Gchil6507.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6507.t1
Unique NameGchil6507.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length477
Homology
BLAST of Gchil6507.t1 vs. uniprot
Match: A0A2V3IQ72_9FLOR (Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ72_9FLOR)

HSP 1 Score: 476 bits (1224), Expect = 4.690e-162
Identity = 274/484 (56.61%), Postives = 322/484 (66.53%), Query Frame = 0
Query:    1 MSSSDAPVVGISPENEQPIVKKLGNEADVVIKNPTDGPGTLPFSLSLPMISTVAELKKELNSRYPGSPPIRAQRLIYAGKLLRDGQKFCEFLSPLQQPGTPHTIHLVVSSPQQARQSSQNAPSPNPVSSPASTSADGGAAGPQAPRLPQFAYNGHFLGGQ---VPLPLQEALYAQHLQIVESLLARTFQNGTGAQSDPRMLAQMHAADIAAAAAATNTPEGG----AQPYAMPPPLAPGNGVFPGMMPMHPDVNVQNMPHMNMAAAQHTQAHQRPLPQNQQQNGQPHH-HQPQQPRAFNGFQLDVQIGRHGVPNRIRNALNAQNQPHVRQFVFQIEINWALMAKLIFLVYLLGYEGNSSRLFSLIIVAVGIYLWQTGHLGWLRRIVYTALPSPGRLIENLFPPRTQQPDTQQEDASQQSPPARQNPYGYPALIFSFVYSXXXGFVCSLLPAWNPQPLPRIEQIVQNPERPQEEPNMGANHDHVD 476
            MSSS+ P    S  + Q   +K  +EAD+VIKNPTDGPGTLPF LSLP+ +TV  LK EL ++YPGSP +  QRLIYAGKLL D QK  EFLSP QQ GTPHTIHLV+S+PQ  +  SQ + + N  SSP        +   Q PRLP FAYNG   GGQ   +PL LQE  YA+HLQ+VESLLA+T QN  G   DPR+LAQM  A             G     AQPYA  PPL                   Q++P +NMA  +  Q + +  P  Q  +  P    Q  QPR FNGFQLDVQIGR G+ N  RN +N  NQPHVRQFVFQ+EINWAL+AKL FLVYLLG+EGNS R++SLI+ A+ IYLWQTGHLGWLRR V  ALP+P  LIE+LFP   QQP ++ EDA+  +P AR NPYGYPA++ SF+YS XXGFVCSLLPAWNPQPLPRIEQIVQNPE   EE    ANH+HV+
Sbjct:    1 MSSSEQPEPQESVTSGQSTSQKAKSEADLVIKNPTDGPGTLPFVLSLPVSTTVERLKNELCTKYPGSPSVETQRLIYAGKLLSDSQKLREFLSPHQQNGTPHTIHLVISAPQPPQSFSQASTTQN--SSPTVNDNADSSPDAQPPRLPPFAYNGQLFGGQAPRIPLHLQEVEYAEHLQLVESLLAQTLQNAAGTPPDPRLLAQMQQAADMXXXXXXXXXXGSQNVRAQPYATAPPLXXXXXXXXXXXXXXXXXXXQHVPPVNMADPRTLQQNMQQPPTQQGNDANPQRARQAGQPRRFNGFQLDVQIGRAGLQNGARNGVNVPNQPHVRQFVFQLEINWALIAKLFFLVYLLGHEGNSRRMYSLIVAAIAIYLWQTGHLGWLRRFVNMALPNPRHLIEHLFP---QQPSSENEDAAGNTP-ARSNPYGYPAIMLSFIYSFXXGFVCSLLPAWNPQPLPRIEQIVQNPEHRHEEAARNANHEHVE 478          
BLAST of Gchil6507.t1 vs. uniprot
Match: R7QAY9_CHOCR (Ubiquitin-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAY9_CHOCR)

HSP 1 Score: 182 bits (463), Expect = 4.930e-48
Identity = 177/545 (32.48%), Postives = 240/545 (44.04%), Query Frame = 0
Query:    2 SSSDAPVVGISPENEQPIVKKLGNEADVVIKNPTDGPGTLPFSLSLPMISTVAELKKELNSRYPGSPPIRAQRLIYAGKLLRDGQKFCEFLSPLQQPGTPHTIHLVVSSPQQARQSSQNAPSPNPVSSPASTSA-----------------------------------------DGGAAG------------PQAPRLPQFAY------------------NGHFLGGQVPLP---LQEALYAQHLQIVESLLARTFQNGTGAQSDPRMLAQMHAADIAAAAAATNTPEGGAQPYAMPPPLAPGNGVFPGMMPMHPDVN--VQNMPHMNMAAAQHTQAHQRPLPQNQQQNGQPHHHQPQQPRAFNGFQLDV----QIGRHGVPNRIRNALNAQNQPHVRQFVFQIEINWALMAKLIFLVYLLGYEGNSSRLFSLIIVAVGIYLWQTGHLGWLRRIVYTALPSPGRLIENLFPPRTQQPDTQQEDASQQSP-PARQNP-----YGYPALIFSFVYSXXXGFVCSLLPAWNPQPLPRIEQIVQNPE 460
