Gchil5908.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A2V3IWW6_9FLOR (DNA polymerase alpha subunit B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWW6_9FLOR) HSP 1 Score: 612 bits (1577), Expect = 8.020e-204 Identity = 335/644 (52.02%), Postives = 426/644 (66.15%), Query Frame = 0
Query: 9 SFKLGGAALPRSLSAIAHSICEQNAITADQLDCKWEAWALANSHSTGLPSEEEFRAFAAHLRQKALKASVFKSTPPPRKSSLLHSPGPTPTRVNNIDEFFNYLSDEAKKEVRVKAEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAQVKPHDVNHLPGDDKQDEQYANRTGSGRVEASLDNSEATPHNPLSRDLLGPIHVQPFTPHQPHT--RYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREV--------KMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDEL-VPQFVLIPALEDVHHDFVCPQPAFRWPFAQ-VEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLAS-RESDGGTYAEIALPLHNS 639
SF+LG LP + + IA +IC +NA++A+QL CKWEAWALAN ST LP+E++ A AAH+R K+ P P S LL P PTPTR++ ID+FF Y+ A+ ++ PE P + H + LPGD D YA R SGRVEA N +TPHNP++R GP+ + P+ P T RYM++ V QR+ VR +T+ ++IL R+K R +MP LS GSP +L+ GRIRTEL+E+D+ A IN SV+LE EDGH IKL+L R++ NK PFF+ PGM+V+VEGVNTNG+L VHAIYDNAM +EQRH Q K E ME + HSQPYA I+AAGPF+ +NLKYEPL+DLL I++R KP +VILTGPFVE+SH HIS +TP+ ++ +FV R+ L T++ M E +P FV+IPALEDVHH FVCPQP F WP + ++ NI LCPNPCVL+VS D ++ SF+G++SLPTL DISADSLC NK DRLG+IVSHMLRQ+SFYP+FPPS++VPLDT FL+RL+I DVDTG TVD+I+VPSKLKAFAKSVDGGAIAVNPG+A+ R + A I L L S
Sbjct: 4 SFRLGELQLPAAHAVIARNICAENALSAEQLYCKWEAWALANHKSTHLPAEQDLHALAAHIRSKSRSKPPVHRIPSPTSSRLLRPPAPTPTRID-IDDFFTYVDHPAQHPAQL---PERPLPKRTRMHPPSAPDAQRQQLSDPAPSNPNLMLDH-LPPLPGDHTPDSTYAQRHASGRVEAHFSNQHSTPHNPMARSDRGPLQIAPY-PRAKRTQFRYMNDTVAQRIAAVRHRLRTVGDRILQRVKQSRAHDMPPLSPSAFVEGSPTPVLLVGRIRTELDELDSKHGARINANSVLLESEDGHRIKLDLGRMLANKLPFFLAPGMIVLVEGVNTNGRLLHVHAIYDNAMPPAEQRH--QPKSESHQQPDAQHNMEPTPSAQHHSQPYARTIIAAGPFSCSTNLKYEPLTDLLHIVKREKPDMVILTGPFVEQSHPHISEKTPLSFEHLFVHRVFALLANTLSEMRQQHETTLPHFVIIPALEDVHHSFVCPQPPFHWPNDEPLDPNILLCPNPCVLKVSTSDARFSSFIGSSSLPTLLDISADSLCANKADRLGAIVSHMLRQKSFYPTFPPSSSVPLDTTFLERLDICDVDTGPTVDLIVVPSKLKAFAKSVDGGAIAVNPGMAATRHVETTRAAAIRLQLRTS 639
BLAST of Gchil5908.t1 vs. uniprot
Match: R7Q9W4_CHOCR (DNA polymerase alpha subunit B n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W4_CHOCR) HSP 1 Score: 405 bits (1042), Expect = 1.710e-132 Identity = 212/441 (48.07%), Postives = 292/441 (66.21%), Query Frame = 0
Query: 224 MHNPVLQRMNDVRSHTQTIVEQILSRLKLLR-DDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQT---SEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQV-EHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRRSIQANEDTIEVSVIRL 659
M++ V +++ VR+ + + ++IL+R++ LR +DE+P++S SP +L GRIR ELEE D IN SV+LE E+G+ +KLNL R+ K P F+N GMVVVVEGVNTNG+ VHA+YDNAM + Q+ + + QP+AN+I AAGPFT +NL YEPL DLL +++R +P V LTGPFV+ SH +S TP+ ++ +F +R++ L+ +A M +FVL+P+L DVHHDFVCPQPAFR Q + I L NP V+E++++DG V+ VG +LP+LQDISAD +C NKPDR +I SHM+RQ SFYP+FPPS +VPLD D + I D + TVD+++ PS+LKAFAKSVDGGA+AVNPGL R S GG+YAE+ +PLH + R + ANED ++ S+IRL
