Gchil5555.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5555.t1
Unique NameGchil5555.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length687
Homology
BLAST of Gchil5555.t1 vs. uniprot
Match: A0A2V3J975_9FLOR (Nucleoporin GLE2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J975_9FLOR)

HSP 1 Score: 505 bits (1301), Expect = 3.450e-171
Identity = 233/326 (71.47%), Postives = 279/326 (85.58%), Query Frame = 0
Query:  322 PDPPDDTISRLRFSSIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINSFATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMNAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRNNTESTYVVLHSLEDDELQLSKGG 647
            P  PDDTISRLRFS   +P  LAASSWNGT RVWKVDP+ GNATAVSL+T++ P+LDL+WL +GG ++YAG  ++A+RWDLASE  + VA H+  I+CT ++  +NSFATA WD+ LRYWDIRSPTG PLL+V LS+RAYAMDARGPL+VLALA+RKIAIYDVRKP+  +VER+TQL+YQTRC+ TWP++MGYNVG VEGKV VE+VQ SK  Q+YSFFCH+DKQG+  AVNAIRFH +SGAFCTA +DGM+HFWDKDRRDRA MRRFQ MGQA+CD+DFS DG+M AYAVGYDW+QGSAGR+N ESTYVVLHS+ED EL  ++GG
Sbjct:   87 PGSPDDTISRLRFSPTSTP-FLAASSWNGTTRVWKVDPAAGNATAVSLQTESTPVLDLTWLSDGGTIVYAGVGKLAYRWDLASERKEIVAAHNEPIRCTCEVSTVNSFATAGWDKRLRYWDIRSPTGNPLLDVQLSERAYAMDARGPLMVLALADRKIAIYDVRKPNAPYVERFTQLRYQTRCIATWPDSMGYNVGSVEGKVGVEYVQPSKVDQSYSFFCHRDKQGNSKAVNAIRFHQQSGAFCTASNDGMVHFWDKDRRDRAPMRRFQKMGQAVCDVDFSSDGNMLAYAVGYDWIQGSAGRSNMESTYVVLHSIEDGELHRARGG 411          
BLAST of Gchil5555.t1 vs. uniprot
Match: R7QHN8_CHOCR (WD40 repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHN8_CHOCR)

HSP 1 Score: 365 bits (936), Expect = 2.260e-117
Identity = 181/355 (50.99%), Postives = 244/355 (68.73%), Query Frame = 0
Query:  309 SNAPANPNNGYLLPDPPDDTISRLRFS-SIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINSFATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMN-AVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGR-NNTESTYVVLHSLEDDELQLSKGGGSXXXXXXXXGNG 660
            S A  NPNNGY++P PPDDT+SRLRFS +      L ASSWNG+ R WKV+P+ G A AVS+    AP+LD +W  +G  +   GAS+I + WDLA+ +   VA HD  +    D++     AT +WD++LRYWD+R+PTG+P+ +VPL+DRAYAMD + P +V+ LA+RK+ ++DVRKP+  F E+YT  KYQTRCV+ WP+ MGY VG V+G+VSV++VQ+ +   + SF CH+DK   +  A++AIRFH  SG F TA SDG   FWDKDR++RA  RRF+ M   + D+DF+ DG  YAYAVGYDW +G++G   + + TY++L  L D EL     GG  XXXXXX G G
Sbjct:    6 SGAANNPNNGYVVPQPPDDTVSRLRFSPASTGDIYLIASSWNGSVRCWKVNPNQGLAVAVSMTEQGAPVLDCAWAADGSTVYCGGASKIVNSWDLATGATTIVAAHDEPVTQVCDVEEKKLLATTSWDKTLRYWDVRAPTGSPVGSVPLADRAYAMDVKEPTVVVGLADRKLVVFDVRKPATPFKEKYTLHKYQTRCVSIWPDRMGYLVGSVDGRVSVDYVQELEPGASTSFSCHRDKANRVGYAIHAIRFHKPSGMFATAASDGRFSFWDKDRKERARTRRFEKMNGPVTDIDFAADGKTYAYAVGYDWTKGASGNVTSPDQTYIILDRLGDGELDSKPSGGRGXXXXXXRGGG 360          
BLAST of Gchil5555.t1 vs. uniprot
Match: A0A6T6AZA7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AZA7_9RHOD)

