Gchil5726.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5726.t1
Unique NameGchil5726.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length243
Homology
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A2V3IFP7_9FLOR (Eukaryotic translation initiation factor 3 subunit J n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFP7_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 6.660e-83
Identity = 135/218 (61.93%), Postives = 166/218 (76.15%), Query Frame = 0
Query:    1 MSNWDDDE-WDVDPSPAAPTIPSASAYYGGDALGNWDDEDQSEDEEPQLKKPSAPMKPSKARAKXXXXXXXXXXXREIEKVLARQXXXXXXXXXXRKIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTNK 217
            M++WDDD+ WD  P PA PT  ++S     +ALGNWDDEDQS+DE+ +LKK  APMKPSK RAK           RE+++VLARQ          RKIR+QQIVEEAD ENAKELFMV   S+ M PP+ PT+++FKP +DADFSKFA+M+G+RC+ LNDNPKR+ R+M F+KEMLRV VK LGPDDTK LSTFVGV+SNEKRDEFK+++G KKK+NK
Sbjct:    1 MASWDDDDDWDAHPPPA-PTFHASS-----NALGNWDDEDQSDDEQIELKKAPAPMKPSKLRAKALKEKEDQQRQREVQRVLARQKELDEMDAVQRKIRQQQIVEEADLENAKELFMVAAPSDAMAPPSQPTLDDFKPQSDADFSKFARMMGDRCAALNDNPKRSARFMHFIKEMLRVAVKDLGPDDTKQLSTFVGVLSNEKRDEFKRAKGIKKKSNK 212          
BLAST of Gchil5726.t1 vs. uniprot
Match: R7Q2T7_CHOCR (Translation initiation factor eIF3, subunit J n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2T7_CHOCR)

HSP 1 Score: 202 bits (515), Expect = 9.680e-62
Identity = 118/235 (50.21%), Postives = 164/235 (69.79%), Query Frame = 0
Query:    1 MSNWDDDEWDVDPSPA-APTIPSASAYYGGDALGNWDDEDQSEDEEPQLKKPSAPMKPSKARAKXXXXXXXXXXXREIEKVLARQXXXXXXXXXXRKIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLND-----NPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTNKKSHVRVDKMNDM 229
            MSNWDD++W+ D  P+ AP++P  +A   G        E   E+E+  LKKPSAPMKPSKARA   XXXXXXX      + +AR+          RK+R+Q++VE+AD EN K+LFM G ++ GM PPA+PTI+ FKPVT+ D++K+A MI E C  L++       K+ G Y+ FVK+++R + + L  +DTKDLSTF+G++SNEKRD+FKKS+G+KKKT+KK+HVRVD+ +DM
Sbjct:    1 MSNWDDEDWEADSGPSPAPSLPVPAAGGMGXXXXXXLPE---EEEDISLKKPSAPMKPSKARALALXXXXXXXQRLATARAIAREKEMEELSAVERKMRQQKLVEQADLENVKDLFMEGSSNGGMRPPAEPTIDTFKPVTEEDYNKYAAMISEHCVKLSNINSPTKKKQMGLYVSFVKQLMRGLAQELSQEDTKDLSTFMGLLSNEKRDQFKKSKGYKKKTSKKTHVRVDREDDM 232          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A5J4Z7B4_PORPP (Eukaryotic translation initiation factor 3 subunit J n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7B4_PORPP)

HSP 1 Score: 89.4 bits (220), Expect = 2.310e-17
Identity = 56/136 (41.18%), Postives = 84/136 (61.76%), Query Frame = 0
Query:   95 RKIREQQIVEEADFENAKELFM--VGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTNKKSHVRVDKMND 228
            R+ R Q++VE+AD ENAK+LFM    D  E  +P  +PT++N    T  D  KF +++ E+ S L  +P+R  RYM+ +K +LR     L  DD KDL++   V++NEK      ++G KKKT KK+H+ VD+ +D
Sbjct:  162 RRARMQEMVEKADLENAKDLFMDAAPDDDEDADPD-EPTLDNIALKTSKDDEKFVKLLVEKISPLY-HPRRPERYMNVLKSILREGTGELDADDVKDLASTCNVLANEKLKAKSAAQGKKKKTAKKTHIMVDRDDD 295          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A7J6ESJ1_CANSA (Eukaryotic translation initiation factor 3 subunit J n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6ESJ1_CANSA)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-14
Identity = 66/234 (28.21%), Postives = 115/234 (49.15%), Query Frame = 0
Query:    1 MSNWDDDEWDVDPSPAAPTIPSASAYYGGDALGN-----WDDEDQSEDEEPQLKKPSAPMKPSKARAKXXXXXXXXXXXREIEKVLARQXXXXXXXXXXRKIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTN-KKSHVRVDKMND 228
            M +W+D+       P   T P +S +   D   N     W+D+D+S+      + P A   P K+  K              +KV A +           K+R+Q++VEEAD+++ KELF    A +G     D T++NF P +++DF ++A++I  +        +++  Y++ +K ++R+    L   D KD+++ +  I+NEK    K++   KKKT  KK  + VDK +D
Sbjct:    1 MEDWEDEHI----PPVITTEPLSSKWADEDVDENDVKDSWEDDDESQPATEXARNPPADKAPKKSSVKAAD-----------KKVKAVESKEEPLDPVAEKLRQQRLVEEADYKSTKELF----AKKGE----DKTLDNFIPKSESDFQEYAELISHKLLPF----EKSFHYINLLKAVMRLATTSLKAADAKDVASSITAIANEKLKLEKEANAGKKKTGAKKKQLLVDKPDD 207          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A7S0G7Z8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G7Z8_9RHOD)

