Gchil6385.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6385.t1
Unique NameGchil6385.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length411
Homology
BLAST of Gchil6385.t1 vs. uniprot
Match: A0A2V3IU11_9FLOR (Desert hedgehog protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU11_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 1.850e-86
Identity = 168/382 (43.98%), Postives = 224/382 (58.64%), Query Frame = 0
Query:    5 ARALSIAAVRVQTKFLRLPSVSESCASSITHVRLALYRGINGADPNGTYDGLLWRNLRVDDKSCVSLYDALHSTFFEVRASPSPAAPVDAASPWFLVGFDNSPRRCEMYSTRLSESYYFTDDLPRFRGRLERDGLLLRGVAQNAKSGTIFMFTVPFSREGTLQGPSCVFVDERDAQGITSDVAADSDAXXXXXXXXXXXAAATPEALQDVDEDGAVCLAGDVLVQLDDGTLRRMDALQRGDRVRAPRGHDTVISLSHADATMRTKFIQLCVLVTGAETTLT---TLTLTPGHLLLARNGEAFAAREARAGSALRAVDGVRAVVNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVRALRL-RVDWG 382
            A A+S AA  ++T F+ LPS+ E CA SI H R+A Y+GIN  D +GTYD ++W +L+V+ K C S++D L STFF    +P+     D+   WFL+G DNSPRRCE YST L   Y+FT DL  FR R ER G LL GVA NAK G +FMF +PF  +  L+G  C +VDER A G+ S+V  DS              A++             C  G+V V++ DG LR M  L+ GD V        V++ SHAD   +  FI L V V  A +++    +L +T  H+L  ++G A +A EAR G+ALRAV G   VV   ++    GV++P+T +G L++RGG+VVSCYS L    VAHA+L PVRA     VDWG
Sbjct:   31 ATAISKAASEIETTFVVLPSLGE-CAQSIQHERIASYKGINSNDADGTYDAIVWSDLKVNGKRCASVHDDLQSTFFRPMQTPTQPG-TDSPLGWFLIGVDNSPRRCEAYSTNLQARYFFTRDLDTFRDRFERRGYLLPGVATNAKRGMVFMFVLPFGSQSFLEGAPCAYVDERHADGLISNV--DSGGGDDAGDAE----ASSXXXXXXXXXXEPACFGGEVQVEMADGGLRLMKHLRVGDFVAGVYSPQRVVAFSHADEAQQATFISLQVAVRRANSSVEKVLSLQVTRDHVLYDKSGRAMSAEEARVGTALRAVRGELVVVE-VRSERGVGVWAPVTTEGALIVRGGMVVSCYSRLFEVNVAHALLAPVRAFWTGAVDWG 403          
BLAST of Gchil6385.t1 vs. uniprot
Match: R7Q4F1_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4F1_CHOCR)

