Gchil6529.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6529.t1
Unique NameGchil6529.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length658
Homology
BLAST of Gchil6529.t1 vs. uniprot
Match: A0A2V3J5J9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5J9_9FLOR)

HSP 1 Score: 902 bits (2330), Expect = 0.000e+0
Identity = 459/661 (69.44%), Postives = 545/661 (82.45%), Query Frame = 0
Query:    1 MGTNPQTTPSFVSRFRSWRRGSFNNNVLPLPDFIPYPDRAQAISTPCSPTSPIRNNSNEVSTQPVSKKKNSIFQNNRAQLSLPSRRC----GKGLDGK-DEDVHKVEEVSKVRDLEAQLPNRSHRFKYNPEGLGQRLLVSARLKSKLETSKIIRIPFSKSYKYTLIFALLFTGAFLTPQMLPKWIGFEWASPEDLCQSPESKIVEIQQQLINFTSLRESKQFLKQQEYTLNCMNRSAADFYHGENGSLPRFLWPHECDSEKARISLNETTCVEQKTNVCKRVNFFARIFASISGDCVQKVGPELCVESTNVERSESLYELEKERNALSQNLTEIDTEPIVSTAESKINEVITRLMTQIDLAADCFIVYSIVAVMVGIPLIISKREKTSRVMSATLGLTKMTFVMVFVILLSLYDSFFLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMCNNISYIEQQSDYVLQKMDTVYYDTRLFGHCKDDNRELAIHPKLEAMDEIRKLYRGGNISNPGVCNATELDERTSVAPDNERSSKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKQKTMLNAEDETAIRRFARDKHLLPLIVFSVLLLAELVLFGYSIYTTINGANELPTQNS-TLPLTPAPEWRCPSSLG 655
            MG  P      +SRF  WRR   N  +L LP+ IP+PDR        + +SP    SN+ S  P  + +      + A +S P RR      +G +   D     VEE    RD+EAQ P +SHRFKY+P G GQRLLVS RLK+KLE+SKIIR+P+++S+KYTL+  LLFTGAFLTPQ+LPKWIGFEWASPEDLCQSP+ K+ EI +Q++N T +R++K F++QQEYTL+CMNRSAADFYHG+NG  PRFLWP ECDSEKAR++LNETTCVEQKTN+CKRVNFFAR+F S+SG+CVQK GP+LCVESTN ERSESLY+LEKERNA  QN T+I TEPIV+TAESKI+++I RLM Q+DLAADCFIVYS+V+V+VGIPL+ISKREKTSRV+ ATLGLTKMTFVMVF+ILLSLYDS FLIF+DTDFPR+FQNFLNDPCYVNP FS++RVGMIVD+CNNISYI+QQSDY+LQ+MD VYYDTRLFGHCKDD+RELA+HPKL+AMD+IRK+YR GNISNPG+CNATELD RTSVAP+NER+SKWKAL+GSGVVAQL LKI+FT WIIH L+F+EPMVLH+GKVELWG+K +T L+ EDE AIRRFARDKHLLPLI FS LL  E+ LFGYSIYTTI+GA E+ T N+ T+PLT  PE RCPS LG
Sbjct:    1 MGATPPENSPKISRFLPWRRVP-NRRILSLPEAIPFPDRIAPNVGSSNASSPSVRFSNQ-SDGPRGRHRMEEAPFSDA-ISQPFRRLPLLQNRGSESNFDHQKGIVEEPDNERDVEAQHPPQSHRFKYDPPGWGQRLLVSTRLKNKLESSKIIRVPYARSHKYTLVLTLLFTGAFLTPQLLPKWIGFEWASPEDLCQSPDDKLNEIHRQVLNMTLIRDAKHFIEQQEYTLDCMNRSAADFYHGKNGKPPRFLWPKECDSEKARMALNETTCVEQKTNICKRVNFFARLFVSVSGNCVQKTGPDLCVESTNAERSESLYQLEKERNAFEQNFTDIKTEPIVATAESKISQIINRLMLQVDLAADCFIVYSVVSVLVGIPLVISKREKTSRVVGATLGLTKMTFVMVFIILLSLYDSAFLIFRDTDFPRMFQNFLNDPCYVNPDFSARRVGMIVDVCNNISYIDQQSDYILQRMDRVYYDTRLFGHCKDDDRELAVHPKLKAMDKIRKMYREGNISNPGICNATELDTRTSVAPENERTSKWKALMGSGVVAQLLLKIVFTGWIIHFLSFIEPMVLHSGKVELWGVKSRTSLSEEDEKAIRRFARDKHLLPLIFFSTLLAIEIALFGYSIYTTISGAGEIQTHNNKTMPLTKPPELRCPSVLG 658          
