Gchil5679.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5679.t1
Unique NameGchil5679.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length236
Homology
BLAST of Gchil5679.t1 vs. uniprot
Match: A0A2V3IT57_9FLOR (Beta/alpha-amylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT57_9FLOR)

HSP 1 Score: 325 bits (834), Expect = 3.070e-110
Identity = 149/202 (73.76%), Postives = 171/202 (84.65%), Query Frame = 0
Query:    1 MRHCYLLEKLADGTFSTPSPDNRLRDASHIRHGFRVFRLPFRRIQFVLTNGTNRNWEDNNGNNYVIDVPGRYVVEHGIRRVADADASECFQTVCRPNDRYIQLSFRADLWQKCYCSCQIDNHQWTKPPGKQMTLVPNQQQARYYELVIEASRMACAFNDGGENWDSRLNNNYLIGCPGKYQVSDGTVRYISPSDNDLQLMPM 202
            MR CYLLEKL D +F+ PS  N+LRDASHIR GFRVFRLPFR I+FVLTNGT+RNWEDNNG+NY I  PGRYVVEHGIRRVADADA+ECFQT+CRP D++IQ+SFRADLW  CYCS Q D+ +WTK PG+ M L+    + R++E+V+EASRMACAFNDGGENWDSRLN NYLIGCPGKYQVS G VRYISPSD DL+  P+
Sbjct:   20 MRFCYLLEKLPDSSFTKPSAQNQLRDASHIRDGFRVFRLPFRPIEFVLTNGTDRNWEDNNGHNYTIQQPGRYVVEHGIRRVADADANECFQTLCRPLDKFIQISFRADLWHTCYCSYQRDDLEWTKAPGELMKLLSTPSEGRHFEIVVEASRMACAFNDGGENWDSRLNKNYLIGCPGKYQVSAGVVRYISPSDPDLKRQPL 221          
BLAST of Gchil5679.t1 vs. uniprot
Match: A0A7S3EKX2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKX2_9RHOD)

HSP 1 Score: 148 bits (374), Expect = 7.630e-41
Identity = 77/175 (44.00%), Postives = 108/175 (61.71%), Query Frame = 0
Query:   24 LRDASHIRHGFRVFRLPFRRIQFVLTNGTNRNWEDNNGNNYVIDVPGRYVVEH-GIRRVADADASECFQTVCRPNDRYIQLSFRAD-LWQKCYCSCQIDNHQWTKPPGKQMTLVPNQQQARYYELVIEASRMACAFNDGGENWDSRLNNNYLIGCPGKYQVSDGTVRYISPSDND 196
            LRDAS I+ GFRVFR+    ++F LTNG++RNWE+N+G NY I+  GRY+V +  + RV DAD   C + + R NDR+I+L ++    W  C      D+  W + PG+ MT + + +  + + L  EA  M  AF DG E WDS ++ NY +G PGKY V DG  +YI PS+ D
Sbjct:   47 LRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLVSYKSMSRVGDADVGSCLRAM-RKNDRFIELIYQPPPSWLGCSIIYSKDDDPWLEAPGEAMTRIKS-KDPQLFMLRTEAQHMTFAFFDGVEEWDSNMDENYKVGLPGKYFVRDGVCKYIGPSEMD 219          
BLAST of Gchil5679.t1 vs. uniprot
Match: M1UQ90_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1UQ90_CYAM1)

