Gchil581.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil581.t1
Unique NameGchil581.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length494
Homology
BLAST of Gchil581.t1 vs. uniprot
Match: A0A2V3IZN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZN0_9FLOR)

HSP 1 Score: 384 bits (987), Expect = 1.120e-125
Identity = 227/486 (46.71%), Postives = 315/486 (64.81%), Query Frame = 0
Query:    1 MSAAPRFSAPSTESLPATFFDDARCADTGADRRTHEQRCLLARCLLLASQHRWVAEWLFSDPHTRFHRNLHVALSAFDHAHPLSIMHSFQGQNSTRNLASEMLLIPMANMNAITVGYITLRGGSNWHGHVGRYAFHSQSAEVLMVVNNYTPDATAVMAVIPQPDTVKQFLITCPVLEYSFNNLPNQAFTVHVAERDQTS------KNSPQQIAHQLQAFPASIDRLLELCSTNDSMLPSSSYHSDLLSLLDLDPPSQLPWIIDSASSLSDNIGIPANPGTADTSSGAFNLTAISDSIRHIENTLHGTFLGTSEIHYPLALAFESPVKQTIVSIAAADSLEATLLRRYAVKVYFDATTPVISDEKYL--ALPSFPYSVTAEPSPSQPQNSTGNDKQYFRRIAPSPMTVASDNPTVAKAD--ADLARERTLEARRRRNRLSAARSNDKRKEKWKRKVQTLQELRERMKNLLSKQQQLVEENGMLRKLV 476
            MSAAP  + PS+ +LP++FF +A+  D   D R H  RC+L+R L LASQHRWVAEWLFSDP  +FH N+ + LS FD  + +S+MH FQ    +R+LAS +LL+P+A++ ++TVGY T+  G     + GRYAF S+  EV++V+++YTP ATA+MA+ P  D   Q+L+ CP   YSFNNLPNQA +V V +R   S       + P Q  H LQ+ P S++ LL++    D+   SS   +DLL   ++D PSQLPWIID +S  +DN+GIPA PG ADTSSGAFN  A+S+SI  IE  + G F  +   H      FE P ++T+V I+ A + +A LLRR AV  YF AT PV++DE+YL   LPS P ++   P   QP    G+       IAP P+ V++ +    +++  A  ARER LEARRRRNR+SAARSN++RK+ W R +QTL  L++R+  L +++ QLVEEN +LR ++
Sbjct:    1 MSAAPVSTRPSS-ALPSSFFAEAQLTDPVEDLRAHTNRCVLSRTLQLASQHRWVAEWLFSDPDAKFHGNIALPLSTFDKGYAVSVMHIFQHATHSRHLASNLLLLPVASIGSVTVGY-TVSQGRTGQLNTGRYAFDSRVDEVVLVLHSYTPQATALMAIAPGSDDAYQYLVLCPNGHYSFNNLPNQAISVQVGKRQGNSFSASLLNSQPHQPNH-LQSLPDSVEELLKIPVPFDTER-SSGEETDLLLAAEIDLPSQLPWIIDESSRPADNVGIPATPGNADTSSGAFNFDALSESIHDIERAICGRFSTSESAHMSFTKDFELP-QRTVVDISTASAFDANLLRRRAVTEYFAATAPVVTDERYLPFVLPSNPQALLPMPQEDQPM---GHSATRPTTIAPKPLPVSNTDRQTMQSNTAAQQARERMLEARRRRNRMSAARSNERRKQNWNRSMQTLNSLKKRVHELETRRAQLVEENDVLRHII 478          
BLAST of Gchil581.t1 vs. uniprot
Match: R7Q702_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q702_CHOCR)

HSP 1 Score: 105 bits (262), Expect = 1.770e-20
Identity = 94/302 (31.13%), Postives = 144/302 (47.68%), Query Frame = 0
Query:  214 PASIDRLLELCSTNDSMLPSS----SYHSDLLSLLDLDPPSQLPWIIDSASSLSDNIGIPANPGTADTSSGAFNLTAISDSIRHIENTLHGTFLGTS---EIHYPLALAFESPVKQTI-VSIAAADSLEATLLRRYAVKVYFDATTPVISDEKYL--ALPSFPY------SVTAEPSPSQPQNSTGNDKQYFRR----IAPSPMT-------------------VASDNPTVAKADADLARERTLEARRRRNRLSAARSNDKRKEKWKRKVQTLQELRERMKNLLSKQQQLVEENGMLRKLV 476
            P  +D+L      N S   S+    S+H+ L       P S+L WI+ SA S  D +G+P  PG  DTSSG+FN+ ++ DS+  IE +L G+F G     ++ +PL     S     +  SI   D+     LR+ A + Y+ +   V  D + L  +L S P+      S        +P+   G  +   R     +AP P+                    +AS     A  D   ARE  LEA+R +NRLSAARSN KR+ + + + Q L ELRER++ L  ++ ++ EEN +L++ +
Sbjct:  299 PDVLDQLALSSPVNSSSTTSNGTDFSFHTAL-------PASELSWILSSAGSTPDGVGVPRVPGANDTSSGSFNMNSLVDSLATIEKSLKGSFYGPKVRKDVLHPLTGELVSRCTGKVRASIDNVDASSLFHLRKIAAQTYYSSVLSVAPDARLLPLSLASRPFISAPTTSTNLRQPTDEPRRKQGRTEPQHRPAPAPLAPRPVVTISLPPGLPHPEVLQLPEPIASTTIPPAPTDEKSAREAKLEAKRIKNRLSAARSNQKRRAQLEAQKQELAELRERVQELKWRETKVSEENEILKRQI 593          
BLAST of Gchil581.t1 vs. uniprot
Match: A0A2V3IZL6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZL6_9FLOR)

