Gchil647.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil647.t1
Unique NameGchil647.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length308
Homology
BLAST of Gchil647.t1 vs. uniprot
Match: A0A2V3IDF8_9FLOR (DNA-directed RNA polymerases II, IV and V subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDF8_9FLOR)

HSP 1 Score: 517 bits (1331), Expect = 1.280e-183
Identity = 253/313 (80.83%), Postives = 278/313 (88.82%), Query Frame = 0
Query:    1 MPFGRQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGDEA------DSGNGILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKLSNNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNSNPERFDFTAETTGSMTPSSALLMALDLLKKRVDNVMAHI 307
            MPFGR P L+IK+SSR YM FSL GTDVSMANAIRRTMI+EVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENV+RFDYGFDCE+CEDYCA CSVSF +QVH  G  +VRNVTS+D+ C+N ETE+WCH+VKP+HDSGD+A      D GNGILIARLSSSQRLDI CIARKGI KDHAKWSPMCTVSYRIVPPAVELVL++LN+LLE  AKEDLA YSQGLLK++N  L YEEPFLKGRIGITPDTTRR G+L T AGGKPS++V++N  PERFDFTAETTGSMTP  ALLMALD+LKKRVDNVMAHI
Sbjct:    1 MPFGRNPGLDIKESSRCYMNFSLNGTDVSMANAIRRTMIAEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVDRFDYGFDCEKCEDYCAYCSVSFQIQVHATGDTAVRNVTSKDIVCTNLETEEWCHDVKPVHDSGDDAETGADSDGGNGILIARLSSSQRLDIRCIARKGIAKDHAKWSPMCTVSYRIVPPAVELVLEKLNSLLEQDAKEDLAVYSQGLLKVTNGFLQYEEPFLKGRIGITPDTTRRAGQLATQAGGKPSDIVRYNPEPERFDFTAETTGSMTPRFALLMALDILKKRVDNVMAHI 313          
BLAST of Gchil647.t1 vs. uniprot
Match: A0A1X6PC39_PORUM (RPOLD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC39_PORUM)

HSP 1 Score: 279 bits (714), Expect = 1.740e-89
Identity = 162/330 (49.09%), Postives = 201/330 (60.91%), Query Frame = 0
Query:    1 MPFGR-QPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETE-DWCHEVKPIHDSGD--------------------EADSGNGILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKL-SNNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNSNPERFDFTAETTGSMTPSSALLMALDLLKKRVDNVMAHI 307
            MP  R Q  L+     R  M F L  TDVSMANA+RRTMI+EVPTMA+DLVT+ ENT+ LHDEYIAHR+GLIPL S   + + Y  DC  C+D+C  CSVS+ L V    TD    VTSRDL  +    +      V P+HDSGD                       +  GILI +L+  QRL    IA+KGIGK+HAKWSP+CTV++R  PPAV  VL RLN LL+A AK DL   S G++ L +   L Y+ PFL GR  IT D  RR GEL  AAGG  SE+V+F   PERF+F  ETTG + P+  L  A+ +L+++V NV AH+
Sbjct:    1 MPNARDQVQLDSVTLGRNDMRFILRNTDVSMANALRRTMIAEVPTMAVDLVTIHENTTVLHDEYIAHRIGLIPLSSSAADGYVYSRDCVACDDFCGVCSVSYTLSV-TNATDDDVPVTSRDLVPAEVSPDAPQGDPVVPVHDSGDVLRDAAPSPSSPTGTVPASVSDAAAKGILIVKLARGQRLSFSAIAKKGIGKEHAKWSPVCTVAFRAEPPAVRFVLPRLNELLDAAAKADLLSLSLGVVALDAAGDLEYDGPFLAGRSAITADAVRRAGELAAAAGGAESEIVEFCEFPERFEFDIETTGVLPPTEVLTRAITVLREKVQNVSAHL 329          
BLAST of Gchil647.t1 vs. uniprot
Match: A0A7S1ERC4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERC4_9RHOD)

