Gchil5583.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil5583.t1 vs. uniprot
Match: A0A2V3J6Q7_9FLOR (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Q7_9FLOR) HSP 1 Score: 518 bits (1333), Expect = 2.120e-184 Identity = 253/296 (85.47%), Postives = 274/296 (92.57%), Query Frame = 0
Query: 1 MPDSMLRALQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCEGRNEGGEYFRRATHTPAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLEQAEDW 296
MPD +LRALQT ILRICQ P+GLTDGEIVQ+LD DVKPKHRL+SYNELLR GRLKLLKK++GEG KKDVVVYQWVSLKDAEKFRGLDA ERMVYDMI+RSGQNGVTKRDMKFRTNIQN SELKQIVERLIAR L+KEIKSVQG NKKVYIASEVEPSAAHTGGPWYND++EFDTEFIETIYA +L YM TME+VT++SVTDYVADLKIS+E L KSDIRQLMMTMLYDSVIE+CEGR +GG+Y+RRAT TP VNHL+S+PCGSCPVFHDCSPDGVISPKTCVYMKEWLEQ DW
Sbjct: 1 MPDPLLRALQTTILRICQTCPEGLTDGEIVQRLDTDVKPKHRLDSYNELLRTGRLKLLKKTVGEGPTKKDVVVYQWVSLKDAEKFRGLDATERMVYDMIERSGQNGVTKRDMKFRTNIQNTSELKQIVERLIARGLVKEIKSVQGANKKVYIASEVEPSAAHTGGPWYNDDKEFDTEFIETIYAHILSYMGTMEFVTIESVTDYVADLKISNEDLTKSDIRQLMMTMLYDSVIEECEGRKDGGDYYRRATSTPGVNHLSSVPCGSCPVFHDCSPDGVISPKTCVYMKEWLEQTTDW 296
BLAST of Gchil5583.t1 vs. uniprot
Match: R7QCX5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX5_CHOCR) HSP 1 Score: 359 bits (921), Expect = 4.800e-122 Identity = 171/273 (62.64%), Postives = 213/273 (78.02%), Query Frame = 0
Query: 24 LTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCEGRNEGGEYFRRATHTPAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLEQAEDW 296
+TD E+ +L D K K R+ +YN+LL GR++L + G G +K V+YQWVS +DAEKF+GLDA++RMV D++ + GQNG TK++MKFRTNIQ+ +ELKQI+ERLI+R LIKEIKSVQGTNK++YI + +EPS HTGGPWYND+QEFDT FIE IY QVL ++ YVTVD VT YVA++K+S+E L SDI+ LM TMLYD+VIE CEG+ +G EYFR TPAVNHL SIPCGSCPVFHDC P GVISP+TCVYM +WL+ DW
Sbjct: 1 MTDKEVTAKLHFDTKAKIRIAAYNKLLAKGRIRLAARVTGTGENRKQQVLYQWVSAEDAEKFKGLDASDRMVLDLVVKGGQNGATKKEMKFRTNIQSNTELKQILERLISRNLIKEIKSVQGTNKRIYIKAGLEPSTLHTGGPWYNDDQEFDTVFIEAIYEQVLAFIKKTNYVTVDQVTSYVAEIKLSNEELSHSDIKSLMNTMLYDTVIELCEGKGDGHEYFRHVQPTPAVNHLASIPCGSCPVFHDCVPGGVISPQTCVYMGDWLKSVTDW 273
BLAST of Gchil5583.t1 vs. uniprot
Match: A0A6T5WUV9_9RHOD (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5WUV9_9RHOD) HSP 1 Score: 201 bits (511), Expect = 2.040e-59 Identity = 109/303 (35.97%), Postives = 177/303 (58.42%), Query Frame = 0
Query: 8 ALQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCE-------------------GRNEGGEYFRRATHTPAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLE 291
