Gchil632.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil632.t1
Unique NameGchil632.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length300
Homology
BLAST of Gchil632.t1 vs. uniprot
Match: R7QB71_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB71_CHOCR)

HSP 1 Score: 166 bits (419), Expect = 6.700e-46
Identity = 96/239 (40.17%), Postives = 146/239 (61.09%), Query Frame = 0
Query:    2 MIGTSLLLTPSILLLYQTTVELDPVSIHLARVVGLLLLSSSFVSHRAFSSRDRLDKYVVILSRAMTALLFLSISIYARIHYPEWSDELLYTSCMGSFFWLLPHLFYAVSALPLGRTDSIRVSISLVIDFFLTVAAGFLWFGFPQAMLRMLIRLNLNSVSVTISRFLGALLIGNALSSILAAGLCSVRTKQYLFSVKIITAIGLIVLVVFGHAWGESFITSHILIGSAATVLWGLNSALG 240
            ++  SLLLTPS LL YQT V LD +S+HLAR++GLLLLSSS  +HRAF++R   ++     SRA+TAL+    +++AR HYP W+    + +  G+  W  PH ++A+S +     +   V   L +D+F+TVA G     FP A+LR L  +  N+VSVT++R L A+LIG A  S       S+  K+++   +++TA  +++L+  G AW   F    + +G+ A ++WG NSALG
Sbjct:   31 LVSISLLLTPSHLLSYQTDVRLDRLSLHLARLIGLLLLSSSLHTHRAFTTRTLQERAAASSSRALTALILFLCAVHARHHYPAWNFRFAHLTATGAACWFAPHFYFALSTVSTATPEPRGVVALLFLDYFMTVAVGLACLAFPHAVLRTLSDVPPNAVSVTLARVLAAILIGLAAVSQAGMAYASLEAKRHVHLTRLLTAGPVLILLCLGWAW-RCFNDVGLFVGAGAAIVWGANSALG 268          
BLAST of Gchil632.t1 vs. uniprot
Match: A0A6J8E0M3_MYTCO (Uncharacterized protein n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8E0M3_MYTCO)

HSP 1 Score: 70.5 bits (171), Expect = 3.710e-10
Identity = 62/247 (25.10%), Postives = 106/247 (42.91%), Query Frame = 0
Query:    4 GTSLLLTPSILLLYQTTVELDPVSIHLARVVGLLLLSSSFVSHRAFSSRDRLDKYVVILSRAMTALLFLSISIYARIH-------YPEWSDELLYTSCMGSFFWLLPHLFYAVSALPLGR--TDSIRVSISLVIDFFLTVAAGFLWFGFPQAMLRMLIRLNLNSVSVTISRFLGALLIGNALSSILAAGLCSVRTKQYLFSVKIITAIGLIVLVVFGHAWGESFITSHILIGSAATVLWGLNSALGY 241
            G +++  P   L  QT  ELD V +HL R+ G++LLSS+  +  A  S+D+     ++  R +   L+    + ARIH         +W+ + L     G   WLL +  Y++     G+  T+  +    L  DF   +  G  +F  P+ ML       LN +  T+ R + A +    + +  +        K + F  +I+   GL+   ++      S+   HI  G     LW  N++ GY
Sbjct:   37 GLTMIFFPKHFLSRQTKGELDDVHLHLYRMCGIMLLSSTMFAWLARKSKDQTITSAILWGRVVGVSLY----VMARIHGYFQVSKSIKWNKQALLFGIYGDCLWLLGNFIYSLKVTDFGKMTTNLSKADFYLKSDFVQCIMFGISFFVMPRLMLGFQTTRTLNHLHCTLIRMMAAFVFNTGIIAWKSWHFAENIDKIWHFVSRIMGISGLVTAQIYTQFTTSSWTLWHIYFGMIGMSLWSANASFGY 279          
BLAST of Gchil632.t1 vs. uniprot
Match: A0A8B6EW00_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EW00_MYTGA)

HSP 1 Score: 68.6 bits (166), Expect = 1.300e-9
Identity = 60/247 (24.29%), Postives = 107/247 (43.32%), Query Frame = 0
Query:    4 GTSLLLTPSILLLYQTTVELDPVSIHLARVVGLLLLSSSFVSHRAFSSRDRLDKYVVILSRAMTALLFLSISIYARIH-------YPEWSDELLYTSCMGSFFWLLPHLFYAVSALPLGR--TDSIRVSISLVIDFFLTVAAGFLWFGFPQAMLRMLIRLNLNSVSVTISRFLGALLIGNALSSILAAGLCSVRTKQYLFSVKIITAIGLIVLVVFGHAWGESFITSHILIGSAATVLWGLNSALGY 241
            G +++ +P   L  QT  +LD V +H+ R+ G++LLSS+  +  A  S+D+  K  ++  R +   L+    + AR+H         +W+ + L     G   WLL +  Y++    LG+  T   +    L  DF      G  +F  P+ ML       LN +  T+ R + A +    + +  +        K + F  +++   GL+   ++      S+   HI  G     LW  N++ GY
Sbjct:   37 GLTMICSPKHFLSRQTKGKLDDVHLHMYRMCGIMLLSSTMFAWLARKSKDQNIKSAILWGRVVGVSLY----VMARVHGYFQVSKSIKWNKQALLFGIYGDCLWLLGNFVYSLKVTDLGKVTTTLSKADFYLKSDFVQCFLFGISFFIMPRLMLGFQTTKTLNHLHCTLIRMMAAFVFNTGIIAWKSLQFSENIDKIWHFVSRVMGNSGLVTAQIYAQFTTSSWTLWHIYFGMFGMSLWSANASFGY 279          
The following BLAST results are available for this feature:
BLAST of Gchil632.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7QB71_CHOCR6.700e-4640.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6J8E0M3_MYTCO3.710e-1025.10Uncharacterized protein n=2 Tax=Mytilus coruscus T... [more]
A0A8B6EW00_MYTGA1.300e-924.29Uncharacterized protein n=1 Tax=Mytilus galloprovi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 212..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 223..249
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 250..299
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..121
NoneNo IPR availableTMHMMTMhelixcoord: 229..251
NoneNo IPR availableTMHMMTMhelixcoord: 95..114
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 28..45
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:697442..698341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil632.t1Gchil632.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 697442..698341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil632.t1 ID=Gchil632.t1|Name=Gchil632.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=300bp
MMIGTSLLLTPSILLLYQTTVELDPVSIHLARVVGLLLLSSSFVSHRAFS
SRDRLDKYVVILSRAMTALLFLSISIYARIHYPEWSDELLYTSCMGSFFW
LLPHLFYAVSALPLGRTDSIRVSISLVIDFFLTVAAGFLWFGFPQAMLRM
LIRLNLNSVSVTISRFLGALLIGNALSSILAAGLCSVRTKQYLFSVKIIT
AIGLIVLVVFGHAWGESFITSHILIGSAATVLWGLNSALGYMMIAVIYAG
CYEKKRRPLHSFLSSHSVSAGDTSNAALTFSKKTGKFPRRTSFDSIIKQ*
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