HSP 1 Score: 253 bits (645), Expect = 2.200e-79
Identity = 142/305 (46.56%), Postives = 195/305 (63.93%), Query Frame = 0
Query:    1 MPFGRQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGDEADSGNGILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKLS--NNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNSNP---ERFDFTAETTGSMTPSSALLMALDLLKKRV 300
            MP  R   LE++  +   + FSL  +D S+ANA+RR MI+EVPT+AI+LV+V  N+S LHDE+I HRLGLIPL S  V+ F+Y ++C+ C++ CA C V F + +H    DS  +VT+  L   +K   + C  V PIH  G+E   G+GI+IA+L   Q+L +H IARKGIGK+HAKWSP+ T +YR     V L LDRLNA+L+  AK +L K+S G L +   ++ L YEE F+ GR  I+ D  RR GEL+  AG   SEV+  ++N     RFDF  E+TG+ TP   L  AL +L +R+
Sbjct:    1 MPNARFSALEVESVTSDEIRFSLNKSDASVANALRRVMIAEVPTLAIELVSVSFNSSPLHDEFIVHRLGLIPLNSNRVDAFNYAYECD-CDELCAKCCVEFSIDIH--SVDSDMSVTTHHLVNESKYLSEDCASVVPIH--GEELGDGSGIIIAKLKQGQKLKLHAIARKGIGKEHAKWSPVATATYRS-EAGVNLKLDRLNAVLDFNAKSELVKWSDGALTMDRRSDKLEYEEAFVLGRTSISADLVRRCGELLLDAGSHISEVLVVSANDGSGARFDFVVESTGARTPQDILRAALLILLERI 299          
BLAST of Gchil647.t1 vs. uniprot
Match: A0A7S2ZVX0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZVX0_9RHOD)

HSP 1 Score: 229 bits (584), Expect = 6.350e-70
Identity = 127/324 (39.20%), Postives = 192/324 (59.26%), Query Frame = 0
Query:    1 MPFGRQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGD-----------EADSGN----GILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKLS--NNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNSNPERFDFTAETTGSMTPSSALLMALDLLKKRVDNVMAHI 307
            MP  R P+++++  +   M F+L   + S+ANA+RR MI+EVPTMAIDLV ++ NTS L DE++AHRLGLIPL S  V++F+   DC+ C D+C  CS+ +VL V     D + +V S+DL    ++    C  VKP+ +SG+           ++D G     GI+I +L   QR+   CIA+KG GK+HAKWS   TV +R   P+V   LD++N  L    K DL KYS+G+L  +   + L YEE F + R  I+ DT ++ G+L    G  P E++ +N NP  F+F  ETTG +T       A+++L  +++++  ++
Sbjct:    1 MPNARLPDIKLERVTSSEMDFTLLNAETSIANALRRVMIAEVPTMAIDLVNMEVNTSPLFDEFVAHRLGLIPLSSHEVDQFNNTRDCDRCTDHCPYCSIEYVLDVSCDNEDFL-DVMSKDLINVYEKERPECASVKPVDNSGESEAHARMNQASKSDGGQRPPEGIVITKLRRGQRIKCTCIAKKGTGKEHAKWSAASTVRFR-TDPSVRFRLDKINDTLTKDEKIDLEKYSEGMLMYNPTTDALEYEECFQERRFAISTDTIKKAGDLAGLHGVHPHEIMVYNDNPTVFNFKCETTGVLTAKELFFKAIEVLMNKLNSIQGYL 322          
BLAST of Gchil647.t1 vs. uniprot
Match: A0A5J4YZ21_PORPP (DNA-directed RNA polymerases II, IV and V subunit 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ21_PORPP)

HSP 1 Score: 231 bits (588), Expect = 1.280e-69
Identity = 133/314 (42.36%), Postives = 193/314 (61.46%), Query Frame = 0
Query:    1 MPFGRQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDL--TCSNKETEDWCHEVKPIHDS--GDEAD-----SGNGILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKLS--NNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNSNPERFDFTAETTGSMTPSSALLMALDLLKKRVDNV 303
            MP  R P LE+ + +   + F L+ TD S+ANA+RR MI+EVPT+AIDLV +  N+S LHDE+IAHRLG+IPL S+     +Y  DCE CED+C  C+V F  Q+ V G      VTS+ L     + +T      V+P+H S   +  D     S +GI+IA+L + QR+ +  IARKGIGK+HAKWSP+ TVSY+   P V L LD LN  LE   +++L K+S G LK     N L Y++ F  GR  ++ D  R+ GE++   G  PSEV+  N++P RF+F  E+TG+++    ++ A+ +L+ ++  +
Sbjct:   88 MPNARFPTLELSECTDESLKFVLSRTDASVANALRRVMIAEVPTIAIDLVNISFNSSPLHDEFIAHRLGMIPLVSDKAADMNYTRDCE-CEDFCDLCAVVF--QMDVEGQVEGTTVTSQHLQNVWFDPDTYPRASTVEPVHWSCGAEHPDPALDASASGIIIAKLKAGQRIKLEAIARKGIGKEHAKWSPVATVSYKS-EPVVSLRLDELNNRLEVAQRQELLKWSDGALKWDARTNKLEYDDAFKYGRTALSNDFVRKCGEMLVQVGSHPSEVILLNNDPSRFEFFVESTGAISAPVVVVNAISVLRNKLQEL 397          
BLAST of Gchil647.t1 vs. uniprot
Match: A0A7S1TMT8_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMT8_9RHOD)