Sbjct: 1 MNDAVPAKIDAVRARVRHLGDRILARVRHLRNEDELPKISPESFFVRSPDVVLAVGRIRVELEETDGVGIGRINANSVVLESEEGNMVKLNLSRVHEKKQPMFLNSGMVVVVEGVNTNGRCIQVHAVYDNAMSLPPDARQKKDHRXXXXXXXXXXXXXXEQEQPFANIIFAAGPFTTSTNLNYEPLEDLLSVVERARPDAVFLTGPFVDASHADVSSATPVQFEHIFETRVLNRLRKAVAAMTDEGPRT-EFVLVPSLMDVHHDFVCPQPAFRLQAGQPSDARIRLVANPSVVELASRDGAAVATVGVANLPSLQDISADCICWNKPDRFAAIASHMVRQCSFYPTFPPSASVPLDCSLWDGMAIPDTERWPTVDVLVTPSRLKAFAKSVDGGAVAVNPGLLCRGSSGGSYAEMRIPLHEATSSRGLNANEDKLKASIIRL 440
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A7R9J435_TIMCA (DNA polymerase alpha subunit B n=2 Tax=Timema TaxID=61471 RepID=A0A7R9J435_TIMCA) HSP 1 Score: 177 bits (449), Expect = 5.990e-44 Identity = 136/472 (28.81%), Postives = 234/472 (49.58%), Query Frame = 0
Query: 176 QYANRTGSGRVEASL-DNSEATPHNPLSRDLLGPIHVQPFTPH-QPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEG----EDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQR--HVFQEKREVKMEEEDEVEQHSQPYA----NLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRN-KPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIAL 634
+YA RT SG+ S DNS H D + + H P+TRYM +++ + + IV+ I S L ++ + + R P +++ GR+ + N +N+ SV+LEG G + ++LH+L + + PG V+ E +N G+L +Y +A S +R ++ + +++ +HSQP +++VAAGP+T+ L YEPL DLLQ ++ NKPHV+IL GPFV+ +H HI + E F + I + T+ + Q V++P+ D HH + P PAF+ + ++ P+PC++++ VG TS+ L +I + + + K DRLG + SH+L Q+ FYP +PP ++ +D L++ G T ++I+PS L++F K ++G + VNP ++ GG++A + +
Sbjct: 194 KYAARTNSGKAMCSYGDNSTEWKH---LGDSYPSVELSSLVTHITPNTRYM----FEQLREKAAVLDDIVDWIGSYL--IKKHSLDGPFPLNRPHAEP--MVVVGRVCCD-------ANGHLNVNSVLLEGTRVMSGGMSVYMDLHQLPQ----YSLFPGQVIAAEVLNPTGRLLMAKQLYTDASLPSPERLPNISSQDAITMLKDSSSPSEHSQPGGRGPLHMLVAAGPYTQTDTLTYEPLEDLLQHVKTNKPHVLILIGPFVDSTHPHIVDGSFAETFESFFEKTIDGIMNTLKDVKC------QVVIVPSWRDAHHHMIYPTPAFQ--LTKHYPSVLCAPDPCMVDIQGL------IVGITSVDVLLNIGKEEISLSTKGDRLGRLASHVLAQQYFYPLYPPEESLNVDLELLEK----HTHLGVTPHVLILPSDLRSFIKDING-CVVVNPERLAKGVVGGSFARLVV 624
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A1Z5KI39_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI39_FISSO) HSP 1 Score: 171 bits (434), Expect = 5.800e-42 Identity = 152/509 (29.86%), Postives = 234/509 (45.97%), Query Frame = 0
Query: 175 EQYANRTGSGRVEASLDNSE--ATPHNPLSRDLLGPIHVQPFTPHQPHT-RYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPAT--ILIAGRIRTELEEIDASCNAT----INLESVILEG---EDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHI-SPQTPM----------PYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFR----------WPFAQ-----------VE-------HNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKP--DRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYA 630
++Y RTG+G++ ++ E + PLSR I F+ + HT R M QR + + + ++ + +L + D++ L + G P + GRI CNA IN S +LEG E G + L+ + + + PG +V +EG+N G+ V + + A R + + Q QP L+ AAGPFT N Y+PL DLL ++Q+ +P VVILTGPFV+ H + S QT + PY+ FV +I + L+ + L+ QFVL+P+LED ++V PQP F+ P A VE +H PNPC L+++ +G TS L +SAD N P RL I H+L+QRS+YP FPP+ + +D ++++ + D++I+PSKL F+++V I VNPG +R++ GGTYA