HSP 1 Score: 132 bits (331), Expect = 7.170e-31
Identity = 107/361 (29.64%), Postives = 163/361 (45.15%), Query Frame = 0
Query:   29 CASSITHVRLALYRGINGADPNGTYDGLLWRNLRVDDKSCVSLYDALHSTFFEVRASPSPAAPVDAASPWFLVGFDNSPRRCEMYSTRLSESYYFTDDLPRFRGRLERDGLL-----LRGVAQNAKSGTIFMFTVPFSREGTLQGPSCVFVDERDAQGITSDVAADSDAXXXXXXXXXXXAAATPEALQD-----VDEDGAVCLAGDVLVQLDDGTLRRMDALQRGDRVRAPRGHDT--VISLSHADATMRTKFIQLCVLVT--GAETTLTTLTLTPGHLLLARNGEAFAAREARAGSALRAVDGVRAVVNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVRAL 375
            C  ++ H  +  Y GI+ A+ +   DG+LW++L V+   C++      ST F+   S  P  P   A P+FLVG DN+ RRC  ++ +   +Y FT+D PRF+ R   + ++     L     N   G I+M +  FS       PS        +  + S +                  AATP +         ++DG+VC      V  D   + +M  L+ GDRV+      T  VIS SH D  + T    + V     G  +  T L+ +P HLL   +G        R G ++    G    +  T +   +G+YSP+T  G +V+ G +V +CY+  L   VAHA+L PVRAL
Sbjct:   51 CPETVRHTSIRTYTGIDPANASAALDGILWKDLVVNGVPCLNSPAQEASTCFKDSPSSPPDTPAAQAEPFFLVGQDNAARRCGPFAAKFPANYSFTNDFPRFKQRFIDESIIPSNSELPDEVANPIRGDIYMLSRQFS-------PS--------SSAVQSQIVC-------------TYLAATPTSTXXXXXSMTEDDGSVCFPAWATVLDDKNRIVQMKHLRLGDRVQVSASGQTSPVISFSHRDHEIWTTVSTIHVSGPPGGLGSNRTILSASPSHLLRLPDGSMHPIGALRQGDSVLLSGGHIGRIGRTSSKLAKGLYSPVTAHGDIVVNG-IVATCYTTSLRAEVAHALLVPVRAL 382          
BLAST of Gchil6385.t1 vs. uniprot
Match: A0A2V3J2J0_9FLOR (Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J0_9FLOR)

HSP 1 Score: 77.8 bits (190), Expect = 4.930e-12
Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = 0
Query:  220 VCLAGDVLVQLDDGTLRRMDALQRGDRVRAPRG-HDTVISLSHADATMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARNGEAFAAREARAGSALRAVDGVRAVVNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVRA 374
            VC      V+L+DG++RRMD LQ GDRV    G +  +   +H  A +R  F+   ++ T  + +LT   LT GH + A N  +  A   R G  ++  DG +++V +       G+Y+P T  G L++ G V V+ Y+  +H  +AH++LTP+RA
Sbjct:  213 VCFPAHAQVRLEDGSVRRMDQLQIGDRVHVGNGIYSPIFMFTHQHARIRYPFV---IIQTDKQHSLT---LTSGHFMYA-NDASVRASAVRVGDYVQLEDGSKSLVTAVSKHISNGLYNPQTLHGDLIVNG-VRVTTYTSAIHLTLAHSLLTPLRA 360          
BLAST of Gchil6385.t1 vs. uniprot
Match: A0A2V3IRZ6_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 64.3 bits (155), Expect = 1.530e-7
Identity = 47/157 (29.94%), Postives = 82/157 (52.23%), Query Frame = 0
Query:  220 VCLAGDVLVQLDDGTLRRMDALQRGDRVRAPRGHDT---VISLSHADATMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARNGEAFAAREARAGSALRAVDGVRAVVNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVR 373
            +C   +  V+++DG+ +RMD +Q GDRV+   G+D    V   +H  +   ++F++L  + +GA      ++ T GH +   NG   AAR A+ G  +   +G R+ V     V + G+Y+P T  G +++   V  S ++  +    A AML P+R
Sbjct:  271 ICFPAEATVEMEDGSTKRMDQVQIGDRVKV--GYDMFSEVFMFTHKVSKRVSQFVKLD-MASGAS-----ISATSGHYVYL-NGRLAAARTAKVGDVMELGNGARSTVEKVSMVRKSGLYNPQTLHGDIIVNE-VRASTFTTAIEAGTAQAMLAPLR 417          
BLAST of Gchil6385.t1 vs. uniprot
Match: U4U931_DENPD (Protein hedgehog n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4U931_DENPD)