HSP 1 Score: 220 bits (560), Expect = 1.800e-66
Identity = 131/312 (41.99%), Postives = 187/312 (59.94%), Query Frame = 0
Query:    5 RQPNLEIKDSSRF--YMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGD-----EADSGN--GILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKL--SNNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNS--NPERFDFTAETTGSMTPSSALLMALDLLKKRVDNV 303
            R P+L++ + S     + F+LT TD S+ANA+RR MI+EVPT+AIDLV++  N+SALHDE++AHRLG+IPL+SE      Y  DC+ C+++C  C+  + L V     ++   VTSR L     E+     E+ P+HD+         D G    ILIA+L   QRLD+ CIARKG+GK+HAKW P+ T S+R  P AV L LDRLN LL+  AK ++A +S G L L    ++L ++  F+ GR  I+ D  RRVGEL+       SEVV+  +      FDF  E+TG ++    L  A+ +L  ++  +
Sbjct:    6 RFPSLQVAELSADGRELRFALTRTDASVANALRRVMIAEVPTIAIDLVSISVNSSALHDEFLAHRLGMIPLFSERAVSMRYARDCD-CDEFCPQCAAMYRLAVSCSAAETELAVTSRHLEPVWPESA----EILPVHDASTAPTRLSVDGGERAAILIAKLRPGQRLDMTCIARKGLGKEHAKWIPVATASFRGAP-AVSLKLDRLNVLLDRAAKAEVAAWSDGALMLRRERDVLEFDPAFVAGRTSISADLVRRVGELLLDVNAHVSEVVEVGAADGGSSFDFVVESTGVLSAPDILRAAIRVLMDKLQGI 311          
BLAST of Gchil647.t1 vs. uniprot
Match: A0A7S3EGI7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EGI7_9RHOD)

HSP 1 Score: 214 bits (545), Expect = 4.920e-64
Identity = 121/297 (40.74%), Postives = 176/297 (59.26%), Query Frame = 0
Query:    1 MPFGRQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGD-----------EADSGN----GILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKLS--NNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNSNPERFDFTAETT 280
            MP  R P+++++  +   M F+L   + S+ANA+RR MI+EVPTMAIDLV ++ NTS L DE++AHRLGLIPL S  V++F+   DC+ C D+C  CS+ +VL V     D + +V S+DL    ++    C  VKP+ +SG+           ++D G     GI+I +L   QR+   CIA+KG GK+HAKWS   TV +R   P+V   LD++N  L    K DL KYS+G+L  +   + L YEE F + R  I+ DT ++ G+L    G  P E++ +N NP  F+F  E +
Sbjct:    1 MPNARLPDIKLERVTSSEMDFTLLNAETSIANALRRVMIAEVPTMAIDLVNMEVNTSPLFDEFVAHRLGLIPLSSHEVDQFNNTRDCDRCTDHCPYCSIEYVLDVSCDNEDFL-DVMSKDLINVYEKERPECASVKPVDNSGESEAHARMNQASKSDGGQRPPEGIVITKLRRGQRIKCTCIAKKGTGKEHAKWSAASTVRFR-TDPSVRFRLDKINDTLTKDEKIDLEKYSEGMLMYNPTTDALEYEECFQERRFAISTDTIKKAGDLAGLHGVHPHEIMVYNDNPTVFNFKCEVS 295          
BLAST of Gchil647.t1 vs. uniprot
Match: M2XXQ9_GALSU (DNA-directed RNA polymerase II subunit C n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXQ9_GALSU)

