Gchil6565.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6565.t1
Unique NameGchil6565.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length354
Homology
BLAST of Gchil6565.t1 vs. uniprot
Match: A0A2V3IMR7_9FLOR (Krueppel-like factor 16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMR7_9FLOR)

HSP 1 Score: 229 bits (583), Expect = 5.720e-69
Identity = 191/333 (57.36%), Postives = 215/333 (64.56%), Query Frame = 0
Query:   38 KSPETHVCPYPTCAKSFSKKYNLKAHLRLHTGEQPFECDRXXXXXXXXXXXXXXXXTVWHSRKDKSAASSSQPQXXXXXXXXXXXXXXXXXXXXXXSAGARACSVVPTGDAPACTVACSGSRAAN------------RKRPRAASARRAVS-ALRTASSSVDLSKLPN--STKR--SKPPAKKKKLANGEGRIQRVQHGMPHVVLEEQTVLAVREHEQCYLPPPCSPLTDAASFFDCSSPTESAVESQPLLQLDDLSEHVFSLDVRHSDAAPLQMNIGLEDVVSIMDDTDHTG-LFSACGGGSCGAFAGLETRFGPLDLDNLPGFGMNTKGEG 352
            +S ETHVCPYP+CAKSFSKKYNLKAHLRLHTGEQPFECDRXXXXXXXXXXXXXXXXTVWHSRKDK+  S++ P XXXXXXXXXXXXXXXXXXXXXX                    ACS    AN            RKRPR +    A    L T++SSVDL+KL N  +++R  SKPP+KK+K             G P      Q  +          P P SPLTDAASFFD SS T+S ++SQ +L+LD+ SEHV SLDVRH+D   LQM IGLEDV SIMDD D  G LFS  GG +C     L+TRFGP DLDNL  FGMNT  EG
Sbjct:   32 RSSETHVCPYPSCAKSFSKKYNLKAHLRLHTGEQPFECDRXXXXXXXXXXXXXXXXTVWHSRKDKT--STANPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTACSSRPTANXXXXXXXXXXXNRKRPRTSRPSSAAPRTLPTSTSSVDLTKLGNFNNSRRTCSKPPSKKQKKC-----------GKPSSQPASQQHIVQLAPSHNVFPAPSSPLTDAASFFDYSSATDSPMDSQRMLELDEFSEHVLSLDVRHADGPCLQMQIGLEDVASIMDDADQCGGLFSQYGGATCANLTPLDTRFGPFDLDNLQAFGMNTTVEG 351          
BLAST of Gchil6565.t1 vs. uniprot
Match: R7Q9K5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9K5_CHOCR)

HSP 1 Score: 69.3 bits (168), Expect = 1.990e-9
Identity = 113/356 (31.74%), Postives = 146/356 (41.01%), Query Frame = 0
Query:   41 ETHVCPYPTCAKSFSKKYNLKAHLRLHTGEQPFECDRXXXXXXXXXXXXXXXXTVWHSRKDKSAASSSQPQXXXXXXXXXXXXXXXXXXXXXXSAGA------------RACSVVPTGDAPAC--------TVACSGSRAANRKRPRAASARRAVSALRT--ASSSVDLSK--LPNST----------------------KRSKPPAKKKKLANGEGRIQRVQHGMPHVVLEEQTVLAVREHEQCYLPPPCSPLTDAASFFDCSSPTESAVESQPLLQLDDLSEHVFSLDV----RHSDAAPLQMNIGLEDVVSIMDDTDHTGLFSACGGGSCGAFAGLETRFGPLDLDNLPGFGM 346
            ETH CPY  C KSFSKKYNLKAHLRLHT         XXXXXXXXXXXXXXXX    +RKD  + SS                           A +            +  SVVP      C        TVA + S    +KRPR +S+R+  +   T  +SSS D+S   +P+ T                      K S+P +KK++  + +             V +E  ++               P  DA    D  S   S V S+  L    L   +FS DV      S+  PL +  G EDV +++      G+F      SC    GL+TRFG  DLD+ P F M
Sbjct:   53 ETHTCPYDDCKKSFSKKYNLKAHLRLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRKDHGSISSPGDSKAADASKKDLVPKSPSSPTVAGVAKSTSPAKAKSHDAKQGKSVVPASSTNTCAQTKTEPATVAAASS-INKKKRPRNSSSRKGKTPASTVQSSSSTDVSSDTVPSLTEFCFSTDTAADSKTTTAKTTKRKTSRPASKKRRTIDNKD------------VKDETKMMEASS----------PPAVDAD--LDIFSSPGSPVTSESELSERSLGMDLFSCDVFPSLMGSEGEPLPL--GTEDVEALLSGGGDDGMFGYVSP-SCATLGGLDTRFGTFDLDSFPNFCM 380          
BLAST of Gchil6565.t1 vs. uniprot
Match: UPI001E1D443D (zinc finger protein ZXDC-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D443D)

