Gchil6321.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6321.t1
Unique NameGchil6321.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length266
Homology
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A2V3J1G6_9FLOR (Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G6_9FLOR)

HSP 1 Score: 259 bits (661), Expect = 2.870e-83
Identity = 144/254 (56.69%), Postives = 181/254 (71.26%), Query Frame = 0
Query:   14 ASRRRQRRKRQYFTMALEQLTPEQ-IMLPSTASRLLLLRPQFEPPSCSAADNYNSLFIVRALSDVLERTCERNASCTLHPNPHIDARTTSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEYDTAVFSANADER---------VVDAQAAVALESAAVMAARTLSMMTSA 257
            +SR    RKR +  MALE L+PEQ ++  ++AS   +   +FEP S      Y+  +I  ALS+VL+RTC+RN  C L  NP +DAR+T+MFY+   APFSLSCYVF L++RL+LSRSVY+VAL++LDRVRLVDQ+LCL H+NVHR+LATALC+ADKY+EDE HRN+  C I G+  +AELN+ME  FL R+QWNCWVS  TF EY+ A+F  NA               A AAVAL +AAV AARTLSMMTSA
Sbjct:    5 SSRHAVARKRHWLAMALEHLSPEQRVICSNSASVYAVHHAEFEP-SPQPTSAYSYAYIGEALSNVLQRTCDRNGGCVLQANPRLDARSTNMFYNSCAAPFSLSCYVFHLLSRLKLSRSVYVVALIYLDRVRLVDQKLCLTHMNVHRILATALCLADKYVEDESHRNNALCCIMGMSHVAELNAMEAAFLHRIQWNCWVSEHTFCEYEHALFGRNAPSPPHSSSAPAPADHAHAAVALHTAAVDAARTLSMMTSA 257          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A1X6NWM5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWM5_PORUM)

HSP 1 Score: 98.6 bits (244), Expect = 1.200e-19
Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = 0
Query:  102 SMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEY--DTAVFSANAD 228
            S+F+S      S++ YV +L+  + +S SV+IVALV+LDR+   D RL L  LN+HR+L  A+ +A K++ED  HRNS    + GIPS  E+N +E E LRRL W   VS + F+ Y  + A+++A +D
Sbjct:  440 SIFFSLVKPSVSVAFYVARLLRYVHVSPSVFIVALVYLDRLGAGDARLLLTPLNMHRLLLAAVTLASKFVEDRAHRNSWLARVGGIPSQTEMNRLEVETLRRLDWRLAVSPDVFDMYRRNLALWAAASD 568          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A1X6NRH4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRH4_PORUM)

HSP 1 Score: 96.3 bits (238), Expect = 5.880e-19
Identity = 57/155 (36.77%), Postives = 86/155 (55.48%), Query Frame = 0
Query:   73 ALSDVLERTCERNASCTLHPNPHIDARTTSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEYDTAVFSANA 227
            A+S VL R  + NA  + H  P       S F+S +  PF+L  YV +LVT  + SRS Y+ A V+LDR+  V   L +  +NVHR+L +AL VA K L+D+ +  + +C + GIPS+ E  ++E   LR L +   V  + +  Y+  +  A A
Sbjct:  358 AISSVLGRWIDANAHASGHRPPPASDDPLSQFFSSSRQPFTLLYYVRRLVTHTRCSRSAYVAAFVYLDRLAAVAPALAVRSMNVHRLLLSALVVAVKVLDDDVYSAAYYCRVGGIPSVGEYVALEATLLRLLGFRVAVGVDVYHAYEKGILRAAA 512          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A2V3IT02_9FLOR (Cyclin-P3-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT02_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 3.660e-15
Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = 0
Query:   64 NYNSLFIVRALSDVLERTCERNASCTLHPNPHI-DARTTSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEY 218
            ++N   +V AL   L   C RN        PH  ++     F+S    PF L+ YV +LV     S S +I+AL++L++V+ V  +L L  +N+HR+++TAL +A KYL+D+   N+ +  +AG+ + AE+N +E   L  L W   VS  TF  +
Sbjct:  117 DWNDDQLVSALCAHLSAVCHRNEQAA--DTPHTTNSDKYHHFFSQYRQPFHLTFYVTRLVQYSNTSPSAFILALIYLEKVKSVAPQLALTDMNLHRLVSTALVLAIKYLDDQVFSNAYYARVAGVTT-AEINQLELSMLTLLNWQLSVSTSTFSAH 269          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A7S0T7Z7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7Z7_9RHOD)