HSP 1 Score: 211 bits (536), Expect = 8.610e-64
Identity = 114/257 (44.36%), Postives = 161/257 (62.65%), Query Frame = 0
Query:    1 MPFGRQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGD------EADSGNGILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKLS--NNILHYEEPFLKGRIGITPDTTRRV 249
            MPF + P + I   +   M F +T TD S+ANAIRR  I++VPTMAIDL+ ++ NTS+LHDE +AHRLGLIPL S  V+ F+Y  DC  C D+C +CSV+F L V    T+    VTS+DL   +         V+P+H SG+      E +  NGI++A+L+  QR+ +  IA+KG+GK+HAKWSP+CT+SY+   P+V+  L++LN LL  +AK  L K S   L +   +N L YE  F  GRI +  D  +++
Sbjct:    1 MPFAKTPTIHINRQTFNEMDFIITDTDTSVANAIRRVAIAQVPTMAIDLIHMQVNTSSLHDELLAHRLGLIPLTSHRVDEFEYTRDCPYCSDHCLHCSVTFELDVQC--TEEAMTVTSQDLVNKSAHESQLAASVQPVHFSGEYNPTLSEENGLNGIVLAKLAKGQRIQLTAIAKKGVGKEHAKWSPVCTISYQ-TDPSVQFNLNKLNTLLSEEAKRALVKSSDECLAIDPKSNQLIYETAFTLGRISLPLDCVKKM 254          
BLAST of Gchil647.t1 vs. uniprot
Match: J7GAM7_9CRYP (DNA-directed RNA polymerase II n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7GAM7_9CRYP)

HSP 1 Score: 193 bits (491), Expect = 1.980e-56
Identity = 118/303 (38.94%), Postives = 178/303 (58.75%), Query Frame = 0
Query:    9 LEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGDEADSGN--GILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDRLNALLEAKAKEDLAKYSQGLLKL--SNNILHYEEPFLKGRIGITPDTTRRVGELITAAGGKPSEVVKFNSNPERFDFTAETTGSMTPSSALLMALDLLKKRVDNVMAHI 307
            L I   S F    SL   D+S+ N++RR MI+E+PTMAIDL+ V+ N+S  HDE++AHRLGLIPL+SE+ N+F Y  +CE CE +C+ CSV+F L V     D  R+V S DL   N +   +   V PIHDSG  AD      ILI++LS  QRL +  +A+KGIG +HAKWSP+  +  +     + + ++ LN + E K K +L K    +LK   SN  L Y E   K +  ++  T++++ + +      P +V+K N +   F+   E+TG++ P      A+D+LKK+++ +  H+
Sbjct:    6 LTIDSISNFETKISLKEIDISLINSLRRVMINEIPTMAIDLIFVEINSSIFHDEFLAHRLGLIPLFSESANQFRYTRECE-CEKFCSKCSVAFSLDVIAK--DKYRDVFSTDLIVLNPKESFFAKHVSPIHDSG-TADFPRLEPILISKLSQGQRLKLIGVAKKGIGLEHAKWSPISIIRLKR-QNTIYININDLNFMTETKIKHELVKNFPEILKQNDSNQNLVYHE---KKKFSLSVLTSQKLIDFLIKKKIDPKKVIKINPDKINFEIYIESTGALKPDFIFQNAIDILKKKINIIGIHV 300          
BLAST of Gchil647.t1 vs. uniprot
Match: A0A1R2BMG1_9CILI (RPOLD domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BMG1_9CILI)

