Gchil569.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil569.t1
Unique Name	Gchil569.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	352

Homology

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BLAST of Gchil569.t1 vs. uniprot
Match: A0A2V3J0U5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0U5_9FLOR)

HSP 1 Score: 395 bits (1014), Expect = 5.980e-134
Identity = 182/288 (63.19%), Postives = 231/288 (80.21%), Query Frame = 0

Query:   63 PAREIFLQPSAVKIEGIGAVLSGLKPVLLLSQYTNARITMHDNFTGHGYNMSQYLQFGTPFPPWQRVPCNITFNMRKLLVRIVEQCEHFNLSELHQLRLFDKCNSISISKYIAHPRVCLKHTQNLVRSFTKFRNIDDTPKNHVCVLRRGGDIEHIILAGEGNKYAIDEQLTLPILHNVSRRGGKVALITETEHEQQLKALYKPHVFSNFDSLERVVSLLGRCRCTFVSSGSSFAAAMMQITRPSYIVYTSSREGFSFEERWYSFEEYGPSAIDVNSAPQHVVDKCAPR 350
            P REIFL PSAV+IEGIGAVLSGLKP+L+L+ YTNA+ITMHDNFTGHGYNM++YL+   PF P QR+PC +  N+RK LV +VE C +F    L  LRLF++CNSIS++KYIAHPR+C+KHTQ+L R FTKF+   +  K+++CVLRRGGDIE II +G+GN +AIDEQLT+PIL   + RG ++ L TET +EQ++  LY+PH+FSN +SL  VVSLL  CRC FVSSGS+FAAAMMQ+ RP+Y+VYTSSR GFSF+ +WY F+EYG  AIDV S   +VV++CAP+
Sbjct:   72 PQREIFLTPSAVRIEGIGAVLSGLKPILMLANYTNAKITMHDNFTGHGYNMTEYLRLEKPFEPHQRIPCKLNLNLRKFLVNVVEHCHNFRPEHLKPLRLFERCNSISVNKYIAHPRMCVKHTQDLARDFTKFQLRSNVRKDNLCVLRRGGDIEDIIRSGQGNMHAIDEQLTIPILRKAAGRGRRIVLATETRYEQEVSDLYRPHIFSNNESLPVVVSLLETCRCLFVSSGSAFAAAMMQLARPTYLVYTSSRPGFSFDAQWYHFDEYGEQAIDVTSGKDYVVERCAPQ 359

The following BLAST results are available for this feature:

BLAST of Gchil569.t1 vs. uniprot

BLAST of Gchil569.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0U5_9FLOR	5.980e-134	63.19	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 13..33
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..12
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..351
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004380_pilon	contig	tig00004380_pilon:285408..286463 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil569.t1	Gchil569.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004380_pilon 285408..286463 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil569.t1 ID=Gchil569.t1|Name=Gchil569.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=352bp
MAVISSTPSCLSYAFYVRFCSLLALLLLIFNIVRLHHSAFHRTLSPVAVQ
PLSGHSVLRPVEPAREIFLQPSAVKIEGIGAVLSGLKPVLLLSQYTNARI
TMHDNFTGHGYNMSQYLQFGTPFPPWQRVPCNITFNMRKLLVRIVEQCEH
FNLSELHQLRLFDKCNSISISKYIAHPRVCLKHTQNLVRSFTKFRNIDDT
PKNHVCVLRRGGDIEHIILAGEGNKYAIDEQLTLPILHNVSRRGGKVALI
TETEHEQQLKALYKPHVFSNFDSLERVVSLLGRCRCTFVSSGSSFAAAMM
QITRPSYIVYTSSREGFSFEERWYSFEEYGPSAIDVNSAPQHVVDKCAPR
W*