Sbjct: 135 DKYETRTGAGQIVSTFSAKEKRTATYVPLSRPKCA-IRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGV----GIPRADQVCNVGRI----------CNAAHAGKINATSCLLEGSRAEGGVRVSLDW----SGVSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTT------RRSALRQYHLQAQEGQPL-KLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEEL---LTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGADGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEV------VIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGMNMDYQYMEQWSMPCQP-----DVLILPSKLACFSRTVMDTTIVVNPGRLTRDTVGGTYA 603
BLAST of Gchil5908.t1 vs. uniprot
Match: UPI0009E1AEF1 (DNA polymerase alpha subunit B-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1AEF1) HSP 1 Score: 171 bits (432), Expect = 8.140e-42 Identity = 137/468 (29.27%), Postives = 229/468 (48.93%), Query Frame = 0
Query: 176 QYANRTGSGRVEASLDNSEATPHNPLSRDLLGPIHVQPFTPHQPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGED----GHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESH-QHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHN----IHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDI-SADSLCR-NKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEI 632
+Y++R SG + S + S + P + + + + + + + + Q+ D + +++ + +L+ E S++C + + + GRI + N +N +SV+LEG G IKL+L L F + PG VV +EGVN+ G+ V N + T Q V+ ED S+P+ + VAAGPFT +L YEPL+DL+Q +Q +KP+++IL GPFV+ H Q I+ P++++F ++ ++AT ++L V +P+ DVHHDFV PQP F E N IH +PC L V+ VG +S+ L + S +++C DR G ++ H+L Q S+YP PP+ V +D ++ ++ + D++I+PS L+ FAK G + +NPG ++ GGTYA++
Sbjct: 164 KYSSRNNSGEIVFSFNPSGSDPQHIIQQHIPATHLTVQYATQKDALLNSYKYMFQKQGDKATVLGELIDNMAEKLQASLGVE--EFSSLCIP--TQEEVFVIGRICCD-------SNGKLNSQSVVLEGSQELSSGQQIKLDLSEL----RQFALFPGQVVAIEGVNSTGQKLVV-----NKLCTGVQLPFHSPVENVEHGSEDIT---SEPFL-MSVAAGPFTTSDSLLYEPLADLMQKVQNDKPNLLILLGPFVDTKHDQIINGDLEEPFEDLFDRQVQQIVKAT-------EKLATTVVFVPSHRDVHHDFVYPQPPFSTKVNTAEFNAAERIHFVSDPCTLVVNNVS------VGLSSMDVLLHLASEETVCPPGSSDRFGRLLKHILHQHSYYPLHPPAEDVNIDYEQFEKYAMLPYNP----DILILPSDLRYFAKDTLG-CLCLNPGRLAKGHVGGTYAKV 589
BLAST of Gchil5908.t1 vs. uniprot
Match: Q6DCZ1_XENLA (DNA polymerase alpha subunit B n=7 Tax=Xenopus TaxID=8353 RepID=Q6DCZ1_XENLA) HSP 1 Score: 170 bits (431), Expect = 8.790e-42 Identity = 134/462 (29.00%), Postives = 215/462 (46.54%), Query Frame = 0
Query: 175 EQYANRTGSGRVEASLDNSEATPHNPLSRDLLGPIHVQPFTPHQPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRLK-LLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISP-QTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRW--PFAQVEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNK--PDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYA 630
++Y +RT G V + + T N S V+ FT M+ + Q++ D+R +E++ + LK + DE +S L A T L +I N +N +SVILEG+ H + + ++ + + PG VV++EG N+ G+ F +Y+ Q +E +E P +I A GPFT + Y+ L DL+ I+ R++P + IL GPF++ H+ I Q + +++VF + + ++ T + V++P+L DVHHD V PQP F P + + +H +PC L V+ +G TS L + A+ + + PDR I+ H+L QRS+YP +PP+ + +D L M V T D+ IVPS+L+ F K V G I +NPG ++ GGTYA
