Gchil5727.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5727.t1
Unique Name	Gchil5727.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	316

Homology

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BLAST of Gchil5727.t1 vs. uniprot
Match: A0A2V3IIE9_9FLOR (Muscle M-line assembly protein unc-89 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIE9_9FLOR)

HSP 1 Score: 118 bits (296), Expect = 1.950e-26
Identity = 137/237 (57.81%), Postives = 153/237 (64.56%), Query Frame = 0

Query:   92 RRGKGRETLIINKYGERVLVYRPDHDTDDSRRRPAARRPPRDSSDEFE-TAAKLNIPEEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPFNSSSRXXXXXXX--PDWSDDHRSSKRRRHAHYDSVQWER--------ASDSPKHDEPPVKSRAEEGDPPPRRPRXXGGRSRXXARANANQQ--ASAADKADGPSDRRNSRRQRSTRR 315
            RR  GRETL+INKYGERVLV+RPD+D ++ RR+  +RR  R+SSDE++ + AKLNIPEEVKXXXXXXXXXXX                        XXXXXXXXXXXXXXXXXXXXX        XXXXXXX  P+WSDD R+SKRR                     S SPKHD+ P KSR  E D PPRR R  GGRSR  A +NANQQ  ASAADK+D  SDRRNSRRQRS RR
Sbjct:  248 RRAAGRETLLINKYGERVLVFRPDNDNEEVRRKSTSRRTTRESSDEYDDSTAKLNIPEEVKXXXXXXXXXXXHSRHARSPDRSVSPPRFSPERDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEWSDDRRASKRRXXXXXXXXXXXXXXXXXXXATSVSPKHDDMPSKSRPGEDDEPPRRARKRGGRSRRRAHSNANQQNCASAADKSDIQSDRRNSRRQRSGRR 484

The following BLAST results are available for this feature:

BLAST of Gchil5727.t1 vs. uniprot

BLAST of Gchil5727.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IIE9_9FLOR	1.950e-26	57.81	Muscle M-line assembly protein unc-89 n=1 Tax=Grac...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..231

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000015_pilon	contig	tig00000015_pilon:1127216..1128901 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5727.t1	Gchil5727.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000015_pilon 1127216..1128901 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5727.t1 ID=Gchil5727.t1|Name=Gchil5727.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=316bp
MAAVALSNLPWWTSDADVEALVARAHAAARRAVVDVRFAVDAACGKSLGR
VVVALSAPELAEPLRAALAEQAPPSAAPSTPVAPDPDRSRSRRGKGRETL
IINKYGERVLVYRPDHDTDDSRRRPAARRPPRDSSDEFETAAKLNIPEEV
KERLRERMHNERHTQHNRSPERSLSPRRASPERDRQRDRDRTRDRNRDRR
RERTRDRSPFNSSSRRRSRSHSPDWSDDHRSSKRRRHAHYDSVQWERASD
SPKHDEPPVKSRAEEGDPPPRRPRRRGGRSRRRARANANQQASAADKADG
PSDRRNSRRQRSTRR*