Gchil624.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil624.t1
Unique NameGchil624.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length341
Homology
BLAST of Gchil624.t1 vs. uniprot
Match: A0A2V3IZX2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZX2_9FLOR)

HSP 1 Score: 369 bits (946), Expect = 3.330e-125
Identity = 195/256 (76.17%), Postives = 217/256 (84.77%), Query Frame = 0
Query:   85 KRKATDADWEKLIIEFEERSGGTKVVPPDSPILNPKQYETLPYLECAYMTALTTVLWYLGRVFRLDAVLLLFYPLPTIYIASKYGLKFADWTIMSVLFFVFTIVGPLFAITYFLNTGLLTIVYARALWWRFGWFAALLFGAAAKAVGLCLQLLFISPILRYNAWKAVVEQVTILLQNMAKLLGAVGIKMMAPTASAVQIALIIVIAFHSLYHVFFTLLMSSIVLRRIEADVELKRSPVKMPLVDALIRNAKNMRRR 340
            KRKAT  +W +LI EFEERSGG+KVVPPD PILNP Q+E+LPY+ECAYMTAL TVLWYLGR+ RLDA LLLFYPLPT+YIASKYGL FA  TI+S LFFVFTIVGP FA+TY LNTGLLT VYARA+W+R GW A LL GAAAKAVGLCLQLLFI+PILRYNAWKAV EQVT+LL+N  KLL  VGI + AP+  AVQIA+IIVI  H +YHVFFTLLM++I LRRIE +VELKRSP  MP VDALIRNAK  RRR
Sbjct:   13 KRKATAEEWHELIREFEERSGGSKVVPPDKPILNPAQFESLPYIECAYMTALATVLWYLGRMLRLDAFLLLFYPLPTMYIASKYGLSFATCTILSTLFFVFTIVGPFFAVTYLLNTGLLTAVYARAIWFRLGWRATLLSGAAAKAVGLCLQLLFITPILRYNAWKAVTEQVTLLLENSIKLLKFVGISLTAPSIGAVQIAIIIVIVLHCIYHVFFTLLMANIFLRRIEEEVELKRSPPSMPFVDALIRNAKRTRRR 268          
BLAST of Gchil624.t1 vs. uniprot
Match: R7QA90_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA90_CHOCR)

HSP 1 Score: 232 bits (592), Expect = 6.740e-71
Identity = 136/267 (50.94%), Postives = 181/267 (67.79%), Query Frame = 0
Query:   77 SRPVQDQRKRKATDADWEKLIIEFEERSGGT---KVVPPDSPI--LNPKQYETLPYLECAYMTALTTVLWYLGRVFRLDAVLLLFYPLPTIYIASKYGLKFADWTIMSVLFFVFTIVGPLFAITYFLNTGLLTIVYARALWWRFGWFAALLFGAAAKAVGLCLQLLFISPILRYNAWKAVVEQVTILLQNMA----KLLGAVGIKMMAPTASAVQIALIIVIAFHSLYHVFFTLLMSSIVLRRIEADVELKRSPVKMPLVDALIRNA 334
            SRP +   K + TD +W +LI+EFE+R+      + +PP   +  L+P Q+E+L Y+ C  MTA+TTV WYLGR+ R+D+VLLLFYPLP +Y+AS++GL+FAD T++  +F +FT++GPL+A  YFLNTGLL + Y+RALW+R+GW   LL G  AK VGL LQL +IS ILRYNAWKA   QVT +L  M     K+LG V      P  SAVQ  L +V+  HS YHVFFTLL  SI+L R+ A   L R P  +P V+ L++ A
Sbjct:   53 SRPPRAAPKPEITDEEWRQLILEFEQRADDKYDPEAIPPAGRLGRLDPAQFESLSYVFCGAMTAITTVFWYLGRILRMDSVLLLFYPLPAMYVASRFGLRFADLTLLCSVFLIFTVMGPLYAGLYFLNTGLLILTYSRALWYRWGWKLTLLGGGLAKGVGLALQLAWISVILRYNAWKAAAIQVTAMLTFMGNIANKVLGRVVFG--EPGMSAVQAGLSVVVVLHSFYHVFFTLLFMSILLTRLRAH--LVREPPDVPGVEWLLKRA 315          
BLAST of Gchil624.t1 vs. uniprot
Match: A0A5J4YXQ9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXQ9_PORPP)

HSP 1 Score: 114 bits (284), Expect = 3.760e-25
Identity = 82/265 (30.94%), Postives = 140/265 (52.83%), Query Frame = 0
Query:   89 TDADWEKLIIEFEERS-----GGTK---------VVPPDSPILNPKQYETLPYLECAYMTALTTVLWYLGRVFRLDAVLLLFYPLPTIYIASKYGLKFADWTIMSVLFFVFTIVGPLFAITYFLNTGLLTIVYARALWWRFGWFAALLFGAAAKAVGLCLQLLFISPILRYNAWKAVVEQVTILLQNMAKLL-------GAV--GIKMMAPTASAVQIALIIVIAFHSLYHVFFTLLMSSIVLRRIEADVELKRSPVKMPLVDAL 330
            T  +W++L+ EFE R+     GG +         VV       NP+ Y ++P +E A+M AL  VLW+LGR  +LDA L+L YPLP   +A ++GL++A    +     +   +G LF I+Y  N G+++I++A  +     W   L+ G+  K  G+ + +     + R + W  V +Q   + + + K++       GAV   +K+ APT++A+  A++ ++ F S+Y  FFT L+SS VL        L++    +P+V+ L
Sbjct:   80 TGREWDELVQEFETRAEQAGNGGVQPLDLRDELAVVNGQFGQRNPQVYASMPVIETAFMAALMVVLWFLGRYLKLDAFLVLTYPLPIFLLALRWGLRYAAVGFLMACLMISLQMGLLFGISYLCNQGVMSIMFAIGMLLPIHWCFVLVLGSLGKMTGILMSIQISGFVFREDIWDLVRKQAVAVCETVMKVIAASKAKGGAVPEAVKIGAPTSAAINRAMLGLLVFSSVYSAFFTYLISSFVLENY--SYMLRKRVTLIPVVEYL 342          
BLAST of Gchil624.t1 vs. uniprot
Match: A0A7S1ERG0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERG0_9RHOD)