BLAST of Gchil6529.t1 vs. uniprot
Match: R7QPE7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPE7_CHOCR)

HSP 1 Score: 387 bits (995), Expect = 1.640e-125
Identity = 204/439 (46.47%), Postives = 283/439 (64.46%), Query Frame = 0
Query:  228 MNRSAADFYHGENGSLPRFLWPHECDSEKARISLNETTCVEQKT-NVCKRVNFFARIFASISGDCVQKVGPELCVESTNVERSESLYELEKERNALSQNLTEIDTEPIVSTAESKINEVITRLMTQIDLAADCFIVYSIVAVMVGIPLIISKREKTSRVMSATLGLTKMTFVMVFVILLSLYDSFFLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMCNNISYIEQQSDYVLQKMDTVYYDTRLFGHCKDDNRELAIHPKLEAMDEIRKLYRGGNISNPGVCNATELDERTSVAPDNERSSKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKQKTM--------------LNAEDETAIRRFARDKHLLPLIVFSVLLLAELVLFGYSIYTTINGANELPTQNSTLPLTPAPEWRCP 651
            MN SA  FY   +    RF WPHEC  EKA  SL +  CV   T +VC  +    +IFAS++  C     P+ CV++ + ER+E L  LE+E NA   N T  +T+PIV TA  K+ E++ R++ Q+D+A+D +I YSIVA+++G+PLII KREK SR++ AT G+TK+TF++V V+ LS+Y+SFFLI ++TDF R+F+NF NDPCYV+  FS +RV +I+  CNN++ +   S Y LQ MD VY+ TR F  CKD  RE + HP+   MD +R  YR G+   PG CNAT LD  TS AP++   SK +ALLGSGVVAQL LK I TSW++H++A+ EPM++HNGKVE+W   +K                LN  +  +  RFARDKHLLP I  S+L++ E+VL  YS+  T +G +++ T      ++ A  + CP
Sbjct:    1 MNSSADTFYQAPD----RFQWPHECTPEKASDSLEDEVCVGPTTKSVCDDIGGIRKIFASLAQTCKSITVPKKCVQTVDSERTEELLRLEREENAQVFNKTATETQPIVQTANDKVTEILNRILVQVDIASDIYIAYSIVALIIGMPLIIYKREKGSRILGATFGMTKLTFIIVVVVFLSMYESFFLIMKETDFVRIFRNFRNDPCYVDGDFSRRRVNLIIHTCNNVTQLATNSTYTLQDMDGVYFTTRRFALCKDATREPSAHPRQGDMDSLRHSYRDGDKKFPGSCNATYLDSETSTAPEDPGFSKLQALLGSGVVAQLFLKFIVTSWLVHIMAYCEPMIMHNGKVEIWDTNRKPTEEKGGEEKDAQEMPLNEREAASATRFARDKHLLPAIFMSILMVGEVVLIAYSMVVTHSGRSDMLTTAGNTGMSTA--FTCP 433          
BLAST of Gchil6529.t1 vs. uniprot
Match: A0A7S3LRQ6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRQ6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.280e-10
Identity = 71/273 (26.01%), Postives = 128/273 (46.89%), Query Frame = 0
Query:  333 PIVSTA---ESKINEVITRLMTQIDLAADCFIVYSIVAVMVGIPLIISKREKTSRVMSATLGLTKMTFVMVFVILLSLYDSFFLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMCNNISYIEQQSDYVLQKMDTVYYDTR--LFGHC----KDDNRELAIHPKLEAMDEIRKLYRGGNISNPGVCNATELDERTSVAPDNERSSKWKALLGSGVVAQLALKIIFTSWIIHLLAFMEPMVLHNGKVELWGMKQKTMLNAEDETAIRRF 596
            P VS A   ESK   ++ RLM QI+LA+D +I+YS+ A+ V  P I+ +    +R+      +++  F+++FV+ L  Y          +  + F N   D CY++  F       + + C  +  +   S++ L  +D   ++    L+  C    +D+  EL    K E   E ++      + N  + +   L +  +VAP    ++ +  LL  GV+AQL  K I  ++   +   ++P+ +HNGKVE  G +      +E E  +R +