HSP 1 Score: 63.5 bits (153), Expect = 1.610e-7
Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 0
Query:  221 CLAGDVLVQLDDGTLRRMDALQRGDRVRAPRGHDT---------VISLSHADATMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARNGEAFAAREARAGSALRAVDGVRAV----VNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVR 373
            C  GD  V    G  RR+  LQ G+R+ A   HD          VI     + T +  F+ +  L +G      TLT+TP HL++ ++G    A   +AG  L   D    +    + S   V+R GVY+PLT+ G +V+   VVVSCY+ + ++++AH    P+R
Sbjct:  104 CFTGDSTVLTSGGVRRRLSELQVGERILA---HDPSTKKLVFSEVILFLDYNPTEKRDFLSVN-LKSGR-----TLTVTPNHLVILKDGRTVYAGTLKAGDHLLVSDSQNNLSEDLIESVTAVFRIGVYAPLTKAGTVVVNE-VVVSCYATVDNQKLAHWAFAPLR 259          
BLAST of Gchil6385.t1 vs. uniprot
Match: N6TPP0_DENPD (Protein hedgehog (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TPP0_DENPD)

HSP 1 Score: 62.8 bits (151), Expect = 2.520e-7
Identity = 53/166 (31.93%), Postives = 82/166 (49.40%), Query Frame = 0
Query:  221 CLAGDVLVQLDDGTLRRMDALQRGDRVRAPRGHDT---------VISLSHADATMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARNGEAFAAREARAGSALRAVDGVRAV----VNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVR 373
            C  GD  V    G  RR+  LQ G+R+ A   HD+         VI     + T +  F+ +  L +G      TLT+TP HL++ ++G    A   +AG  L   D    +    + S   V+R GVY+PLT+ G +V+   VV SCY+ + ++++AH    P+R
Sbjct:   85 CFTGDSTVLTSGGVRRRLSQLQVGERILA---HDSSTKKLVFSEVILFLDYNPTEKRDFLSVN-LKSGR-----TLTVTPNHLVILKDGRTVYAGTLKAGDHLLVSDSQNNLSEDLIESVTAVFRIGVYAPLTKAGTVVVNE-VVASCYATVDNQKLAHWAFAPLR 240          
BLAST of Gchil6385.t1 vs. uniprot
Match: A0A833RV23_9HYME (Hedgehog protein n=1 Tax=Frieseomelitta varia TaxID=561572 RepID=A0A833RV23_9HYME)

HSP 1 Score: 61.6 bits (148), Expect = 1.020e-6
Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = 0
Query:  221 CLAGDVLVQLDDGTLRRMDALQRGDRVRAPRGH-----DTVISLSHADATMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARNGEAFAAREARAGSAL--RAVDGVRAV--------VNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVR 373
            C  G  LV+ +DG+ +R+D ++ G+R+ A   H       VI+      T R +F++L      A  +   LTLTP HL+   N     A   R G  +  R  DG   +        V  ++ V   G+Y+PLT +G  VL   VV SCY+ + ++++ H    P R
Sbjct:  190 CFPGRSLVRTEDGSTKRLDQVELGERIAAVDNHGDVVYSEVIAFLDRSVTERRQFVRL------ATESGRVLTLTPAHLVPVENRSTVFAGRVRPGDKILVRDPDGENELRHRLRWDKVVDSRLVLEEGIYAPLTSEGT-VLVDDVVASCYAIVDNQQLVHLAFLPYR 350          
BLAST of Gchil6385.t1 vs. uniprot
Match: A0A5J4YMS1_PORPP (Desert hedgehog protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMS1_PORPP)

HSP 1 Score: 59.7 bits (143), Expect = 4.350e-6
Identity = 50/161 (31.06%), Postives = 80/161 (49.69%), Query Frame = 0
Query:  217 DGAVCLAGDVLVQLDDGTLRRMDALQRGDRVRAPRGHDT---VISLSHADATMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARN-GEAFAAREARAGSALRAVDGVRAVVNSTKTVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAMLTPVR 373
            D +VC      V L++G  + M  L+ GDRVR     D    V    H +    + F++   L +G +     ++++P H + ++N G   A        AL+A DG    V +   V+ RGV+SP T QG L++  G +VS YS+ +   +AH +L P+R
Sbjct:  224 DDSVCFPASGAVTLENGESKNMALLELGDRVRVATNPDVFSDVFFFGHREPRAVSHFLRFS-LASGNQ-----VSVSPRHYIYSQNRGRTLAKHVLPGKDALQAADGQWDPVVARHAVFDRGVFSPHTLQGDLLV-DGYLVSSYSDSVSPGLAHILLAPLR 377          
BLAST of Gchil6385.t1 vs. uniprot
Match: A0A5J4Z344_PORPP (Transmembrane protease serine 9 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z344_PORPP)

HSP 1 Score: 59.7 bits (143), Expect = 5.420e-6
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = 0
Query:  221 CLAGDVLVQLDDGTLRRMDALQRGDRVR-APRGHDTVISLSHADA-TMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARNGEAFAAREARAGSALRAVDGVRAVVNSTK-TVWRRGVYSPLTRQGVLVLRGGVVVSCYSELLHERVAHAML 369
            C   + LV+++DG+ +RMDAL+ GD VR +      V+   H DA ++ + F+++       +    +LT+T GHL+ A NG+   A   + G  +    G  A V S +  V  +G+Y+P T  G +V+  GV  SCY+  +   + HA+L
Sbjct:  367 CFPANGLVEMEDGSFKRMDALKIGDMVRVSSEAFSPVVFWGHHDAESVHSDFVRI-------QLEHHSLTVTSGHLVYA-NGKLVVAGSVQPGDIMITGTGESASVLSVRRNVRAKGLYNPHTAHGDIVV-DGVSASCYTRWVAPGLGHALL 509          
The following BLAST results are available for this feature:
BLAST of Gchil6385.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IU11_9FLOR1.850e-8643.98Desert hedgehog protein B n=1 Tax=Gracilariopsis c... [more]
R7Q4F1_CHOCR7.170e-3129.64HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3J2J0_9FLOR4.930e-1234.62Temptin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
A0A2V3IRZ6_9FLOR1.530e-729.94Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
U4U931_DENPD1.610e-732.53Protein hedgehog n=1 Tax=Dendroctonus ponderosae T... [more]
N6TPP0_DENPD2.520e-731.93Protein hedgehog (Fragment) n=2 Tax=Dendroctonus p... [more]
A0A833RV23_9HYME1.020e-630.36Hedgehog protein n=1 Tax=Frieseomelitta varia TaxI... [more]
A0A5J4YMS1_PORPP4.350e-631.06Desert hedgehog protein A n=1 Tax=Porphyridium pur... [more]
A0A5J4Z344_PORPP5.420e-632.24Transmembrane protease serine 9 n=1 Tax=Porphyridi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 220..376
e-value: 1.4E-19
score: 70.4
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 221..357
e-value: 1.3E-19
score: 73.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..209
NoneNo IPR availablePANTHERPTHR11889HEDGEHOGcoord: 206..380
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 221..297
score: 7.935727
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 221..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:511518..512750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6385.t1Gchil6385.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 511518..512750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6385.t1 ID=Gchil6385.t1|Name=Gchil6385.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=411bp
MAHTARALSIAAVRVQTKFLRLPSVSESCASSITHVRLALYRGINGADPN
GTYDGLLWRNLRVDDKSCVSLYDALHSTFFEVRASPSPAAPVDAASPWFL
VGFDNSPRRCEMYSTRLSESYYFTDDLPRFRGRLERDGLLLRGVAQNAKS
GTIFMFTVPFSREGTLQGPSCVFVDERDAQGITSDVAADSDANTETEAEA
ETDAAATPEALQDVDEDGAVCLAGDVLVQLDDGTLRRMDALQRGDRVRAP
RGHDTVISLSHADATMRTKFIQLCVLVTGAETTLTTLTLTPGHLLLARNG
EAFAAREARAGSALRAVDGVRAVVNSTKTVWRRGVYSPLTRQGVLVLRGG
VVVSCYSELLHERVAHAMLTPVRALRLRVDWGAAVAAALRAAYVARARYS
ALPRRRCRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001767Hedgehog_Hint
IPR006141Intein_N
IPR036844Hint_dom_sf