HSP 1 Score: 81.3 bits (199), Expect = 1.530e-14
Identity = 45/123 (36.59%), Postives = 71/123 (57.72%), Query Frame = 0
Query:  104 FYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEYDTAVFSAN 226
            FYS    PF +  YV +L   +  S S +I+AL++LDRVR  +  L L  L+VHR++ TAL VA K+++D    N  +  + G+ S+ E+N +E  FL  L +  + SA+ F     AV +++
Sbjct:  137 FYSIEAQPFPMEFYVQRLAKHMGCSSSAFIMALIYLDRVRRRNSLLQLSSLSVHRLVLTALVVAAKFVDDSVFENKWYAVVGGLESVQEMNKLERIFLGELDFRLYCSADEFNLTKEAVMASD 259          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A7S1T5I1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5I1_9RHOD)

HSP 1 Score: 80.5 bits (197), Expect = 1.960e-14
Identity = 52/155 (33.55%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   71 VRALSDVLERTCERNASCTLHPNPHIDARTTSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEYDTAVFSA 225
            VRAL+ +L   C  N       N       T MF+S       L+ YV +LV   + SRSV+IVAL++L R+      L    LN+HR+L T + +A K++ED    N  F    G+ ++ E+N +E   L  L++  +VS+E +E Y+  +  A
Sbjct:   80 VRALTKILSTLCTSNEDRIKLENVR---DVTRMFFSVRKPGIPLNTYVKRLVKHSRCSRSVFIVALIYLQRLEAAWPTLGATELNIHRLLTTCIMIAAKFVEDVHLNNLHFARAGGVSNVVEMNRLEATALALLKFQTFVSSEEYERYEKLLIRA 231          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A7S1TIJ0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIJ0_9RHOD)

HSP 1 Score: 79.0 bits (193), Expect = 3.100e-14
Identity = 47/147 (31.97%), Postives = 87/147 (59.18%), Query Frame = 0
Query:   73 ALSDVLERTCERNASCTLHPNPHIDARTTSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVR-LVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEY 218
            +++  L+  C+ N    +   PH +  + S+FYS     FSL  YV +L+ R + SRS +++AL++L RV+    ++  ++  NVHR+  TAL +A K+L++  + N  +  + G+ SL E+N +E E LR L ++ +VS + ++ +
Sbjct:   40 SVTSALDYLCKSNEP--VGEVPH-ELDSASLFYSRASQSFSLDWYVERLIRRAECSRSAFVLALIYLLRVQDKGKEKYFVVERNVHRLFLTALVLAIKFLDEPIYDNGFYARVGGLSSLREMNDLEKEMLRVLNFDVFVSEDEYDYF 183          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A5J4YXN5_PORPP (Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXN5_PORPP)

HSP 1 Score: 79.7 bits (195), Expect = 5.240e-14
Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 0
Query:  103 MFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEYDTAVFS 224
            +FYS     F+L  Y+ ++VT +  S S++I+AL FL R R  D  L L   NVHR+  TA+ +A K LEDE + N  +  + G+PSL E+N +E + L++L ++  V    + E    V +
Sbjct:  134 IFYSAQKQKFALVKYIQRVVTLVSGSSSIFILALCFLQRARKADTLLALHDYNVHRLWITAVVLASKMLEDEVYSNEHYAKMGGVPSLVEMNRLEAQLLKKLNFSLCVPETEYLEMRARVLA 255          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A7S1TBQ8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBQ8_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 1.950e-13
Identity = 47/150 (31.33%), Postives = 86/150 (57.33%), Query Frame = 0
Query:   70 IVRALSDVLERTCERNASCTLHPNPHIDARTTSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEYD 219
            + R +S +L  +CE N S   +P+P    ++T MF++      S+  YV +++   + S+SV+ VALV+L+R    +  L L  LNVHR+  TA+ ++ K+ EDEC+ N  +  + G+  L E+N++E   L+ +Q+   V  + ++  +
Sbjct:   40 MARNISLILSSSCESNKSAR-YPHP---PQSTVMFFAKKTPDVSILYYVERIIQYFECSKSVFYVALVYLERAGRAEPSLRLNLLNVHRLFLTAMVLSAKFCEDECYTNQHYAMVGGV-GLNEMNTLELALLQVMQFKLHVPHQEYQRVE 184          
BLAST of Gchil6321.t1 vs. uniprot
Match: A0A4Q9NS80_9APHY (Cyclin-domain-containing protein n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9NS80_9APHY)

HSP 1 Score: 75.5 bits (184), Expect = 2.480e-12
Identity = 44/149 (29.53%), Postives = 78/149 (52.35%), Query Frame = 0
Query:   70 IVRALSDVLERTCERNASCTLHPNPHIDARTTSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLCLIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEFLRRLQWNCWVSAETFEEY 218
            + R ++D++ER    N    L P      ++ + F+S +    S+  Y+ +++   +  RS  ++ L ++D++ +      L  L  HR + T++CV+ K L D  H NS +  + GIP + ELN +E EFLR + WN   + E  +EY
Sbjct:   21 LARLIADMMERLMAHNDQIPLSP------KSLTRFHSRSAPGISVLDYLRRIIKFTKAERSCLLITLHYIDQISVRMPVFVLSSLTCHRFVITSICVSSKCLCDAFHSNSVYAKVGGIP-VTELNVLEREFLRMIDWNLTCTREVLQEY 162          
The following BLAST results are available for this feature:
BLAST of Gchil6321.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1G6_9FLOR2.870e-8356.69Cyclin-U2-2 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A1X6NWM5_PORUM1.200e-1943.41Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NRH4_PORUM5.880e-1936.77Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IT02_9FLOR3.660e-1534.62Cyclin-P3-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0A7S0T7Z7_9RHOD1.530e-1436.59Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S1T5I1_9RHOD1.960e-1433.55Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TIJ0_9RHOD3.100e-1431.97Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YXN5_PORPP5.240e-1436.89Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=3... [more]
A0A7S1TBQ8_9RHOD1.950e-1331.33Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A4Q9NS80_9APHY2.480e-1229.53Cyclin-domain-containing protein n=3 Tax=Dichomitu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 60..262
e-value: 1.1E-35
score: 125.0
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 99..207
e-value: 1.6E-18
score: 67.6
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 68..223
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 114..201
e-value: 0.00209509
score: 34.5217
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 116..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:106571..107368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6321.t1Gchil6321.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000196_pilon 106571..107368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6321.t1 ID=Gchil6321.t1|Name=Gchil6321.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=266bp
MPPLSSTHAQLLPASRRRQRRKRQYFTMALEQLTPEQIMLPSTASRLLLL
RPQFEPPSCSAADNYNSLFIVRALSDVLERTCERNASCTLHPNPHIDART
TSMFYSCTVAPFSLSCYVFQLVTRLQLSRSVYIVALVFLDRVRLVDQRLC
LIHLNVHRVLATALCVADKYLEDECHRNSTFCTIAGIPSLAELNSMEHEF
LRRLQWNCWVSAETFEEYDTAVFSANADERVVDAQAAVALESAAVMAART
LSMMTSATATTTSHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR013763Cyclin-like
IPR036915Cyclin-like_sf