HSP 1 Score: 80.5 bits (197), Expect = 1.100e-14
Identity = 45/131 (34.35%), Postives = 80/131 (61.07%), Query Frame = 0
Query:   95 RKIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTNKKSHVRVDK 225
            +K+  Q++VEEADF+NAK++FM GD+S+        T++   P    +  K+ +++  + +++ D+  R+ R + F K++LR +   L  DDTK+LS+ + VISNEK    K  +  K K  KK+ V++++
Sbjct:   82 KKLARQKLVEEADFQNAKDMFMHGDSSDVKAETGKETLDGMSPKGSKELKKYCELLVPKLNMVMDSNVRSHR-LQFFKDVLRGITADLSVDDTKELSSHLNVISNEKIQVNKGPQAKKGKAKKKTTVKMER 211          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A7N2KP52_QUELO (Eukaryotic translation initiation factor 3 subunit J n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2KP52_QUELO)

HSP 1 Score: 75.5 bits (184), Expect = 6.950e-13
Identity = 61/229 (26.64%), Postives = 114/229 (49.78%), Query Frame = 0
Query:    7 DEWDVDPSPAAPTIPSASAYYGGDALGNWDDEDQSEDEE-----PQLKKP--SAPMKPSKARAKXXXXXXXXXXXREIEKVLARQXXXXXXXXXXRKIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTNKKSHVRVDKMND 228
            ++W+ +  P  PT   +   +  + + N D ++  EDE+     P+ K P   AP KP+   A+             ++ V               K+R+Q++VEEAD+++ KELF  G+  +      + T++NF P +D DF ++A+++ ++        +++  Y+  +K+++R+ +  L   D KD+++ V  I+NEK    K++   KKK  +K    VDK ND
Sbjct:    2 EDWEDEQIPPIPTKEQSKINWDDEDVDNDDVKESWEDEDEHTTAPETKPPVERAPKKPAVEAAEKKGKTVEVVKEEPLDPVAE-------------KLRQQRLVEEADYKSTKELF--GERGD------EKTLDNFIPKSDTDFLEYAELVSQKLRPF----EKSYHYIALLKDVMRLSMTTLKAADAKDVASSVTAIANEKLKAEKEANAGKKKAPRKKPFLVDKPND 205          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A443NKU2_9MAGN (Eukaryotic translation initiation factor 3 subunit J n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NKU2_9MAGN)

HSP 1 Score: 72.4 bits (176), Expect = 1.080e-11
Identity = 65/244 (26.64%), Postives = 113/244 (46.31%), Query Frame = 0
Query:    1 MSNWDDDEWDVDPSPAAPTIPSASAYYGGDALGNWDDEDQSE--------DEE--------PQLKKPSAPMKPSKARAKXXXXXXXXXXXREIEKVLARQXXXXXXXXXXRKIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTNKKSHVRVDKMND 228
            M +W+ ++++    P   TIP+          G WDDED  E        DEE        P   KP  P K +  +                 +VLA             K+R+Q++VEEAD+ +  ELF    A +G E     +++NF P +++DFS++A++I  +        +++  Y+  +K ++R+ +  +   D K++++ +  I+NEK    K++   KKK  KK  + VDK +D
Sbjct:    1 MEDWESEDFE----PVVHTIPTEKPK------GLWDDEDAEEEDVKESWEDEEDASTKAPKPVAPKPEPPAKKTVPKTSAKAGGKKEKVSEAANEVLA--------DPVAEKLRQQRLVEEADYRSTTELF----AKKGDEK----SLDNFIPKSESDFSEYAELISHKLLPY----EKSFHYIGLLKAVMRLSMTSMKAADAKEVASSITAIANEKLKAEKEANAGKKKQTKKKQLHVDKPDD 214          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A1S3XWX6_TOBAC (eukaryotic translation initiation factor 3 subunit J-like isoform X2 n=2 Tax=Nicotiana TaxID=4085 RepID=A0A1S3XWX6_TOBAC)

HSP 1 Score: 71.2 bits (173), Expect = 1.400e-11
Identity = 45/134 (33.58%), Postives = 82/134 (61.19%), Query Frame = 0
Query:   96 KIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTN-KKSHVRVDKMND 228
            K+R+Q++VEEAD+ +  ELF    A +G +   D T+++F P +++DFS++A++I  +        +++  Y+  +K+++R+ +  L   D  ++S  V  ISNEK  E K++   KKKT  KK  ++VD+ +D
Sbjct:   50 KLRQQRLVEEADYRSTAELF----AKKGGD---DKTLDSFIPKSESDFSEYAELISHKLRPY----EKSYHYIGLLKDVMRLSMTALNGQDANEVSKSVNAISNEKIKEEKEANTSKKKTGAKKKQLQVDRADD 172          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A1R3G6A0_COCAP (Eukaryotic translation initiation factor 3 subunit J n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3G6A0_COCAP)

