Gchil5621.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5621.t1
Unique NameGchil5621.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length90
Homology
BLAST of Gchil5621.t1 vs. uniprot
Match: A0A1X6NRP5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRP5_PORUM)

HSP 1 Score: 81.6 bits (200), Expect = 3.380e-18
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    7 RRQWLEAFKFSVYVVTPIAATVYLGTGAYPYLEKIIRNTSYIVYPPEGDTPPTSTNEIKLAREKR 71
            RR+ LE FKFSVYV+ PI A+ + G+GAYPYLE+II+  SY+VYPPEG  PP      +L   +R
Sbjct:   20 RRRRLEGFKFSVYVLLPIGASYFFGSGAYPYLERIIQQRSYVVYPPEGPAPPKPNEMSRLVERER 84          
BLAST of Gchil5621.t1 vs. uniprot
Match: A0A2R5GFG8_9STRA (Protein PET100-like, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFG8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.900e-9
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    4 GHARRQWLEAFKFSVYVVTPIAATVYLGTGAYPYLEKIIRNTSYIVYPPEGDTPPT-STNEIKLA 67
            G  RR  LE FKFSVY++ PIA   Y+       ++K+IR   YIVYPPEG  PP  S NEI  A
Sbjct:    2 GIPRRAPLEMFKFSVYILLPIATIAYVSQPE--SIDKLIRAREYIVYPPEGKRPPQGSKNEIAEA 64          
BLAST of Gchil5621.t1 vs. uniprot
Match: A0A176VMF4_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VMF4_MARPO)

HSP 1 Score: 55.8 bits (133), Expect = 1.740e-8
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    1 MASGHARRQWLEAFKFSVYVVTPIAATVYLGTGAYPY----LEKIIRNTSYIVYPPEGDTPPT 59
            M++  A++  LE FKF  Y+  PI     L   A+ Y    LE+IIRN SY+VYPPEG  PPT
Sbjct:    1 MSAVGAKKGVLEVFKFGCYISIPI-----LMMSAFAYDPQNLERIIRNRSYVVYPPEGPRPPT 58          
BLAST of Gchil5621.t1 vs. uniprot
Match: A9U242_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U242_PHYPA)

HSP 1 Score: 55.5 bits (132), Expect = 2.590e-8
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    1 MASGHARRQWLEAFKFSVYVVTPIAATVYLGTGAYPYLEKIIRNTSYIVYPPEGDTPPTSTNEIK 65
            M++   ++  LE FKF  Y+  PI   +Y        LEKIIRN SY+VYPPEG  PP S +EI+
Sbjct:    1 MSALGKKKGLLEVFKFGTYIAIPIVM-MYAFANNSDNLEKIIRNRSYVVYPPEGPRPP-SGDEIR 63          
BLAST of Gchil5621.t1 vs. uniprot
Match: A0A443NR25_9MAGN (Sporulation-specific 71 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NR25_9MAGN)

HSP 1 Score: 55.5 bits (132), Expect = 2.710e-8
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 MASGHARRQWLEAFKFSVYVVTPIAATVYLGTGAYPYLEKIIRNTSYIVYPPEGDTPPTSTNEIKLAREKR 71
            M+S    +  LE  KF++YV  PI   +Y       +L+K++RN SY+VYPPEG  PP+     ++ARE R
Sbjct:    1 MSSLGTSKGILEIAKFALYVSVPITL-MYSFAHNSEFLQKVVRNRSYVVYPPEGPRPPSPEELREMAREMR 70          
BLAST of Gchil5621.t1 vs. uniprot
Match: A0A8J5XWM3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XWM3_DIALT)

HSP 1 Score: 52.8 bits (125), Expect = 3.830e-7
Identity = 28/83 (33.73%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    1 MASGHARRQWLEAF---KFSVYVVTPIAATVYLGTGAYPYLEKIIRNTSYIVYPPEGDTPPTSTNEIKLAREKRISKLQEYRA 80
            MA+    + W  AF   K ++YV  P+         A   +EKI+ N  Y++YPPEG+ PPT+ +++K    +R +K++E +A
Sbjct:    1 MATRFRSKFWSHAFENAKVALYVFCPVVTVFVFSQPA--MVEKIVTNRMYVLYPPEGERPPTTLDDVK----ERAAKIREAQA 77          
BLAST of Gchil5621.t1 vs. uniprot
Match: A0A061SH86_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SH86_9CHLO)

HSP 1 Score: 52.0 bits (123), Expect = 5.540e-7
Identity = 26/49 (53.06%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   11 LEAFKFSVYVVTPIAATVYLGTGAYPYLEKIIRNTSYIVYPPEGDTPPT 59
            LEAFKF  Y+  PI  T +   G+   LE II+N SY+VYPP G  PPT
Sbjct:   11 LEAFKFFCYLSIPIVMT-WAVAGSPTNLEAIIKNRSYVVYPPAGPKPPT 58          
The following BLAST results are available for this feature:
BLAST of Gchil5621.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A1X6NRP5_PORUM3.380e-1855.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2R5GFG8_9STRA2.900e-950.77Protein PET100-like, mitochondrial n=1 Tax=Hondaea... [more]
A0A176VMF4_MARPO1.740e-847.62Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A9U242_PHYPA2.590e-846.15Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A443NR25_9MAGN2.710e-840.85Sporulation-specific 71 n=1 Tax=Cinnamomum micrant... [more]
A0A8J5XWM3_DIALT3.830e-733.73Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A061SH86_9CHLO5.540e-753.06Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018625Protein Pet100PFAMPF09803Pet100coord: 11..73
e-value: 2.0E-6
score: 28.2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:74279..74629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5621.t1Gchil5621.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 74279..74629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5621.t1 ID=Gchil5621.t1|Name=Gchil5621.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=90bp
MASGHARRQWLEAFKFSVYVVTPIAATVYLGTGAYPYLEKIIRNTSYIVY
PPEGDTPPTSTNEIKLAREKRISKLQEYRADSQMGENRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018625Pet100