HSP 1 Score: 118 bits (296), Expect = 4.860e-29
Identity = 71/192 (36.98%), Postives = 105/192 (54.69%), Query Frame = 0
Query:   12 DGTFSTPSPDNRLRDASHIRHGFRVFRLP-FRRIQFVLTNGTNRNWEDNNGNNYVIDVPGRYVVE-HGIRRVADADASECFQTVCRPNDRYIQLSFRADL-WQKCYC--SCQID-NHQWTKPPGKQMTLVPNQQQARYYELVIEASRMACAFNDGGENWDSRLNNNYLIGCPGKYQVSDGTVRYISPSDNDL 197
            DG   TP+   R  DASHIR GFRVFR+   +R++F +T+G  R W++N G NYVI  PGRYVV   G++R  D D  E  +   +  D+YI++ +RA   W + Y   + Q++    WT  PG+ M   P +Q   +  L+  A  +    N+GGE +D+    N+    PG+Y V     +Y+  S+ DL
Sbjct:   45 DGGKWTPNRTYRFEDASHIREGFRVFRVSGCKRLEFAITDG-KRYWDNNGGQNYVITEPGRYVVSIRGLQRRGDVDMDEIRRQQTKATDQYIEILYRAPADWSQVYIMYAKQLNAKADWTSAPGELMLRNPEEQNLYFIRLL--AKELEFVLNNGGEEYDNCKGKNFKCHTPGRYLVQHEDCKYLGRSERDL 233          
BLAST of Gchil5679.t1 vs. uniprot
Match: A0A7J7ICQ2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICQ2_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 4.320e-27
Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 0
Query:   12 DGTFSTPSPDNRLRDASHIRHGFRVFRLP-FRRIQFVLTNGTNRNWEDNNGNNYVIDVPGRYVVE-HGIRRVADADASECFQTVCRPNDRYIQLSFRADL-WQKC---YCSCQIDNHQWTKPPGKQMTLVPNQQQARYYELVIEASRMACAFNDGGENWDSRLNNNYLIGCPGKYQVSDGTVRYISPSDNDL 197
            DG   TP+  ++  DASHIR GFRVFR+   +R++F +T+G  R W+DN G NYVI  PGRYVV  +G+ R  D D  E  +   +  D+YI++ +R+   WQ+    Y         WT  PG+ M  + N +++  + + + A  +   F DG   +D+R   NY    PG+Y V     +Y+  S  DL
Sbjct:   48 DGGPWTPNRTHKFEDASHIREGFRVFRVGGCKRLEFAITDG-KRYWDDNGGQNYVITEPGRYVVSINGLERRGDVDIEEIHRQQTKTVDQYIEILYRSPPGWQRAHILYAKQLNAQGGWTPSPGEPM--LRNPEESGLFFIRLLAKELEFVFTDGENAYDNRKGKNYKCHTPGRYIVQYEQCQYLGRSQRDL 236          
BLAST of Gchil5679.t1 vs. uniprot
Match: A0A7S0BE94_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BE94_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 8.100e-21
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 0
Query:   24 LRDASHIRHGFRVFRLPFRRIQFVLTNGTNRNWEDNNGNNYVIDVPGRYVVEH-GIRRVADADASECFQTVCRPNDRYIQLSFRA-DLWQKCYCSCQIDNHQWTKPPGKQM 132
            LRDAS I+ GFRVFR+    ++F LTNG++RNWE+N+G NY+++  GRY+V +  + RV DAD   C + + R +DR+I+L ++    W  C      DN  W + PG+ M
Sbjct:   47 LRDASDIKPGFRVFRVKAWTLEFYLTNGSSRNWENNSGKNYLVEESGRYLVSYKSMSRVGDADIGSCIRAM-RRHDRFIELIYQPPSSWLGCSIIYSKDNEPWLEAPGEAM 156          
BLAST of Gchil5679.t1 vs. uniprot
Match: A0A7S3A1A4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1A4_9RHOD)

HSP 1 Score: 82.4 bits (202), Expect = 1.910e-16
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query:   24 LRDASHIRHGFRVFRLPFRRIQFVLTNGTNRNWEDNNGNNYVIDVPGRYVVEH-GIRRVADADASECFQTVCRPNDRY 100
            LRDAS I+ GFRVFR+    ++F LTNG++RNWE+N+G NY I+  GRY+V +  + RV DAD   C + + R NDRY
Sbjct:   47 LRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLVSYKSMSRVGDADVGSCLRAM-RKNDRY 123          
The following BLAST results are available for this feature:
BLAST of Gchil5679.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IT57_9FLOR3.070e-11073.76Beta/alpha-amylase n=1 Tax=Gracilariopsis chorda T... [more]
A0A7S3EKX2_9RHOD7.630e-4144.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1UQ90_CYAM14.860e-2936.98Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A7J7ICQ2_9RHOD4.320e-2735.94Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A7S0BE94_9RHOD8.100e-2143.24Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3A1A4_9RHOD1.910e-1652.56Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 92..192
e-value: 1.4E-16
score: 62.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 3..86
e-value: 3.0E-6
score: 29.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:742163..742870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5679.t1Gchil5679.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 742163..742870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5679.t1 ID=Gchil5679.t1|Name=Gchil5679.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=236bp
MRHCYLLEKLADGTFSTPSPDNRLRDASHIRHGFRVFRLPFRRIQFVLTN
GTNRNWEDNNGNNYVIDVPGRYVVEHGIRRVADADASECFQTVCRPNDRY
IQLSFRADLWQKCYCSCQIDNHQWTKPPGKQMTLVPNQQQARYYELVIEA
SRMACAFNDGGENWDSRLNNNYLIGCPGKYQVSDGTVRYISPSDNDLQLM
PMPEKPICAHPAQPGQSTSISSDACTVAKTRTEMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold