Gchil6561.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6561.t1
Unique NameGchil6561.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length417
Homology
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BLAST of Gchil6561.t1 vs. uniprot
Match: A0A2V3IY53_9FLOR (FA_FANCE domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY53_9FLOR)

HSP 1 Score: 393 bits (1009), Expect = 1.570e-131
Identity = 214/407 (52.58%), Postives = 287/407 (70.52%), Query Frame = 0 
Query:   12 IWEKLLTAPSTSEAIERASHHSILDIQQTPLPIPFDEMSPNAQENLRAISRAFEVSLGGIEVQGWNLWTDGARGMDDWQMAILEIKQSRPRPEEDGAPQSSLTISDSKTLETEKSQAVENEITPASNLAGESEEKKRKHLLNKSSHGSGTHSSLKVSGNQKKGLDAEVKKNAELIRNWALFSPHTEPSQVAIDVLLGSAETSRILQYIVPNGSTPLMRAAVISCFTERIGSSAANVMMEETIIPYVQILKAPAPREVMTAVVNFCTFHWRAALGLYTHIAHSDQKVNGAIAELLARVAAGISPEAALSALKEYSRGTWGEDGIRVIEALMAKSKDQPGVVSAIAPSLEKNVIGMEKSVRFGKLLFTMVKEFPVVENEYEQVLESVAARSKVFLAKRALSYMK--NKK 416
            +W+KLLTA STSEAI+ A+   + ++Q+TPLP+PF E+SPNAQ+NL+A+ RA E S GGI+  GW+LW D A  +++W  AI  IKQ    P +    +  L   D    E   S + +N ++ A NLA  S+    K    K +       S + +  + + + AE +K+AE IRNWA  S HT P Q AID+L  S +  +ILQ +VP+  +PL+RAAVISCFT++IG++ AN++M  TI+PYVQ L++PAPREVM +VV FC+FHWR+A+ LY H A  +Q+VNGA+AELL+RV + +  EAALSALKEY  G WGEDGIRV+E L+++ K+QP V+  + PSLEKNVIGMEKSVRFGKLLFT+VK+ P +EN+Y Q+ ESVA RSKVFLAKRALS ++  NKK
Sbjct:    1 MWQKLLTASSTSEAIQLATLVPLRELQRTPLPVPFSELSPNAQKNLKALCRALETSFGGIQDDGWDLWKDAAHDINEWDKAIEIIKQKPLEPGQYDLSEVQLP-QDMGKKEATFSISGKNGLSDARNLADGSDISTSKPSSMKDTDAI---MSKRPAREKNESISAEERKSAERIRNWAQVSSHTTPPQDAIDLLSKSTDLLQILQIMVPHDVSPLVRAAVISCFTDKIGTTMANLLMNATILPYVQTLESPAPREVMKSVVRFCSFHWRSAITLYKHFAQGNQRVNGAVAELLSRVGSELKAEAALSALKEYRTGVWGEDGIRVVETLLSRCKEQPDVLELLMPSLEKNVIGMEKSVRFGKLLFTIVKDLPGIENQYAQLFESVAERSKVFLAKRALSLLRTNNKK 403
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BLAST of Gchil6561.t1 vs. uniprot
Match: R7QA35_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA35_CHOCR)

HSP 1 Score: 140 bits (352), Expect = 1.570e-36
Identity = 70/147 (47.62%), Postives = 101/147 (68.71%), Query Frame = 0 
Query:  269 MTAVVNFCTFHWRAALGLYTHIAHSDQKVNGAIAELLARVAAGISPEAALSALKEYSRGTWGEDGIRVIEALMAKSKDQPGVVSAIAPSLEKNVIGMEKSVRFGKLLFTMVKEFPVVENEYEQVLESVAARSKVFLAKRALSYMKNK 415
            M A+V F   HWR A+ LY  +   +  V+GA+AE+L R A  ++P  AL  L+ +   TWGEDGIRV+EAL+ K K++      +  +LEKNV+G+EKSVRFGKLLFT+V++ P V + + + +ES+ +RS VFLAKRAL+ ++ K
Sbjct:    1 MQALVAFAERHWRVAVRLY-RVCAEESPVSGAVAEVLVRTAPVVAPAGALKGLRAWCEATWGEDGIRVVEALLGKCKNEEDAARLVVLALEKNVVGLEKSVRFGKLLFTVVRDLPGVADNFREQMESICSRSNVFLAKRALTVLRAK 146
The following BLAST results are available for this feature:
BLAST of Gchil6561.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IY53_9FLOR1.570e-13152.58FA_FANCE domain-containing protein n=1 Tax=Gracila... [more]
R7QA35_CHOCR1.570e-3647.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.480coord: 212..414
e-value: 8.1E-23
score: 83.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..169
IPR021025Fanconi Anaemia group E protein, C-terminalPFAMPF11510FA_FANCEcoord: 237..407
e-value: 1.1E-7
score: 31.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:632303..633553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6561.t1Gchil6561.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 632303..633553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6561.t1 ID=Gchil6561.t1|Name=Gchil6561.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=417bp
MVDNMTTMSSSIWEKLLTAPSTSEAIERASHHSILDIQQTPLPIPFDEMS
PNAQENLRAISRAFEVSLGGIEVQGWNLWTDGARGMDDWQMAILEIKQSR
PRPEEDGAPQSSLTISDSKTLETEKSQAVENEITPASNLAGESEEKKRKH
LLNKSSHGSGTHSSLKVSGNQKKGLDAEVKKNAELIRNWALFSPHTEPSQ
VAIDVLLGSAETSRILQYIVPNGSTPLMRAAVISCFTERIGSSAANVMME
ETIIPYVQILKAPAPREVMTAVVNFCTFHWRAALGLYTHIAHSDQKVNGA
IAELLARVAAGISPEAALSALKEYSRGTWGEDGIRVIEALMAKSKDQPGV
VSAIAPSLEKNVIGMEKSVRFGKLLFTMVKEFPVVENEYEQVLESVAARS
KVFLAKRALSYMKNKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021025Fanconi_anaemia_gr_E_prot_C