Sbjct: 159 QKYGSRTNRGEVVTTYGELQGTTWNGGSGSNTN---VELFTSLDEPLTKMYKFMFQKLMDIREVVSIKIEELGASLKDHFQIDEFTSVS------------LPAQETVTVLGQIGCDSNGKLNSKSVILEGDREHSAGMQVPVDLSELKDYSLFPGQVVIMEGTNSTGRRFVPTKLYEGVPLPFHQ----------PSKEFEEC-----PQQMVITACGPFTTSDTITYDALKDLIDIVNRDRPDICILLGPFLDAKHEQIENLQLTVTFEDVFKRCLKMIIEGTRPSGC-------HLVIVPSLRDVHHDPVYPQPPFSCFEPAKEDKERVHFVADPCTLSVNGV------VIGMTSTDLLFHMGAEEISSSAGAPDRFSRILRHILTQRSYYPLYPPNEEINIDYEALYSYTPMPV----TPDVFIVPSELRYFIKDVTG-CICINPGRLTKGLVGGTYA 572
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A7R9HXE8_9NEOP (DNA polymerase alpha subunit B n=5 Tax=Timema TaxID=61471 RepID=A0A7R9HXE8_9NEOP) HSP 1 Score: 170 bits (430), Expect = 1.200e-41 Identity = 139/472 (29.45%), Postives = 229/472 (48.52%), Query Frame = 0
Query: 176 QYANRTGSGRVEASL-DNSEATPHNPLSR--DLLGPIHVQPFTPH-QPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRL--KLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEG----EDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQR--HVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRN-KPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIAL 634
+YA RT SG+ S DNS N R D + + H P+TRYM +++ + + IV+ I S L K D+ P + R P +L+ GR+ + N +N+ SV+LEG G + ++LH+L + + PG V+ E +N G+ +Y + S +R H+ + + +++VAAGP+T+ L YEPL DLLQ ++ NKPHV+IL GPFV+ +H HI + E F +II + T+ + Q V++P+ D HH + P PAF+ + N+ P+PCV+++ VG TS+ L +I + + + K DRLG + SH+L Q+ FYP +PP ++ +D L++ G T ++I+PS L++F K ++G + VNP +++ GG++A + +
Sbjct: 167 KYAARTNSGKAMCSYGDNS-----NEWKRLGDSYPSVELSSLVTHITPNTRYM----FEQLREKAAILDDIVDWIGSHLIKKHSLDEPFP----LNRPHAEP--MLVVGRVCCD-------ANGHLNVNSVLLEGTRVMSGGMSVYMDLHQLPQ----YALFPGQVIAAEVLNPTGQRLMAKKLYTDVSLPSPERLPHISSQDGPL----------------HVLVAAGPYTQTDTLTYEPLEDLLQHVKVNKPHVLILIGPFVDSTHPHIVDGSFAETFESFFEKIIDGIMNTLKDVKC------QVVIVPSWRDAHHHMIYPTPAFQ--LTKHYPNVLCAPDPCVVDIQGL------IVGITSVDVLLNIGKEEISLSTKGDRLGRLASHVLAQQYFYPLYPPEESLNVDLELLEK----HTHLGVTPHVLILPSDLRSFIKDING-CVVVNPERSAKGVVGGSFARLVV 577
BLAST of Gchil5908.t1 vs. uniprot
Match: A7S4W9_NEMVE (DNA polymerase alpha subunit B n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7S4W9_NEMVE) HSP 1 Score: 170 bits (430), Expect = 1.350e-41 Identity = 132/433 (30.48%), Postives = 212/433 (48.96%), Query Frame = 0
Query: 228 VLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNAT--INLESVILEGED----GHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYAN------LIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEH-NIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDI-SADSLCR-NKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRRSI 645
+ Q+ D + +++++ +LK+ E +T QG + + GRI C+A +N SV+LEG G +KL+L ++ F + PG VV G+N+ G V+ +Y+ VK+ ++++ + +N ++VAAGP+T +L YEPL+DL++++Q+NKP ++IL GPFV+ H+ I + DE F S + Q + T A ++ V P+ DVHHDFV PQP FR ++H NIH +PC L V +G TS L ++ S ++ C DRLG +V H+L Q SFYP PP+ V +D L + D++++PS L+ F K++ G ++ VNPG ++ GGTYA I + +S S+