AL ++L + P G +D EI +Q+ V PK R+++YN LL+ GRL +LK+ +G VV+Y+ VS + A K RGL A ER+V+ I++ G G+ RD++F++ +Q ++ ++++ L RRL+K +KSV+ NKK Y+ +++ PS TGGPWY+D++E+DTEFI +Y Q+L + ++ + +V T ++ + IS E L + ++ L+ TML+D +E E G ++ Y R + + L +PCG CP+ +C P GVISP TC Y+ EWL+
Sbjct: 21 ALLESLLSAARSRPGGASDQEIREQIGPSVTPKMRMDAYNHLLQKGRL-VLKRRESDG-----VVLYEEVSAEAAAKLRGLGAEERLVFAAIEKCGNVGIWTRDLRFKSGLQQ-NQFSKVLKTLETRRLVKAVKSVKARNKKFYMLADLAPSKELTGGPWYSDQKEYDTEFIFALYTQLLRFFRSLPHASVQDATRFIENSGISKEKLEREHVQALIDTMLFDGALEAFEDKGSHESFMADALGQSSATGLSKSPRYCVRPSRVHVQSVLAEMPCGLCPLQRECHPGGVISPSTCKYLDEWLD 316
BLAST of Gchil5583.t1 vs. uniprot
Match: A0A2P6V1J4_9CHLO (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1J4_9CHLO) HSP 1 Score: 184 bits (467), Expect = 3.190e-53 Identity = 103/290 (35.52%), Postives = 162/290 (55.86%), Query Frame = 0
Query: 5 MLRALQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCEGRNEGGEYFRRATHTPAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLEQAE 294
M R ++ +L +C+ HP+G+ D + +L DV R + N LL + +L++L + +Y+ + D +F+GL A + +VY IQ +G G+ RDMK RTN+Q P K I++ L R L+K +KSVQ ++KVY+ E+EP+ TGGPW+ + FD+EF+ + L Y+ + ++ + ++ + IS +AL++ D+ +++ T+ YD IEQ E + Y P LTSIPCG CPVF +C G ISP TC Y ++WLEQ E
Sbjct: 1 MSRKVEEMVLAVCRKHPEGVADTVLESELP-DVSVNDRALAINSLLSSMKLQILVNPADPSSH-----IYKASTTGDTARFKGLTAEDMLVYQCIQAAGNIGIWTRDMKQRTNLQQPKVTK-ILKALEERLLVKSVKSVQNASRKVYMLYELEPAKELTGGPWFGPDA-FDSEFVAVLQETTLSYIKSKGQPSLADIVRFIKETGISKQALQEDDVERIINTLEYDGKIEQIEEDDGDRHYRMMLMRIPESTPLTSIPCGVCPVFSECVEGGKISPATCTYYQDWLEQME 282
BLAST of Gchil5583.t1 vs. uniprot
Match: E1Z933_CHLVA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z933_CHLVA) HSP 1 Score: 182 bits (462), Expect = 1.590e-52 Identity = 103/288 (35.76%), Postives = 167/288 (57.99%), Query Frame = 0
Query: 5 MLRALQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCEGRNEGGEYFRRATHT-PAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLE 291
M R ++ IL +C+ HP+G+ D + +L V R + N LL + +L++L + +Y+ ++ DA +F+GL A + +VY IQ +G G+ RDMK RTN+Q P ++ +I++ L R L+K IKSVQ ++KVY+ E+EP+ TGGPWY + FD+EFI + + Y+ T T+ + ++ + IS +AL++ D+ +++ T+ D IE EG +G ++R + P TSIPCG CPVF++C G ISP+TC+Y +WL+
Sbjct: 1 MSRKVEELILTVCRKHPEGVQDTALEAELPS-VAVNDRAVAINSLLASLKLQILVNPADPSSH-----IYKASAVGDATRFKGLTAEDMLVYQCIQGAGNMGIWTRDMKQRTNLQQP-KINKILKTLEERCLVKSIKSVQNASRKVYMLYELEPAKELTGGPWYGPDA-FDSEFITVLQEATMSYINTKGDATLADIVRFIKETGISKQALQEDDVERIINTLECDGKIEGVEGDEDGLPHYRLPLMSIPEATPFTSIPCGVCPVFNECVEGGKISPQTCIYFDQWLD 280
BLAST of Gchil5583.t1 vs. uniprot
Match: A0A1Y1IK16_KLENI (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK16_KLENI) HSP 1 Score: 179 bits (453), Expect = 4.550e-51 Identity = 107/295 (36.27%), Postives = 166/295 (56.27%), Query Frame = 0