Sbjct:  307 PEVSEALFEESK--SLLERLMWQINLASDLYIIYSVFALFVISPFIVYQSSFKTRLKRQYFSISQGLFILLFVLFLWTYPYIQATINLENLLKYFHNINVDTCYIDGKFLRGVKNTVQEACFKLEQLN--SNFTLASLDLQDFNASIDLYDQCNSAYQDEFPELYDKTK-EKASEAQETVLLAELCNQNIIS--NLVDANTVAPGVTETNVFGILLKLGVLAQLFAKFILVAFAKSVYQIVDPLAVHNGKVETIGKETPVPPASEVERFLRTY 572          
The following BLAST results are available for this feature:
BLAST of Gchil6529.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5J9_9FLOR0.000e+069.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPE7_CHOCR1.640e-12546.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3LRQ6_9STRA4.280e-1026.01Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 312..332
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 397..415
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..354
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 416..536
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 537..563
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..396
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 625..657
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 564..601
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 355..376
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 602..624
NoneNo IPR availableTMHMMTMhelixcoord: 390..412
NoneNo IPR availableTMHMMTMhelixcoord: 602..624
NoneNo IPR availableTMHMMTMhelixcoord: 355..377
NoneNo IPR availableTMHMMTMhelixcoord: 542..564

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:399763..401736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6529.t1Gchil6529.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 399763..401736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6529.t1 ID=Gchil6529.t1|Name=Gchil6529.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=658bp
MGTNPQTTPSFVSRFRSWRRGSFNNNVLPLPDFIPYPDRAQAISTPCSPT
SPIRNNSNEVSTQPVSKKKNSIFQNNRAQLSLPSRRCGKGLDGKDEDVHK
VEEVSKVRDLEAQLPNRSHRFKYNPEGLGQRLLVSARLKSKLETSKIIRI
PFSKSYKYTLIFALLFTGAFLTPQMLPKWIGFEWASPEDLCQSPESKIVE
IQQQLINFTSLRESKQFLKQQEYTLNCMNRSAADFYHGENGSLPRFLWPH
ECDSEKARISLNETTCVEQKTNVCKRVNFFARIFASISGDCVQKVGPELC
VESTNVERSESLYELEKERNALSQNLTEIDTEPIVSTAESKINEVITRLM
TQIDLAADCFIVYSIVAVMVGIPLIISKREKTSRVMSATLGLTKMTFVMV
FVILLSLYDSFFLIFQDTDFPRLFQNFLNDPCYVNPTFSSKRVGMIVDMC
NNISYIEQQSDYVLQKMDTVYYDTRLFGHCKDDNRELAIHPKLEAMDEIR
KLYRGGNISNPGVCNATELDERTSVAPDNERSSKWKALLGSGVVAQLALK
IIFTSWIIHLLAFMEPMVLHNGKVELWGMKQKTMLNAEDETAIRRFARDK
HLLPLIVFSVLLLAELVLFGYSIYTTINGANELPTQNSTLPLTPAPEWRC
PSSLGGM*
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