HSP 1 Score: 103 bits (258), Expect = 6.470e-20
Identity = 93/303 (30.69%), Postives = 140/303 (46.20%), Query Frame = 0
Query:  201 NSPQQIAHQLQAFPASIDRLLELCSTNDSMLPSSS------YHSDLLSLLDLDPPSQLPWII-DSASSLSDNIGIPANPGTADTSSGAFNLTAISDSIRHIENTLHGTFLGTSE----IHYPLALAFESPVKQTIVSIAAADSLEATLLRRYAVKVYFDATTPVISDEKYLALPSF----PYSVTAEPSPSQPQNSTGNDKQYFRRIAPSPMT------------VASDNPTVAKADADLARERTLEARRRRNRLSAARSNDKRKEKWKRKVQTLQELRERMKNLLSKQQQLVEENGMLRKLV 476
            +SP+        FP S D L    S  +S L SSS        S  + L+         WI+ D      D +G+P  PG  DTSSGAF+++++ DS+R IE +L G F         +H            Q +  +   DS    L R  A + Y+ +   +  D   L L       P      P P  P++     K   +R+AP+P+              A D+ TV K++ + AR+  LE +R +NR+SAARSN KR+ + + + + L  LR+R++ L SK+Q ++EEN  LRK V
Sbjct:  352 SSPETFGDDNSPFPLS-DDLQHSTSPAESSLTSSSGSTQPELASKAMQLVPEMDSVNNSWILTDENGRTPDGVGVPRRPGGNDTSSGAFDMSSLFDSLRSIERSLKGHFFSPKVRKDIMHPQTGELISRSTGQLMAKLDTIDSRSLQLFREVAAQSYYSSVMSMSRDNLLLPLQPLISPTPMIQAVTPIPQPPRSV--RQKTIQKRVAPAPLAPRPVSIAAXXXXXAPDDETVKKSEEEAARQAKLEVKRIKNRMSAARSNQKRRAQLEAQRKELAALRKRVEELTSKKQVMMEENMNLRKQV 651          
The following BLAST results are available for this feature:
BLAST of Gchil581.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IZN0_9FLOR1.120e-12546.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q702_CHOCR1.770e-2031.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZL6_9FLOR6.470e-2030.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 438..468
NoneNo IPR availablePANTHERPTHR13044ACTIVATING TRANSCRIPTION FACTOR ATF 4/5coord: 179..476
NoneNo IPR availableCDDcd14686bZIPcoord: 420..476
e-value: 8.73301E-10
score: 52.1625

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004380_piloncontigtig00004380_pilon:383736..385217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil581.t1Gchil581.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004380_pilon 383736..385217 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil581.t1 ID=Gchil581.t1|Name=Gchil581.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=494bp
MSAAPRFSAPSTESLPATFFDDARCADTGADRRTHEQRCLLARCLLLASQ
HRWVAEWLFSDPHTRFHRNLHVALSAFDHAHPLSIMHSFQGQNSTRNLAS
EMLLIPMANMNAITVGYITLRGGSNWHGHVGRYAFHSQSAEVLMVVNNYT
PDATAVMAVIPQPDTVKQFLITCPVLEYSFNNLPNQAFTVHVAERDQTSK
NSPQQIAHQLQAFPASIDRLLELCSTNDSMLPSSSYHSDLLSLLDLDPPS
QLPWIIDSASSLSDNIGIPANPGTADTSSGAFNLTAISDSIRHIENTLHG
TFLGTSEIHYPLALAFESPVKQTIVSIAAADSLEATLLRRYAVKVYFDAT
TPVISDEKYLALPSFPYSVTAEPSPSQPQNSTGNDKQYFRRIAPSPMTVA
SDNPTVAKADADLARERTLEARRRRNRLSAARSNDKRKEKWKRKVQTLQE
LRERMKNLLSKQQQLVEENGMLRKLVGYDVAGGRGCSQAQNAM*
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