Sbjct: 211 MFQKQVDKENVLNEMIDEMAEKLKIQHGIEEYAHTTSPSQG----EVTVVGRI---------CCDAVGKLNASSVMLEGSQDQSQGRQVKLDLTKV----QQFALFPGQVVAARGINSTGSKLVVNQLYEG----------------VKLPFYASLDRNGENLSNSKDPFVVVVAAGPYTTSDSLMYEPLADLIRMVQKNKPDLLILLGPFVDSKHEKIE---NVDLDETFES--LFKRQVDLITQA-TERQGTTVVFAPSQRDVHHDFVFPQPPFRKDTHAMDHKNIHFVSDPCTLLVGNVT------IGLTSTDVLLNLGSEETACPPGSSDRLGRLVKHILHQHSFYPLNPPNEEVNVDYERLSHHGTLPCSP----DLLVLPSDLRYFTKNILG-SLCVNPGRLAKGQVGGTYARILIQPDSSHTDASV 593
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A7L2Z5P1_JACJC (DNA polymerase alpha subunit B (Fragment) n=1 Tax=Jacana jacana TaxID=54508 RepID=A0A7L2Z5P1_JACJC) HSP 1 Score: 164 bits (416), Expect = 1.840e-41 Identity = 117/377 (31.03%), Postives = 188/377 (49.87%), Query Frame = 0
Query: 272 ATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISP-QTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHN--IHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNK--PDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRR 643
+ +L A T L +I N +N +SV+LEG+ H + ++ + + PG +V +EG N++G++ V +Y+ + V E+R V +VA GP+T ++ YEPLSDLL +I R++P V +L GPFV+ H+ + Q + EVF + ++ T A S Q VL+P+L DVHH+FV PQP F P + +HL P PC L++ DG +G TS + + ++ + + DR I+ H+L QRS+YP +PPS + +D L + V T D+++ PS+L+ F K V G + +NPG ++ GGTY + L +++ R
Sbjct: 24 SVLLPAQEAVTVLGQIGCDSNGKLNPKSVVLEGDREHSSGGQIPLDLSELQEYSLFPGQIVALEGTNSSGRMMVVSKLYEVRVFPPPHLMVPAEQRMV------------------LVACGPYTTSDSVAYEPLSDLLGVIARDRPDVCVLFGPFVDAKHEQVENCQLLGAFTEVFKLCLKTIIEGT--RSAGS-----QLVLVPSLRDVHHEFVYPQPPFPCPDLPRDDRLRVHLVPEPCTLDI---DGV---ILGLTSTDLIFHMGSEEISSSSGVSDRFTRILRHILTQRSYYPLYPPSEELNVDYEHLYSHASLPV----TPDVLVTPSELRYFLKDVLG-CVCINPGRLTKGQVGGTYGRLYLQREDTQGER 364
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A8B8DY70_CRAVI (DNA polymerase alpha subunit B n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DY70_CRAVI) HSP 1 Score: 169 bits (429), Expect = 2.110e-41 Identity = 120/369 (32.52%), Postives = 195/369 (52.85%), Query Frame = 0
Query: 295 INLESVILEGED----GHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHI-SPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEH----------NIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKP---DRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRRSI 645
+N +SVILEG G FI L+L L + + PG +V +EG+NT+G+ F V +Y+ +Q+ K E+ D P ++++AAGPF+ NL +EPLSDL++ I+++KP VVIL GPFV+ + I + + +DE+F +++ + I+ +A+S Q +++P+ DVHHD+V PQP F F Q ++ N+H P+PCV++++ V F G TS + + A+ + N P DR+ + H+L Q++FYP +P V +D + M T +++VPS LK F K + G +NPG +R GGT++ + L + R+SI
Sbjct: 279 MNAKSVILEGSRDTSAGRFIPLDLSDLKQ----YSLFPGQIVAMEGINTSGQKFVVKKLYEGVVQSLPSS---------KSEKADS------PDMSVLIAAGPFSTSDNLSFEPLSDLVKYIRKDKPDVVILMGPFVDMKNDLIENGKCTSSFDEIFKTKL-----SEISDVASSSG--SQVIVLPSYRDVHHDYVYPQPPF---FHQSQNSQSKAKSDYPNLHFMPDPCVVDINN-----VIF-GLTSSDVMFQLGAEEISYNPPGASDRMARLAEHLLTQQNFYPLYPSPEDVNIDYEEFELYARMPC----TPHVLVVPSDLKQFTKDIQG-CCCINPGRLARGQAGGTFSRLKLRAGVIQSRQSI 607 The following BLAST results are available for this feature:
BLAST of Gchil5908.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil5908.t1 ID=Gchil5908.t1|Name=Gchil5908.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=660bpback to top |