HSP 1 Score: 293 bits (751), Expect = 1.310e-89
Identity = 138/340 (40.59%), Postives = 218/340 (64.12%), Query Frame = 0
Query:  314 NPNNGYLLPDPPDDTISRLRFS--SIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINS----FATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMNAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRNNTES-TYVVLHSLEDDELQLSKG 646
            NPN   L+   P+D +  LRFS  S+     L A SW+G  R W+V  + G  + V +   + P+L ++W  +G  +  AGA ++A  W+  +    P+A HD  I+    I  + +      T +WD+S+R+WD+R+PTGTP+  VP+S+R YAMD RGPL+V+  AERKI ++D+R PS  + ++++QLKYQTRC++T+P+  G+ VGGVEG+VS++ V+++    +++F CH+D  G + AVN+I FH   G F TAGSDG  +FWDKD R+R  +++F  + Q I    F+ DG+++ Y+VGYDW +G+   +   +  Y++LHS+ ++E+Q  KG
Sbjct:   35 NPNGDILVQQCPNDGVQELRFSPSSLAPKNFLVAGSWDGEVRCWEVQGN-GQTSPVGMYKHDGPVLSVAWSADGQAVFSAGADQLAKMWNPVTNQAVPIAKHDGVIRHIFYIPDMGNGSPAVVTGSWDKSVRFWDVRAPTGTPMGTVPVSERIYAMDVRGPLMVVGTAERKIYVFDIRSPSRPYSDKFSQLKYQTRCISTFPDQTGFAVGGVEGRVSIDHVREADRPNDFAFKCHRDTDGSIYAVNSISFHEGYGTFATAGSDGAFNFWDKDSRNR--LKQFHKLDQPIMSTAFNHDGTIFGYSVGYDWSKGAESHDPANAKNYILLHSVRENEIQSRKG 371          
BLAST of Gchil5555.t1 vs. uniprot
Match: A0A7S0ZFC4_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFC4_9RHOD)

HSP 1 Score: 291 bits (744), Expect = 6.900e-89
Identity = 147/343 (42.86%), Postives = 217/343 (63.27%), Query Frame = 0
Query:  311 APANPNNGYLLPDPPDDTISRLRFS-SIISPC-LLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINS----FATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMNAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRNNTESTYVVLHSLEDDELQLSKGG 647
            AP NPNN  L+ +PP+D IS + FS S + P   L A SW+   R W+V  S G    V +   +AP+L ++W  +G  +  AG  + A  W  A+   Q VA HDA IK    +  + +      T +WD+S++YWDIR PTG+P+ +VP+S+R Y+MDA G LLV+A A+RKI IYDVRKP+  + E+ + LKYQTR V+ +P+  G+ VG VEG+VS++ V ++  K +++F CH+D  G + AVN+I FH   G   TAGSDG   FWDKD + R  +++FQ +   I    F+ +G++YAYAV YDW +G+   N +  +Y++LH+++D E++  KGG
Sbjct:   11 APNNPNNDILVSEPPNDGISSMAFSPSALRPKNFLVAGSWDNQVRCWEVQQS-GQTVPVGMINHDAPVLSVAWSTDGSAIFSAGCDKTAKMWSPATNQQQLVAQHDAPIKSVLYVSDMGNGSPCIITGSWDKSVKYWDIRQPTGSPIGSVPMSERVYSMDAVGNLLVVATADRKILIYDVRKPTTPYFEKLSMLKYQTRVVSCFPDQTGFAVGSVEGRVSIDHVSEADKKNDFAFKCHRD-DGAIYAVNSIAFHEGYGTLATAGSDGGFTFWDKDAKQR--LKQFQKLPYPISTSCFNSEGNIYAYAVSYDWSKGAENHNPSNKSYILLHAVQDSEIRSKKGG 349          
BLAST of Gchil5555.t1 vs. uniprot
Match: A0A5J4YY25_PORPP (Protein RAE1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY25_PORPP)

