEEY--EACETDVLSAAYCALSVIQMLVDEEQNRPKIISNVGFRYAIGRFLGYEDSSRSFLLVMLDIITKCCTMMVDLLSERDMDLFVSSLVQRLEMATGLDPEAPLEHEVKKGLDVPPDYEISSKVLPILVTLARKMGIKCRNSGRLIELCVRMLHCQERIADNTNLALIVHTIAERFPNMIASNRDLVRGVLKLVRDATCVDIAAETLIIINRTLPVRELVLESGLFSGWKQCAADRDAPLTHLVESLSDETEQAHRNHFVADIRISASGGDERE 821
            PLQKDGRHTIICGRLPDN+PYA AAR LG+ ++S ++ G Q C    ER+ NF KDWKAFHEELLG  PK PVIGGGELDI+SL HEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYE+LLFYYE KLVHD+MP+DV+RKLDMKRMAMEEK +ERKA ERLARM  +K+R+ G++DLL+D+GDC D+V E+G  +R+DPR+KRI+LAVS+RP +T+NYLDLIV  DI+DL++PE  DT  D   DES  ++  + +QMD+ +QV++G DVV LALAECL   +L++  +    KDLGL +A+C LPF SPNM RALGL+I  V+K SK P  LLL+++ S++G +DGLFYL+HRY R +    +EY   A   +VLSAA+C+LSVIQ ++ E+QNR K+ISNVGFR+ + RFLG E  +RSFLLV+LDIIT C T+MV+LL + DMDLF+SSL++RLE+ATG+DPE  +E E++K ++V PDYE+SSKVLPILVTL R MG K RN GRL+ LCVR++HCQER+ADNT+LAL++ T+ ER P ++A +++ VRGV KL+RD TCVD+AAE LIIINR   +RE  +ESGLF  WK C+ + D  L H V+   +      R+     + +   GGDE E
Sbjct:  240 PLQKDGRHTIICGRLPDNNPYAIAARGLGQKMVSKKHSGFQTCEVESERRLNFLKDWKAFHEELLGYVPKRPVIGGGELDIFSLAHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYERLLFYYEGKLVHDRMPQDVSRKLDMKRMAMEEKERERKAVERLARMMLNKKRNHGSVDLLIDIGDCTDVV-ESGCFNREDPRVKRIMLAVSERPDVTMNYLDLIVGQDIEDLMLPEWNDTCDDTDSDESLRVMLREALQMDQQDQVQSGTDVVFLALAECLQPSSLQVTGSSAMAKDLGLARALCTLPFSSPNMSRALGLMIMIVMKISKTPLLLLLSERKSTYGLLDGLFYLIHRYTRIKRGGQDEYGYSASNDEVLSAAFCSLSVIQAMLKEQQNRSKVISNVGFRHVVARFLGGELLNRSFLLVILDIITTCTTLMVELLGDADMDLFLSSLLRRLELATGVDPEVAVEEEIEKEIEVAPDYEVSSKVLPILVTLTRHMGSKSRNVGRLLALCVRLMHCQERVADNTSLALVIFTVTERLPKIVAKDKEFVRGVFKLIRDPTCVDVAAEALIIINRVCSIREFAVESGLFEAWKTCSENEDNALAHFVDETQNSAGTESRDAKALSVTVVKLGGDETE 887          
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A1X6PJV0_PORUM (ARID domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJV0_PORUM)

HSP 1 Score: 115 bits (287), Expect = 2.510e-22
Identity = 67/152 (44.08%), Postives = 91/152 (59.87%), Query Frame = 0
Query:  178 PLQKDGRHTIICGRLPDNHPYATAARRLGRYLISNRYRGVQECTSAIE-------------RKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLV 316
            PL+K+GR+ +I GRLP + PY  A   +G   +S +  G+                     R+  F  D  AF  E    + K+PV+GGG L+I+ L  EV  LGGV NV+ KRAFRVVA +L+LP++CTSAA VL+NA+E LL+ YE+KLV
Sbjct:  532 PLRKEGRNLVITGRLPTSSPYQQALDSVGIRFVSAKLSGIGPGAPPXXXXXXXXXXXGVGGREAAFLADHAAFMFERGQASFKVPVVGGGPLNIFRLFVEVCKLGGVENVLNKRAFRVVAGELDLPRTCTSAAFVLRNAHESLLYAYEQKLV 683          
BLAST of Gchil6575.t1 vs. uniprot
Match: M2XJD9_GALSU (ARID/BRIGHT DNA binding domain containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XJD9_GALSU)