HSP 1 Score: 71.6 bits (174), Expect = 1.850e-11
Identity = 66/230 (28.70%), Postives = 114/230 (49.57%), Query Frame = 0
Query:    2 SNWDDDEWDVDPSPAAPTIPSASAYYGGDALGNWDDEDQSEDEEPQLKKP---SAPMKPSKARAKXXXXXXXXXXXREIEKVLARQXXXXXXXXXXRKIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTNKKSHVRVDKMND 228
            S WDD+  DVD +               D   +W+DED+ E  +P ++KP    AP KPS    +             ++ V               K+R+Q++VEEAD+++  ELF    A +G +   D T++NF P +++DF+++A++I  +        +++  Y   +K ++R+ +  L   D KD+++ V  I+NEK  + +K    KKK NKK  + V+K +D
Sbjct:   19 SKWDDE--DVDDN---------------DVKESWEDEDEPEPPKP-VEKPVQEKAPKKPSSKATEKKGKSVEVAKEEPLDPV-------------SEKLRQQRLVEEADYKSTTELF----AKKGGD---DKTLDNFIPKSESDFAEYAELIAYKLRPY----EKSYHYNGLLKTVMRLAMTTLKAADAKDIASSVTAIANEKL-KAEKEATTKKKGNKKKQLHVEKADD 205          
BLAST of Gchil5726.t1 vs. uniprot
Match: A0A2P5BVJ4_PARAD (Eukaryotic translation initiation factor 3 subunit J n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5BVJ4_PARAD)

HSP 1 Score: 72.0 bits (175), Expect = 2.150e-11
Identity = 44/134 (32.84%), Postives = 83/134 (61.94%), Query Frame = 0
Query:   96 KIREQQIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMIGERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNEKRDEFKKSRGFKKKTN-KKSHVRVDKMND 228
            K+R+Q++VEEAD+++ KELF    +++G +   D T++NF P +++DF ++A++I  R        +++  Y+  +K ++R+ +  L   D KD+++ +  I+NEK    K++   KKKT  +K  + VDK +D
Sbjct:   86 KLRQQRLVEEADYKSTKELF----STKGSD---DKTLDNFIPKSESDFQEYAELISHRLLPF----EKSFHYIGLLKAVMRLSMNSLKAADAKDVASSIAAIANEKLKLEKEANAGKKKTGARKKQLHVDKPDD 208          
The following BLAST results are available for this feature:
BLAST of Gchil5726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFP7_9FLOR6.660e-8361.93Eukaryotic translation initiation factor 3 subunit... [more]
R7Q2T7_CHOCR9.680e-6250.21Translation initiation factor eIF3, subunit J n=1 ... [more]
A0A5J4Z7B4_PORPP2.310e-1741.18Eukaryotic translation initiation factor 3 subunit... [more]
A0A7J6ESJ1_CANSA1.020e-1428.21Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S0G7Z8_9RHOD1.100e-1434.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7N2KP52_QUELO6.950e-1326.64Eukaryotic translation initiation factor 3 subunit... [more]
A0A443NKU2_9MAGN1.080e-1126.64Eukaryotic translation initiation factor 3 subunit... [more]
A0A1S3XWX6_TOBAC1.400e-1133.58eukaryotic translation initiation factor 3 subunit... [more]
A0A1R3G6A0_COCAP1.850e-1128.70Eukaryotic translation initiation factor 3 subunit... [more]
A0A2P5BVJ4_PARAD2.150e-1132.84Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..77
NoneNo IPR availablePANTHERPTHR21681:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..242
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 1..242
e-value: 7.1E-36
score: 124.4
IPR013906Eukaryotic translation initiation factor 3 subunit JPANTHERPTHR21681EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..242
IPR023194Eukaryotic translation initiation factor 3-like domain superfamilyGENE3D1.10.246.60Eukaryotic translation initiation factor 3 like domainscoord: 130..210
e-value: 1.8E-17
score: 65.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1126141..1126869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5726.t1Gchil5726.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1126141..1126869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5726.t1 ID=Gchil5726.t1|Name=Gchil5726.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=243bp
MSNWDDDEWDVDPSPAAPTIPSASAYYGGDALGNWDDEDQSEDEEPQLKK
PSAPMKPSKARAKALKEKEEQERQREIEKVLARQKELDEMDAVQRKIREQ
QIVEEADFENAKELFMVGDASEGMEPPADPTIENFKPVTDADFSKFAQMI
GERCSVLNDNPKRTGRYMDFVKEMLRVVVKGLGPDDTKDLSTFVGVISNE
KRDEFKKSRGFKKKTNKKSHVRVDKMNDMRNDVYDDFADDFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013906eIF3j
IPR023194eIF3-like_dom_sf