            S S+ PV   SPE  +     + N   +++KNPTD PG++PF+L + + +TV  LK+ L S YPGSP + +QRLIYAGKLL+D       L+   +P   H IHLVVSS  +A  ++  A S +  S+ A +SA                                           G  G            P  P +    Y                    H    Q PLP   + +A YA HLQ +E ++      G G      + AQ   A  AAAAAA      GA                   +    D+N  ++N    N A A          PQN+          PQ P A  GFQ  +    + G H   N   N     +   VR++VF  E+NW L+ KLIF+VYLLG EG   R++ L+ +A+ IYLWQT  LG+L RI   ALP+P +L E  FP R Q P+ +   ASQ    P  Q+P     +G  A++  F+YS   GFV SLLPAW P  LPR+E+++   E
Sbjct:    3 SPSNPPVDASSPEGTESAESPMFN---ILVKNPTDRPGSMPFTLDVNVKATVRNLKELLTSSYPGSPSVTSQRLIYAGKLLKDSHSLETILTSTDRPAQ-HIIHLVVSSRHRAAAATSRA-STSRTSTLAGSSAVPYQSXXXXXXXXXXXXXXXXTAPPQNYNNMFHPYVAFQQYPPGVEGQRYPYPPVPGVPPPDPSMYPLPYPPPQXXXXXXXSDVPGNVQAHRNAPQGPLPFAPMDQASYAAHLQAMERII------GDG------LAAQYTGAQEAAAAAAARGVREGADARVXXXXXXXXXXXAQAHIQAWTDLNAGLRN----NAAPAP---------PQNR----------PQGPDAGLGFQFGIGNGAEEGMHQNLNPQENHGIEHDGARVRRYVFHFEVNWTLILKLIFVVYLLGQEGTPRRVYILLSLALVIYLWQTNRLGFLGRIAGIALPNPVQLFEAFFP-RVQGPNEEGTQASQSDQDPNAQSPRGSSRFGRGAVVLCFIYSFFYGFVGSLLPAWRPPALPRVEELLHPAE 506          
BLAST of Gchil6507.t1 vs. uniprot
Match: A0A5J4YI10_PORPP (Ubiquitin-like domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI10_PORPP)

HSP 1 Score: 89.0 bits (219), Expect = 3.350e-15
Identity = 65/183 (35.52%), Postives = 90/183 (49.18%), Query Frame = 0
Query:  313 NAQNQPHVRQFVFQIEINWALMAKLIFLVYLLGYEGNSSRLFSLIIVAVGIYLWQTGHLGWLRRIVYTALPSPGRLI------------------ENLFPPRTQQPDTQQEDASQQSPPA--RQNPYGYPALIF-SFVYSXXXGFVCSLLPAWNPQPLPRIEQIVQNPERPQ---EEPNMGAN 471
            +A+ Q H R  V + EINWAL+ KL F+V+L+G EG   ++F +  VAV IY+WQ G L  L+R V    P+P RL                   E  FP   ++       A Q +P A  +  P   P+L F SF Y    G +CSL+P+W P   PR  + ++ P  P    E+ N  AN
Sbjct:  365 HARVQMHQRPMVLRFEINWALILKLAFVVFLIGQEGPPWKIFLMSFVAVMIYMWQIGRLAPLQRFVEQNFPNPARLFPVLPDGDLPQENQGQHGHEQQFPANAREDRGDALRAGQATPSAGSQVGPPNRPSLYFLSFFY----GLICSLVPSWRP---PRAAEALRPPAHPAPAGEDVNANAN 540          
BLAST of Gchil6507.t1 vs. uniprot
Match: A0A1X6PKS0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKS0_PORUM)

HSP 1 Score: 64.3 bits (155), Expect = 2.930e-7
Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 0
Query:  323 FVFQIEINWALMAKLIFLVYLLGYEGNSSRLFSLIIVAVGIYLWQTGHLGWLRRIVYTALPSPGRLIENLFPPRTQQPD--TQQEDASQQSPPARQNPYGYPALIFSFVYSXXXGFVCSLLPAWN 445
            F  ++ ++WAL+ KL F+V+LLG + +  RL++L+   V +YL  +G L  L      A PSPGRL   + P     PD  T  E A   +   R    G   ++    Y+   G VCSL+PAW 