HSP 1 Score: 92.0 bits (227), Expect = 1.710e-15
Identity = 46/120 (38.33%), Postives = 77/120 (64.17%), Query Frame = 0
Query:  205 LGRYLISNRYRGVQECTSAIERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLVHDKMPEDV 324
            +G Y IS   R +++   + +R+ NF +D  A+  E+     K+P +GG  LD++ L  EV+  GGV +V+  R F+ +++ L LPK+CT+AA VL+ +YEK+L++YE+K V  +  E+V
Sbjct:   31 VGTYFIS---RALRDSVPSRDRRRNFLEDLSAYMNEIGRGNFKIPTLGGFTLDVFILYQEVVRRGGVQHVIDNREFKEISKILRLPKTCTAAAFVLRESYEKILYFYEQKHVFGRSAEEV 147          
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A7S3ELY9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELY9_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 8.160e-15
Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 0
Query:  198 YATAARRLGRYLISNRYRGVQECTSAIERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLV 316
            Y      +GR  IS + +     + +   K++F  D K F  E+  +  K+P +GG  L+IY L  EV+  GG+ NV++ RAF++V ++L LP+SCTSAA +L+ +YEK+L+ YE+  V
Sbjct:   38 YKAVVPEIGRRFISEQMKNGSMGSGS--PKDDFLADHKHFMTEIGELNFKVPTLGGSPLNIYQLFVEVMDQGGLNNVIETRAFKIVTRKLVLPRSCTSAAYMLRQSYEKILYQYEQHFV 154          
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A7S3A7B0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7B0_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 4.090e-14
Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 0
Query:  198 YATAARRLGRYLISNRYRGVQECTSAIERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLV 316
            Y      +GR  IS + +     + +   K++F  D K F  E+  +  K+P +GG  L+IY L  EV+  GG+ NV++ RAF++V ++L LP+SCTSAA +L+ +YEK+L+ YE+  V
Sbjct:   38 YKAVVPEIGRRFISEQMKNGSMGSGS--PKDDFLADHKHFMTEIGELNFKVPTLGGSPLNIYQLFVEVMDQGGLNNVIETRAFKIVTRKLVLPRSCTSAAYMLRQSYEKILYQYEQHFV 154          
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A2V3J548_9FLOR (Armadillo repeat-containing protein LFR n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J548_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 6.000e-14
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 0
Query:  225 ERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLVHDKMPED 323
            +R+ +F  D   F  E+ G   KL  IGG ELD+Y L   VL  GG+ +V+  RAF++VAQ LELPK+CTSAA +L+  YEKLL+ YE+K V ++ P +
Sbjct:  149 DRRTDFITDHYRFMNEI-GRPFKLRRIGGAELDLYGLYKAVLERGGLQSVICMRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHE 246          
BLAST of Gchil6575.t1 vs. uniprot
Match: UPI001E1D2F20 (uncharacterized protein LOC123543557 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2F20)

HSP 1 Score: 80.9 bits (198), Expect = 1.120e-12
Identity = 51/122 (41.80%), Postives = 68/122 (55.74%), Query Frame = 0
Query:  198 YATAARRLGRYLISNRYRGVQECTSAIERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLVHDK 319
            Y  AA   G   +S   R VQ      +R+ +F  D + F  E      ++  IGG  LDIY L   VL  GGV  V   RAF++VA+ L LPKSCTSAA+VL+ +Y + L+ YE+K V D+
Sbjct:   10 YRAAAGDAGLRFVSAEMRSVQPTG---DRRQDFLNDHEYFMREN-NQDLRVRTIGGARLDIYGLYVNVLERGGVQAVTTNRAFKMVARALNLPKSCTSAATVLRTSYMEQLYLYEQKHVFDR 127          
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A1X6P609_PORUM (ARID domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P609_PORUM)

HSP 1 Score: 82.4 bits (202), Expect = 2.320e-12
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0
Query:  197 PYATAARRLGRYLISNRYRGVQECT---SAIERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLVHDKMP 321
            PY TAA   G   +S             S    + ++  D  AF  +      ++P + G   DIY+L   VL LGG+ +V+  RAF++VA+QL LPKSCTSAA VL+  YE+LLF YE+  V  + P
Sbjct:   38 PYTTAADNAGTVFVSEALMASPPXXXGPSPASVRRSWAADHAAFMADAGRPDFRVPTVAGSPCDIYALYVAVLRLGGLHSVMANRAFKLVARQLALPKSCTSAAYVLRTTYERLLFDYEQASVWGRRP 165          
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A7S0G5U3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5U3_9RHOD)