HSP 1 Score: 65.1 bits (157), Expect = 3.460e-8
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:   38 KSPETHVCPYPTCAKSFSKKYNLKAHLRLHTGEQPF 73
            +SP  H CP  +C K+FSKKYNLKAHLRLHTGEQPF
Sbjct:   24 ESPSLHCCPIKSCGKAFSKKYNLKAHLRLHTGEQPF 59          
BLAST of Gchil6565.t1 vs. uniprot
Match: A0A7S0XIR8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIR8_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 4.010e-6
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 0
Query:   43 HVCPYPTCAKSFSKKYNLKAHLRLHTGEQPFEC 75
            +VCP P+C K F K+YNLKAHLR+H+GE+PF C
Sbjct:   35 YVCPLPSCDKRFGKRYNLKAHLRIHSGERPFSC 67          
BLAST of Gchil6565.t1 vs. uniprot
Match: A0A197JPQ0_9FUNG (Uncharacterized protein (Fragment) n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197JPQ0_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 4.070e-6
Identity = 18/32 (56.25%), Postives = 28/32 (87.50%), Query Frame = 0
Query:   45 CPYPTCAKSFSKKYNLKAHLRLHTGEQPFECD 76
            CP+P C KSF++ +NL+AH+R+HT E+P++CD
Sbjct:    1 CPHPNCNKSFTRPFNLRAHMRVHTAERPYKCD 32          
BLAST of Gchil6565.t1 vs. uniprot
Match: T1EH90_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EH90_HELRO)

HSP 1 Score: 53.9 bits (128), Expect = 7.890e-6
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 0
Query:   42 THVCPYPTCAKSFSKKYNLKAHLRLHTGEQPFEC 75
            +H CP P C K++SK  +LKAHLR HTGE+P++C
Sbjct:    6 SHACPSPGCPKTYSKSSHLKAHLRTHTGEKPYQC 39          
BLAST of Gchil6565.t1 vs. uniprot
Match: A0A7S0BBD3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BBD3_9RHOD)

HSP 1 Score: 54.7 bits (130), Expect = 8.940e-6
Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = 0
Query:   45 CPYPTCAKSFSKKYNLKAHLRLHTGEQPFECD 76
            CP+  CAK FSKKYNLK H+R+HT E+P+ C+
Sbjct:   39 CPFDNCAKRFSKKYNLKTHIRIHTKERPYVCE 70          
The following BLAST results are available for this feature:
BLAST of Gchil6565.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IMR7_9FLOR5.720e-6957.36Krueppel-like factor 16 n=1 Tax=Gracilariopsis cho... [more]
R7Q9K5_CHOCR1.990e-931.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D443D3.460e-875.00zinc finger protein ZXDC-like n=1 Tax=Mercenaria m... [more]
A0A7S0XIR8_9RHOD4.010e-666.67Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A197JPQ0_9FUNG4.070e-656.25Uncharacterized protein (Fragment) n=2 Tax=Mortier... [more]
T1EH90_HELRO7.890e-658.82Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
A0A7S0BBD3_9RHOD8.940e-662.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 73..97
e-value: 6.8
score: 14.8
coord: 43..67
e-value: 0.0051
score: 26.0
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 43..67
e-value: 2.0E-4
score: 21.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 75..97
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 45..67
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 43..72
score: 14.959991
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 73..102
score: 10.886503
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 68..99
e-value: 3.9E-9
score: 38.2
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 26..67
e-value: 4.1E-12
score: 47.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 43..100
NoneNo IPR availablePANTHERPTHR19818:SF143LD47926P-RELATEDcoord: 43..100
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 53..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:641986..643047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6565.t1Gchil6565.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 641986..643047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6565.t1 ID=Gchil6565.t1|Name=Gchil6565.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=354bp
MVARSSSSSLSPSTSSSSTTTTCLTNSSNKSSASSSSKSPETHVCPYPTC
AKSFSKKYNLKAHLRLHTGEQPFECDRPNCNKKFKWRSSLSSHTVWHSRK
DKSAASSSQPQPPQPPQPPQPPPPPHTTVTAATSAGARACSVVPTGDAPA
CTVACSGSRAANRKRPRAASARRAVSALRTASSSVDLSKLPNSTKRSKPP
AKKKKLANGEGRIQRVQHGMPHVVLEEQTVLAVREHEQCYLPPPCSPLTD
AASFFDCSSPTESAVESQPLLQLDDLSEHVFSLDVRHSDAAPLQMNIGLE
DVVSIMDDTDHTGLFSACGGGSCGAFAGLETRFGPLDLDNLPGFGMNTKG
EGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf