Gchil6329.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6329.t1
Unique NameGchil6329.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length597
Homology
BLAST of Gchil6329.t1 vs. uniprot
Match: A0A2V3J1E6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1E6_9FLOR)

HSP 1 Score: 550 bits (1418), Expect = 1.400e-187
Identity = 351/627 (55.98%), Postives = 409/627 (65.23%), Query Frame = 0
Query:    1 MQAPPLFEFLPGARRGSADSEQSFETAASSRRSFRTHPHPDPVLMARLKALNFSSAP---KRTPTNHPNLNSPVYPLSPCSPSLPRRFSSCHASTTSTAEKPTAPAPSK--ASMHHLPPLSPLSSMYDPNSTSASGSEEDASSSTSSDSAP--ASLVHTRSMCDHRLRPSLLHRQAINAPAPASPVHNPHPQAPFRKALSQRHPASADLPAALRHRFSLD------HASIAAAPPV---TPLRNPYDSF-----------SSNFDIPRGKVQHLPSKPRPSTPSRLPRSKVFIRQNSTRSSVVDAAAVRHVPAAPGHHP---VEPQLVPRHVPLTPSQHFAMACEQQQRQLQLQHSEHNNSLLPVGQFSAQITNVAEDQMYFSDEDEFDSQLLDTAKSPLAHNSPSDALSTKVRRAVSALRSISFQSNQVEDFDTAWGQTLSVSQEKQNPSLASVASAKWRRARNKPVNRATRKQFECYSENDAGSERSSSSNVSQVRDRSMNAPNNIRGFAAMRMRANFGGPHKRSLWAGSRRDRQ-QPHAVAAQLLVSGGGQGFLAASTELAEQRQALATVAPADAMDGRNSMQKGPVDKYVEFIHASAQRETKGRFGPRNFPSRVLRLFRRKWN 596
            M++P L  FLP  RR S DS QSFETA S+ RS       DPVLMARLKALN SS P   ++TP +                SL RR  S +AS+TS ++KP     +   AS+H L           P+                       A+L HT+SMCD RLR SLLH    NAP   +  H  + Q PFRKALS R  + ADLP ALRHRFSLD       A++A +  V   TP RN  +             + NFD+PRGKV+HLP+  RP+TPSRLPR KVFIRQ+ +R SVVD  AVRH      H P   +EPQLV R +PL+P  +   +            S+  +  +   QFSA+ITNV+E+ MY+SDEDEFDSQL+D A SPL  NSPSD LSTKVRRAVSALRSISFQS Q+EDFDTAWGQ LSVSQEK NPS AS+ASAKWRRAR+K  +R   K+FECYSENDA S RSS SN S  ++RS N  + +RGFAAMRMR N  GPHKRSLWAG+RRDR+ QPHAVAAQLLVSGGGQG LAAS E++EQRQALATVAPADA+D RN  QKG VDKYVEFIHASAQRE KG+FGPR+FP RVLRLFRRKWN
Sbjct:    1 MESPSLV-FLPMHRRPSTDSTQSFETAPSTHRSVIPDSPGDPVLMARLKALNLSSVPPELRQTPLSPQKXXXXXXXXXXXXXSLNRRSVSSNASSTSASDKPHIVPNNNPSASIHDLXXXXXXXXXXXPHXXXXXXXXXXXXXXXXXXXXXXVATLTHTQSMCDDRLRNSLLHSHITNAPRSRNRFHPQNSQTPFRKALSHRQHSPADLPPALRHRFSLDTRSNPLSAAVARSKAVDHFTPHRNHSERLVPAIRMHSTASTRNFDLPRGKVEHLPAVSRPATPSRLPRPKVFIRQSPSRPSVVDPVAVRHF----DHDPELSLEPQLVTRELPLSPLPNLPQSTLS---------SQPLDDFVRENQFSAKITNVSEEHMYYSDEDEFDSQLVDHANSPLKDNSPSDVLSTKVRRAVSALRSISFQSTQIEDFDTAWGQALSVSQEKPNPSFASLASAKWRRARSKASSRMGGKEFECYSENDACSMRSSGSNFSSQKERSTNGRDQVRGFAAMRMR-NLSGPHKRSLWAGARRDRERQPHAVAAQLLVSGGGQGLLAASAEMSEQRQALATVAPADAVDARNGTQKGSVDKYVEFIHASAQREAKGKFGPRHFPGRVLRLFRRKWN 612          
BLAST of Gchil6329.t1 vs. uniprot
Match: R7QG93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG93_CHOCR)

HSP 1 Score: 145 bits (366), Expect = 3.990e-35
Identity = 133/374 (35.56%), Postives = 195/374 (52.14%), Query Frame = 0
Query:  239 IPRGKVQHLPSKPRPSTPSRLPRSKVFIRQ---NSTRSSVVDAAAVRHVPAAPGHHPVEPQLVPRHVPLTPSQHFAMACEQQQRQLQLQHSEHNNSLLPVGQFSAQITNVAEDQMYFSDEDEFDSQLLDTAKSPLAHNS-----PSDALSTKVRRAVSALRSISFQSNQVEDFDTAWGQTLS---VSQEKQNPSLASVASAKWRRARNKPVNRATRKQFECYSENDAGSERSSSSNVSQ-VRDRSMNAPNNIRGFAAMRMRANFGGPHKRSLW-AGSRRDRQQPHAVAAQLLVSGGGQGFLAASTELAEQRQALATVAPADAMDGRNSMQKGPVDKYVEFIHASAQRETKGRFGPRNFPSRVLR----LFRRKW 595
            +PRG+V+ +P  PRP TP +LPR +VFI Q    ST  +  +   +R   +             R   +TPS   + A  + +R    +++        V Q   +     ED  YFSD DE  + + D +K+ +         P DALS+KV R +S LRSISFQ+  VED DTAWGQ  +      +K   ++ S AS +WRR R +  ++   ++FECYSE DA S  S +S+    +  R  N  + ++    +       G H +++W A ++RDR  P  +    LV G GQ +LAA+T L +    +  + PA+  + ++S ++  VDKYVEFIHASAQRE+K +   RNF  RVL     LFRRKW
Sbjct:    1 MPRGRVECIPRPPRPETPRQLPRPRVFISQPAGKSTNDTDFEGFMMRERYS---------DATSRSETITPSTSESSASSRPRRSSGWENAPEKT----VTQLLQE-----EDDYYFSD-DESVAGVKDLSKNLIKRADFAAVIPGDALSSKVHRVLSNLRSISFQNPAVEDPDTAWGQASAHRPALTKKSANNICSTAS-RWRRPRGRISSKNGVQEFECYSEADAASMHSYTSSAKHPIPTRRYNHRDALKSIQGLT------GRHHKNIWNAATKRDRTSP--ITPNFLV-GTGQDYLAAATTLNQPLHTVTAMVPAEP-ESQDSRRRS-VDKYVEFIHASAQRESKNKLLSRNFTGRVLHRAQGLFRRKW 343          
The following BLAST results are available for this feature:
BLAST of Gchil6329.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1E6_9FLOR1.400e-18755.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG93_CHOCR3.990e-3535.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:128898..130688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6329.t1Gchil6329.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 128898..130688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6329.t1 ID=Gchil6329.t1|Name=Gchil6329.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=597bp
MQAPPLFEFLPGARRGSADSEQSFETAASSRRSFRTHPHPDPVLMARLKA
LNFSSAPKRTPTNHPNLNSPVYPLSPCSPSLPRRFSSCHASTTSTAEKPT
APAPSKASMHHLPPLSPLSSMYDPNSTSASGSEEDASSSTSSDSAPASLV
HTRSMCDHRLRPSLLHRQAINAPAPASPVHNPHPQAPFRKALSQRHPASA
DLPAALRHRFSLDHASIAAAPPVTPLRNPYDSFSSNFDIPRGKVQHLPSK
PRPSTPSRLPRSKVFIRQNSTRSSVVDAAAVRHVPAAPGHHPVEPQLVPR
HVPLTPSQHFAMACEQQQRQLQLQHSEHNNSLLPVGQFSAQITNVAEDQM
YFSDEDEFDSQLLDTAKSPLAHNSPSDALSTKVRRAVSALRSISFQSNQV
EDFDTAWGQTLSVSQEKQNPSLASVASAKWRRARNKPVNRATRKQFECYS
ENDAGSERSSSSNVSQVRDRSMNAPNNIRGFAAMRMRANFGGPHKRSLWA
GSRRDRQQPHAVAAQLLVSGGGQGFLAASTELAEQRQALATVAPADAMDG
RNSMQKGPVDKYVEFIHASAQRETKGRFGPRNFPSRVLRLFRRKWN*
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