HSP 1 Score: 73.9 bits (180), Expect = 3.530e-12
Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 0
Query:  251 IGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEEKLVHDKMPE 322
            +GG  L+IY L  EV+  GG+ NV++ RAF++V ++L LP+SCTSAA +L+ +YEK+L+ YE+  V  + P+
Sbjct:    2 LGGSPLNIYQLFVEVMDQGGLNNVIETRAFKIVTRKLVLPRSCTSAAYMLRQSYEKILYQYEQHFVFGRDPQ 73          
BLAST of Gchil6575.t1 vs. uniprot
Match: A0A507ERG4_9FUNG (ARID domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507ERG4_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 8.310e-6
Identity = 38/114 (33.33%), Postives = 55/114 (48.25%), Query Frame = 0
Query:  200 TAARRLGRYLISNRYRGVQECTSAIERKNNFFKDWKAFHEELLGITPKLPVIGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVLKNAYEKLLFYYEE 313
            T  R LGR      Y    E T   E+   F K  + F+        + PV+GG  LD+Y +   V+  GG   V   R ++ V     LP +CT+AA V+KN Y+K L+ +E+
Sbjct:    6 TPFRSLGRPRAKAEYEDAIERTPEYEQ---FMKQLEDFNRAQGVSLQREPVLGGKRLDLYRIYRWVVEAGGYEQVTAARGWKKVTDPFNLPATCTNAAYVVKNLYQKYLYNWEQ 116          
The following BLAST results are available for this feature:
BLAST of Gchil6575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3J2X0_9FLOR2.920e-27661.63AT-rich interactive domain-containing protein 2 n=... [more]
A0A1X6PJV0_PORUM2.510e-2244.08ARID domain-containing protein n=1 Tax=Porphyra um... [more]
M2XJD9_GALSU1.710e-1538.33ARID/BRIGHT DNA binding domain containing protein ... [more]
A0A7S3ELY9_9RHOD8.160e-1538.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A7B0_9RHOD4.090e-1438.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3J548_9FLOR6.000e-1448.48Armadillo repeat-containing protein LFR n=1 Tax=Gr... [more]
UPI001E1D2F201.120e-1241.80uncharacterized protein LOC123543557 n=1 Tax=Merce... [more]
A0A1X6P609_PORUM2.320e-1239.06ARID domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0G5U3_9RHOD3.530e-1247.22Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A507ERG4_9FUNG8.310e-633.33ARID domain-containing protein n=2 Tax=Spizellomyc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01014ARID_2coord: 221..312
e-value: 4.0E-17
score: 72.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 829..879
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 845..864
NoneNo IPR availablePANTHERPTHR46691HIGH MOBILITY GROUP B PROTEIN 9coord: 224..381
NoneNo IPR availablePANTHERPTHR46691:SF1HIGH MOBILITY GROUP B PROTEIN 9coord: 224..381
NoneNo IPR availableCDDcd16100ARIDcoord: 227..312
e-value: 4.43108E-20
score: 83.5612
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 225..317
e-value: 8.4E-15
score: 65.2
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 227..312
e-value: 3.6E-13
score: 50.0
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 224..316
score: 20.474411
IPR036431ARID DNA-binding domain superfamilyGENE3D1.10.150.60coord: 208..336
e-value: 2.6E-21
score: 77.4
IPR036431ARID DNA-binding domain superfamilySUPERFAMILY46774ARID-likecoord: 222..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:670998..673714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6575.t1Gchil6575.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 670998..673714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6575.t1 ID=Gchil6575.t1|Name=Gchil6575.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=880bp
MLEKSDIRRMPAASHALVHEAAFDSGYTVHSQEVEHFDSTGHSLKDLSTG
AESKLIPHPTTISSVAECQGVIPLHLLEPMQYSETSQTQSHPHLLQSNHP
VHGITQGNHFAVSLPGDPNNILGRYSHSHSQKENNVSLRHPECPTVGEVR
DYNQELTQYSHQEGFRINILSLDVVDCPLQKDGRHTIICGRLPDNHPYAT
AARRLGRYLISNRYRGVQECTSAIERKNNFFKDWKAFHEELLGITPKLPV
IGGGELDIYSLMHEVLLLGGVLNVVKKRAFRVVAQQLELPKSCTSAASVL
KNAYEKLLFYYEEKLVHDKMPEDVNRKLDMKRMAMEEKLKERKAAERLAR
MTASKRRSSGALDLLLDVGDCIDLVDENGYLDRDDPRLKRILLAVSDRPR
ITLNYLDLIVSNDIDDLLVPELEDTSTDDESFHIVFHDVIQMDEHEQVET
GADVVLLALAECLPSCTLRLDANFERPKDLGLGKAICILPFCSPNMKRAL
GLLISAVIKASKLPSFLLLADKNSSHGFIDGLFYLLHRYLRHESSEDEEY
EACETDVLSAAYCALSVIQMLVDEEQNRPKIISNVGFRYAIGRFLGYEDS
SRSFLLVMLDIITKCCTMMVDLLSERDMDLFVSSLVQRLEMATGLDPEAP
LEHEVKKGLDVPPDYEISSKVLPILVTLARKMGIKCRNSGRLIELCVRML
HCQERIADNTNLALIVHTIAERFPNMIASNRDLVRGVLKLVRDATCVDIA
AETLIIINRTLPVRELVLESGLFSGWKQCAADRDAPLTHLVESLSDETEQ
AHRNHFVADIRISASGGDERETSFDENIVNQSGTYYADEGATEAKFSSED
DEDETDEEGESDDDSSFGSSMHDGPTDVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001606ARID_dom
IPR036431ARID_dom_sf