HSP 1 Score: 187 bits (474), Expect = 6.160e-54
Identity = 113/306 (36.93%), Postives = 180/306 (58.82%), Query Frame = 0
Query:    5 RQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLVTVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVSFVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGDEADSGNGILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLD--RLNALLEAKAKEDLAKYSQG-LLKLSNNILHYEEPFLKGRIGITPDTTRRVGELITAAG----GKPSEVVKFNSNPERFDFTAETTGSMTPSSALLMALDLLKKRVDNV 303
            R P +EI+  S+  M F+L+G D S+AN++RRTMI+EVPTMAIDLV ++ NTS+LHDE+IAHRLGLIPL SEN++ +++  +C+ C  +C  C+V F L+V       V +VTS DL    +      +EV+P       AD    IL+ +L  +Q +DI C ARKGIGK+HAKWSP+ T S++  P   E++L+  ++  L++ K K+D        +  L+ + +   +P    +     +  R+   +IT +          +V+ N   ++F F  E++G++ P S L+ A  LL  +++++
Sbjct:    8 RTPGIEIQKLSKEKMKFTLSGVDSSIANSLRRTMIAEVPTMAIDLVQIQINTSSLHDEFIAHRLGLIPLVSENIDEYEFPRNCK-CSGHCQCCAVQFRLKVK-NSEGGVLDVTSMDL----RRVSQSANEVRP-------ADIDGPILLLKLKKNQEIDITCNARKGIGKEHAKWSPVATCSFKYTP---EIILNTPKIETLMDLKDKQDFVNSCPAKVFNLNEDNIEIVKP---NKCMFCDECVRKGESMITKSSIAILNSLENIVRINQIKDKFVFKVESSGALKPESILMKAFTLLCTKLEDI 294          
The following BLAST results are available for this feature:
BLAST of Gchil647.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDF8_9FLOR1.280e-18380.83DNA-directed RNA polymerases II, IV and V subunit ... [more]
A0A1X6PC39_PORUM1.740e-8949.09RPOLD domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7S1ERC4_9RHOD2.200e-7946.56Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S2ZVX0_9RHOD6.350e-7039.20Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YZ21_PORPP1.280e-6942.36DNA-directed RNA polymerases II, IV and V subunit ... [more]
A0A7S1TMT8_9RHOD1.800e-6641.99Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S3EGI7_9RHOD4.920e-6440.74Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XXQ9_GALSU8.610e-6444.36DNA-directed RNA polymerase II subunit C n=1 Tax=G... [more]
J7GAM7_9CRYP1.980e-5638.94DNA-directed RNA polymerase II n=1 Tax=Chroomonas ... [more]
A0A1R2BMG1_9CILI6.160e-5436.93RPOLD domain-containing protein n=1 Tax=Stentor co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeSMARTSM00662rpoldneu2coord: 18..306
e-value: 3.7E-56
score: 202.5
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typePFAMPF01193RNA_pol_Lcoord: 21..298
e-value: 1.5E-17
score: 63.6
IPR036643DNA-directed RNA polymerase, insert domain superfamilyGENE3D2.170.120.12coord: 44..177
e-value: 2.6E-66
score: 225.8
IPR036643DNA-directed RNA polymerase, insert domain superfamilySUPERFAMILY56553Insert subdomain of RNA polymerase alpha subunitcoord: 43..181
IPR011262DNA-directed RNA polymerase, insert domainPFAMPF01000RNA_pol_A_baccoord: 50..180
e-value: 2.4E-27
score: 95.5
IPR036603RNA polymerase, RBP11-like subunitGENE3D3.30.1360.10coord: 16..302
e-value: 2.6E-66
score: 225.8
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 6..304
NoneNo IPR availablePANTHERPTHR11800DNA-DIRECTED RNA POLYMERASEcoord: 1..304
NoneNo IPR availablePANTHERPTHR11800:SF2DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3coord: 1..304
IPR001514DNA-directed RNA polymerase, 30-40kDa subunit, conserved sitePROSITEPS00446RNA_POL_D_30KDcoord: 32..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:737206..738129 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil647.t1Gchil647.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 737206..738129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil647.t1 ID=Gchil647.t1|Name=Gchil647.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=308bp
MPFGRQPNLEIKDSSRFYMGFSLTGTDVSMANAIRRTMISEVPTMAIDLV
TVKENTSALHDEYIAHRLGLIPLYSENVNRFDYGFDCEECEDYCANCSVS
FVLQVHVPGTDSVRNVTSRDLTCSNKETEDWCHEVKPIHDSGDEADSGNG
ILIARLSSSQRLDIHCIARKGIGKDHAKWSPMCTVSYRIVPPAVELVLDR
LNALLEAKAKEDLAKYSQGLLKLSNNILHYEEPFLKGRIGITPDTTRRVG
ELITAAGGKPSEVVKFNSNPERFDFTAETTGSMTPSSALLMALDLLKKRV
DNVMAHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR036643RNApol_insert_sf
IPR011262DNA-dir_RNA_pol_insert
IPR036603RBP11-like
IPR001514DNA-dir_RNA_pol_30-40kDasu_CS