Gchil596.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil596.t1
Unique Name	Gchil596.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	329

Homology

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BLAST of Gchil596.t1 vs. uniprot
Match: A0A2V3J0S4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0S4_9FLOR)

HSP 1 Score: 365 bits (938), Expect = 2.570e-122
Identity = 183/300 (61.00%), Postives = 228/300 (76.00%), Query Frame = 0

Query:   17 SPLLFPPERIPLAPAHIDHNASTPSAYESPTPPSSPSIDFPYGAVARAMSPSLDTDAPRERRTLRVSDPLQTVHLITDSSQSDHSHQPYLDRSQVELAQFRQRITDTTILAFAVFVVTGIVFVIMTTGFTAMVANQNSARLQIYSAWPDGGVIPPEYGCLAPDGVPISIPLHWQDVPPEATNLVILFSHPGAFHIAEVDPVHWFVMGIPIGPGHSDHIPPNASINPSLLPHGAIQRPNAYSHQGYYWPPCTNATGDFTILAYAVEAPAVIEDLHDAREIMMRFDGVPFARLSGTYT-HAP 315
            SPLL P ERIPLAPAH DHNASTPSAYESP+PP+SPS ++PYGAVAR +  S  T   + RR   ++DP QTVHLITDSS S++S   Y+D +++E+++ RQR+ DT IL   +  +T IV VIM +G   MVAN+NSA+L+I+S WPDGGVIP +YGC A    PISIPL W++VP  ATNL++LFSHPGA H + VDPVHWFV  I +       + PNAS+N +L+P GA+QR NA+SHQGYYWPPC+N T  FT+ AYAVEAPAVIED +DAREI+MR DGVP A+L GTY+ H+P
Sbjct:   15 SPLLSPSERIPLAPAHTDHNASTPSAYESPSPPTSPSTEYPYGAVARVVPDSYVT---QNRRLNGLADPQQTVHLITDSSASEYSADRYVDHTRLEISRLRQRLMDTYILGAVIVAITTIVSVIMASGLATMVANRNSAKLEIFSDWPDGGVIPLKYGCHAHGHHPISIPLRWENVPASATNLIVLFSHPGALHDSTVDPVHWFVTNIRLDEAAPSFMAPNASVNAALMPGGAVQRANAFSHQGYYWPPCSNTTSVFTVHAYAVEAPAVIEDTYDAREIIMRLDGVPGAKLHGTYSRHSP 311

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BLAST of Gchil596.t1 vs. uniprot
Match: R7Q6F2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6F2_CHOCR)

HSP 1 Score: 218 bits (555), Expect = 2.800e-64
Identity = 114/245 (46.53%), Postives = 155/245 (63.27%), Query Frame = 0

Query:   68 SLDTDAPRERRTLRVSDPLQTVHLITDSSQSDHSHQPYLDRSQVELAQFRQRITDTTILAFAVFVVTGIVFVIMTTGFTAMVANQNSARLQIYSAWPDGGVIPPEYGCLAPDGVPISIPLHWQDVPPEATNLVILFSHPGAFHIAEVDPVHWFVMGIPIGPGHSDHIPPNASINPSLLPHGAIQRPNAYSHQGYYWPPC-TNATGDFTILAYAVEAPAVIEDLHDAREIMMRFDGVPFARLSGTY 311
            +L  DAP +  ++  S+ L         S++D          +    + R+ + D  IL  +V V+T IVFVI+ +G T ++AN+N  +L+++S WP+GG+IP +YGC APDG P+SIPL W++VP  ATNLV+LF++PGA     +DPVHWF+  IP+       IP NAS+NP L+P  + QR NA S +G YWPPC TN T  F +  YA+EAP VI D  DAREIM RF GVP ARL+G Y
Sbjct:  111 ALMRDAPLDNHSVSASELLSR-------SRADLERARLASTREYSRRELREGMKDRYILGCSVLVMTAIVFVIIVSGMTTILANRNYPQLEVFSDWPNGGLIPLKYGCHAPDGHPVSIPLRWRNVPRAATNLVVLFANPGAISKRRMDPVHWFITDIPLEDDKDGSIPANASLNPELMPPNSKQRANAGSSKGVYWPPCVTNGTSFFIVHIYAIEAPPVISDFRDAREIMNRFVGVPVARLTGWY 348

The following BLAST results are available for this feature:

BLAST of Gchil596.t1 vs. uniprot

BLAST of Gchil596.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J0S4_9FLOR	2.570e-122	61.00	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q6F2_CHOCR	2.800e-64	46.53	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 141..312 e-value: 5.1E-14 score: 54.3
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 161..283
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 169..287 e-value: 2.6E-5 score: 24.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 151..328
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 125..150
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..124
None	No IPR available	TMHMM	TMhelix		coord: 125..147

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004380_pilon	contig	tig00004380_pilon:450253..451239 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil596.t1	Gchil596.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004380_pilon 450253..451239 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil596.t1 ID=Gchil596.t1|Name=Gchil596.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=329bp
MGKDRDEAPPPHPPACSPLLFPPERIPLAPAHIDHNASTPSAYESPTPPS
SPSIDFPYGAVARAMSPSLDTDAPRERRTLRVSDPLQTVHLITDSSQSDH
SHQPYLDRSQVELAQFRQRITDTTILAFAVFVVTGIVFVIMTTGFTAMVA
NQNSARLQIYSAWPDGGVIPPEYGCLAPDGVPISIPLHWQDVPPEATNLV
ILFSHPGAFHIAEVDPVHWFVMGIPIGPGHSDHIPPNASINPSLLPHGAI
QRPNAYSHQGYYWPPCTNATGDFTILAYAVEAPAVIEDLHDAREIMMRFD
GVPFARLSGTYTHAPLHQNGHVPYSWHA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036610	PEBP-like_sf
IPR008914	PEBP