Sbjct:  508 FALRLHVDWALVLKLGFVVFLLGQDASHRRLYALVAGGVALYLGLSGRLAGLLAWAARAAPSPGRLAAAIAPGGWV-PDAGTGGEGAPGAATAGRP---GTARMLGVCAYALVYGLVCSLVPAWR 628          
The following BLAST results are available for this feature:
BLAST of Gchil6507.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IQ72_9FLOR4.690e-16256.61Homocysteine-responsive endoplasmic reticulum-resi... [more]
R7QAY9_CHOCR4.930e-4832.48Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A5J4YI10_PORPP3.350e-1535.52Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A1X6PKS0_PORUM2.930e-735.20Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 24..116
e-value: 3.4E-15
score: 57.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 347..352
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 445..476
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 374..418
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 419..444
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 329..346
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..328
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 353..373
NoneNo IPR availableTMHMMTMhelixcoord: 353..375
NoneNo IPR availableTMHMMTMhelixcoord: 324..346
NoneNo IPR availableTMHMMTMhelixcoord: 419..441
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 43..88
e-value: 5.3E-6
score: 26.1
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 27..91
score: 11.899466
IPR039751Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 /2PANTHERPTHR12943HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UNIQUITIN-LIKE DOMAIN HERPUD PROTEIN FAMILY MEMBERcoord: 20..448
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 29..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004390_piloncontigtig00004390_pilon:263030..264460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6507.t1Gchil6507.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004390_pilon 263030..264460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6507.t1 ID=Gchil6507.t1|Name=Gchil6507.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=477bp
MSSSDAPVVGISPENEQPIVKKLGNEADVVIKNPTDGPGTLPFSLSLPMI
STVAELKKELNSRYPGSPPIRAQRLIYAGKLLRDGQKFCEFLSPLQQPGT
PHTIHLVVSSPQQARQSSQNAPSPNPVSSPASTSADGGAAGPQAPRLPQF
AYNGHFLGGQVPLPLQEALYAQHLQIVESLLARTFQNGTGAQSDPRMLAQ
MHAADIAAAAAATNTPEGGAQPYAMPPPLAPGNGVFPGMMPMHPDVNVQN
MPHMNMAAAQHTQAHQRPLPQNQQQNGQPHHHQPQQPRAFNGFQLDVQIG
RHGVPNRIRNALNAQNQPHVRQFVFQIEINWALMAKLIFLVYLLGYEGNS
SRLFSLIIVAVGIYLWQTGHLGWLRRIVYTALPSPGRLIENLFPPRTQQP
DTQQEDASQQSPPARQNPYGYPALIFSFVYSFLYGFVCSLLPAWNPQPLP
RIEQIVQNPERPQEEPNMGANHDHVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR039751HERPUD1/2
IPR029071Ubiquitin-like_domsf