Query: 2 PDSMLRALQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCE----GRNEGGEYFRRATHT-PAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLE 291
PDS + L+ AI +CQ G+T + +L D+ + ++ N LL +L++ ++ + Y+ V+ +D +FRGL + E +VY +IQ S G+ RD+K R+N+Q P ++ +I++ L RRLIK +KSV N+KVY+ E+EPS TGG WY EQEFD EFI + V ++ VT++ + +V + LR D +Q+ T++YD +E+ + ++R + + P N TSIPCG CPV H+CS DG+ISP TCVY +EWL+
Sbjct: 6 PDSAVFRLEEAIANLCQESDGGVTQKMLQDELP-DIPLEELGSALNVLLSRHQLQMYTQA--------STLYYKPVNQEDRVRFRGLGSEEMLVYQIIQASQNMGIWTRDLKLRSNLQQP-QITKIIKTLEGRRLIKAVKSVASKNRKVYMLYEIEPSREITGGAWYT-EQEFDAEFIGVLREAVKKFVENQGKVTLEEIAAFVKSSGATKVDLRLEDYQQVANTLVYDGEVEEISEFDPDEDADTTFYRMSPMSVPETNAFTSIPCGVCPVLHECSDDGLISPATCVYYQEWLQ 289
BLAST of Gchil5583.t1 vs. uniprot
Match: I0Z1U2_COCSC (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1U2_COCSC) HSP 1 Score: 175 bits (443), Expect = 9.330e-50 Identity = 100/284 (35.21%), Postives = 162/284 (57.04%), Query Frame = 0
Query: 9 LQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCEGRNEGGEYFRRATHT-PAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLE 291
++ +IL +C+ HP+GL + + Q + R + N LL RL++L+ + + +VYQ V ++A K +GL A + +VY I ++G G+ +D+K RTN+Q P ++ +I++ L R L+K +KSV ++KVYI E+EP+ TGG WY Q+FD EFI+ + Y+ T++ V D+V S LR +D+ ++ T+ +D ++E ++ GE +R A H P + TS+PCG CPV ++CS GVISP TC Y + WL+
Sbjct: 5 IEESILALCRQHPEGLPEAVLEQY----IPATQRTTAMNNLLAKHRLRILQHP------RDNSLVYQEVIQEEAAKLKGLSAEDLLVYQHIAQAGDTGIWTKDLKNRTNLQQP-QITKILKNLDQRSLVKSVKSVINPSRKVYILFELEPARELTGGAWYTG-QDFDAEFIQVLQQACHKYIENEGVATLEEVADFVRTKGFSRVELRDADVLCILRTLEFDGLVES--SLSDDGEVYRPARHVVPKTSPFTSMPCGVCPVINECSDGGVISPSTCTYYQTWLD 274
BLAST of Gchil5583.t1 vs. uniprot
Match: A0A061SD36_9CHLO (DNA-directed RNA polymerase III subunit C34 n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SD36_9CHLO) HSP 1 Score: 176 bits (447), Expect = 2.480e-49 Identity = 101/284 (35.56%), Postives = 167/284 (58.80%), Query Frame = 0
Query: 10 QTAILRICQGHPDGLTDGEIVQQLDK-DVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCEGRNEGGEYFRRAT-HTPAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLE 291
+ I+ +C+ H +GL++ + ++L D+ K + N LL+ RL++ K G +VY+ + ++DA KF+GL E +VY +I+++G G+ +DMKF++N+Q P ++ +I++ L R L+K ++SV G NKKVY+ E+EPS TGG WY EQ+FD+EFIE + ++ VT+ V +++ LR+ D+ ++ +++YD I+ + ++ E+FR A P + TSIPCG CPVF C PDG ISP C+Y +WL+
Sbjct: 92 EQGIIDLCRKHSEGLSEAVLDKELSGFDISAKAA--AINSLLQQQRLQIFKSPDGS-------LVYKEIKVEDAAKFKGLGPQEMLVYQLIKQTGNKGMWTKDMKFQSNLQQP-QITKILKTLEGRNLVKSVRSVTGGNKKVYMLYELEPSRELTGGAWYT-EQKFDSEFIEALREACSQFIHKQGDVTLGDVVEFIHSRGFVKVDLREEDVLSVINSLVYDGRIDSVDDEDDV-EHFRPAMLKIPRQSAFTSIPCGVCPVFAQCRPDGPISPAKCIYFDKWLD 363