HSP 1 Score: 111 bits (278), Expect = 1.980e-24
Identity = 78/236 (33.05%), Postives = 135/236 (57.20%), Query Frame = 0
Query:   92 DWEKLIIEFEERS---GGTKVVPP--------DSPI---LNPKQYETLPYLECAYMTALTTVLWYLGRVFRLDAVLLLFYPLPTIYIASKYGLKFADWTIMSVLFFVFTIVGPLFAITYFLNTGLLTIVYARALWWRFGWFAALLFGAAAKAVGLCLQLLFISPILRYNAWKAVVEQV----TILLQNMAKLLGAVGIKMMA-PTASAVQIALIIVIAFHSLYHVFFTLLMSSIVL 308
            +W++LI EFE R+   GG +   P        +S I   LNP+  +  P +E + M +L T+LW+ GR  RLDA+L+LFYPLP + +A ++G K+A  T+ + L  +   +G L+++++  NTGL+ ++ + A+  R  W   L  G+  K +G  + L       + + W    +QV    +   ++MAK+ G+  ++ +A P+A+ V  A++ ++ F +LYH FFT L +SI+L
Sbjct:   66 EWDELIDEFELRAIKTGGNRSRAPSIRDQIGAESTIFAQLNPEALKYSPVVESSCMGSLLTILWFFGRFLRLDALLVLFYPLPIMLVALRWGPKYAILTLATGLCIMSIDLGVLYSVSFLFNTGLMGLLLSGAMALRLPWILVLAAGSLGKCIGFIVNLKVQGAFFKTDLWGLTRDQVVKICSTFAESMAKISGSPVVESVAGPSAATVNSAMLGLLFFSALYHAFFTYLSASIIL 301          
BLAST of Gchil624.t1 vs. uniprot
Match: F2D0B9_HORVV (Predicted protein (Fragment) n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2D0B9_HORVV)

HSP 1 Score: 58.5 bits (140), Expect = 4.610e-6
Identity = 50/213 (23.47%), Postives = 108/213 (50.70%), Query Frame = 0
Query:  101 EERSGGTKVVPPDSPILNPKQYETLPYLECAYMTALTTVLWYLGRVFRLDAVLLLFYPLPTIYIASKYGLKFADWTIMSVLFFVFTIVGPLFAITYFLNTGLLTIVYARALWWRF--GWFAALLFGAAAKAVGLCLQLLFISPILRYNAWKAVVEQVTILLQNMAKLLGAVGIKMMAPTASAVQIALIIVIAFHSLYHVFFTLLMSSIVLRRI 311
            EER G  +    +   L+    +T   +ECA   ++  + ++L     ++     F+PLP +  + ++GL+    T+++ +  +FT+ GP+ A+TY L  G++ +  +    WR    W A+++  A  +AVG C  +L  S ++R N ++ +   +     ++  +L A G+ M+ P+  A+ +    ++  +S + VF   ++ +I L ++
Sbjct:   88 EERRGADE--DEEGADLHEALTKTRRLVECAMFASVAGLAYFLSNSLAIENYFSCFFPLPILISSLRWGLEAGRKTMVATVLLLFTLSGPVKALTYLLMHGVVGL--SMGTMWRLETNWIASIIICAIIRAVGACGYVLVTSFLIRENIFQLITVNIH---ASLTYILAAAGVNMI-PSMDAIYVIFGTLVLLNSGFFVFILHIIYTIFLTKL 292          
The following BLAST results are available for this feature:
BLAST of Gchil624.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IZX2_9FLOR3.330e-12576.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QA90_CHOCR6.740e-7150.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YXQ9_PORPP3.760e-2530.94Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1ERG0_9RHOD1.980e-2433.05Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
F2D0B9_HORVV4.610e-623.47Predicted protein (Fragment) n=2 Tax=Hordeum vulga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018710Protein of unknown function DUF2232PFAMPF09991DUF2232coord: 149..315
e-value: 3.3E-11
score: 42.9
NoneNo IPR availablePANTHERPTHR37185FAMILY NOT NAMEDcoord: 110..311
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 240..282
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 309..340
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 283..308
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..239
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 146..165
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 280..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:676046..677068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil624.t1Gchil624.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 676046..677068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil624.t1 ID=Gchil624.t1|Name=Gchil624.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=341bp
MTHLLTKGKSTSKDLSINRAFRIGASSSCFVVGATSVQIYRDPPRGDSRF
RYTPACSFQSGPPVFSRIRRWFNRKQSRPVQDQRKRKATDADWEKLIIEF
EERSGGTKVVPPDSPILNPKQYETLPYLECAYMTALTTVLWYLGRVFRLD
AVLLLFYPLPTIYIASKYGLKFADWTIMSVLFFVFTIVGPLFAITYFLNT
GLLTIVYARALWWRFGWFAALLFGAAAKAVGLCLQLLFISPILRYNAWKA
VVEQVTILLQNMAKLLGAVGIKMMAPTASAVQIALIIVIAFHSLYHVFFT
LLMSSIVLRRIEADVELKRSPVKMPLVDALIRNAKNMRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018710DUF2232