BLAST of Gchil5583.t1 vs. uniprot
Match: A0A5J4XES7_9CHLO (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XES7_9CHLO) HSP 1 Score: 167 bits (424), Expect = 7.150e-47 Identity = 100/287 (34.84%), Postives = 163/287 (56.79%), Query Frame = 0
Query: 6 LRALQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTMEYVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCEGRNEGGEYFRRATHT-PAVNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLE 291
+ A TAIL + + P+G+ + +L R ++ N LL++ +++L A + VY+ V + + +GL +VY I+ +G GV +DMKF+TN+Q P ++ +I++ L R L+K IK V +KK Y+ ++EP+ TGG WY D Q++D+EFI+ + Q ++ T++ V+ ++ D IS LR D+ ++ T+ YD IE+ + +G + FR+A P + TSIPCG CPVF++C+PDG ISP TCVY ++WLE
Sbjct: 1 MEAAMTAILDLFKRMPEGIPQHVVPAELAGTPASVQR-DAVNRLLKDKKIQLQM-----SANDSNTFVYKEVEAGKSARLKGLAPEFLLVYQCIEAAGNTGVWTKDMKFKTNLQQP-QITKILKELETRTLVKAIKPVNQPSKKFYMLYDLEPAREITGGAWYTD-QDYDSEFIQVLQTQCFKFIKQEGDPTLEDVSTFIHDKGISRVQLRDEDVMMILNTLEYDGQIEKIDSP-DGEDRFRQALLAIPESSAFTSIPCGVCPVFNECTPDGPISPATCVYFQQWLE 278
BLAST of Gchil5583.t1 vs. uniprot
Match: UPI001939F246 (DNA-directed RNA polymerase III subunit RPC6-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939F246) HSP 1 Score: 166 bits (421), Expect = 4.230e-46 Identity = 96/303 (31.68%), Postives = 167/303 (55.12%), Query Frame = 0
Query: 9 LQTAILRICQGHPDGLTDGEIVQQLDKDVKPKHRLNSYNELLRNGRLKLLKKSIGEGAEKKDVVVYQWVSLKDAEKFRGLDAAERMVYDMIQRSGQNGVTKRDMKFRTNIQNPSELKQIVERLIARRLIKEIKSVQGTNKKVYIASEVEPSAAHTGGPWYNDEQEFDTEFIETIYAQVLGYMMTME------------------YVTVDSVTDYVADLKISHEALRKSDIRQLMMTMLYDSVIEQCE-GRNEGGEYFRRATHTPA-VNHLTSIPCGSCPVFHDCSPDGVISPKTCVYMKEWLE 291
L+ IL +C +P G+ D E +Q+ + + K R+ + N+LL G+++LLK + G ++Y+ A + +G+D +++VY +I+ +G G+ RD++ R N+ +E+ +I++ L R+LIK +KSV + KKVY+ +EP ++ TGG WY+ Q+F++EF++ + Q ++ E Y + + V +++++L IS L DI ++ T++YDS +E G +G +A H+ +T PC CPVF C P GV+SP+ CVYM EW+E
Sbjct: 15 LEDRILAMCAEYPKGIGD-EFIQKKEPQIDSKERVAAINKLLTMGKIELLKGTSG--------LIYRLKCTTGASQIKGIDNQDKLVYQVIESAGNKGIWIRDIRHRCNLML-TEVNKILKNLENRKLIKAVKSVTASKKKVYMLFNLEPDSSITGGAWYSG-QDFESEFVDVLNQQCYKFLQQKEESAASETAISPNARQAASYASSEEVLNFISNLGISKVKLSVEDIETILNTLIYDSKVEMMVVGTKDGTNKLYKAVHSLVEATDMTRAPCAVCPVFDQCRPGGVVSPEKCVYMSEWME 306 The following BLAST results are available for this feature:
BLAST of Gchil5583.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil5583.t1 ID=Gchil5583.t1|Name=Gchil5583.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=297bpback to top |