HSP 1 Score: 284 bits (726), Expect = 3.360e-86
Identity = 140/335 (41.79%), Postives = 213/335 (63.58%), Query Frame = 0
Query:  314 NPNNGYLLPDPPDDTISRLRFS--SIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINS----FATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMNAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRNNTESTYVVLHSLEDDELQ 642
            NPNN  L+ +PP+D IS L FS  ++     L A SW+   R W+V  S G    V +   +AP+LD++W ++G  +  AG  + A  W +A+   Q +A HDA I     +  + +      T +WD++L+YWDIR+PTG+P+  VP+ +R YAMDARG LLV+  A+RKI +YDVRKP++ ++++ +QLKYQTR +  +P+  G+ VG VEG+VS++ VQ S    +++F CH++ + ++ +VN+I FH   G F TAGS+G   FWDKD + R  ++ F+ + Q I    FS DGS+YAYAVGYDW +G+ G       Y++LH ++D E++
Sbjct:   14 NPNNDILVSNPPNDGISSLAFSPRALAPKNFLVAGSWDNGVRCWEVQQS-GQTVPVGMIEHSAPVLDVTWREDGQAIFSAGCDKQAKMWSIATNQNQVIAQHDAPISKIAYLNDVGNGTPCVVTGSWDKTLKYWDIRAPTGSPMGVVPMPERVYAMDARGALLVVGTADRKILVYDVRKPTQPYLDKLSQLKYQTRVIACFPDQRGFAVGSVEGRVSIDHVQQSDRPNDFAFKCHRE-ENNIYSVNSIAFHEGYGTFATAGSNGTFIFWDKDSKQR--LKNFKKLLQPITASCFSADGSIYAYAVGYDWSKGAEGHVAGSKNYILLHGVQDAEVR 344          
BLAST of Gchil5555.t1 vs. uniprot
Match: M2XRG4_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRG4_GALSU)

HSP 1 Score: 272 bits (695), Expect = 1.750e-81
Identity = 124/335 (37.01%), Postives = 206/335 (61.49%), Query Frame = 0
Query:  314 NPNNGYLLPDPPDDTISRLRFS--SIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINS----FATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMNAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRNNTESTYVVLHSLEDDELQ 642
            NPNN  L+   P+DT+S + FS  ++     + A SW+   R+W++  S G+ + + +    AP+LD++W  +G  +   G  R    W+ A+  +QP+A HDA I+C      + +      T +WD++L+YWD R+ T TPL  V L +R YAMD  GP+LV+A A R+  +YD+R P+  + ++ + ++YQ+RCV  + +  G+ +G +EG+V +E++Q++  K ++++ CH+D+   + AVNAI FH   G F TAGSDG  +FWDKD + R  + +FQ + Q I    F+ DG+++ YAVGYDW QG   R+     Y++LH+++ +E++
Sbjct:   28 NPNNDKLVNQSPNDTVSSIAFSPKALAPNNFIVAGSWDNEVRLWQIQAS-GDTSPIGMIQHEAPVLDVAWSADGMTIFSVGCERTGKMWNPATNQVQPIAQHDAPIRCVRFASDLGTGSPAVVTGSWDKTLKYWDPRASTNTPLGTVTLPERVYAMDVLGPVLVVATANRRTLVYDIRNPTTPYRDKESPMRYQSRCVAIFTDMTGFALGSIEGRVGIEYIQEADQKLSFAYKCHRDRNNRIFAVNAISFHPVFGTFSTAGSDGYFNFWDKDSKMR--LHQFQQVNQPITCTAFNHDGTIFGYAVGYDWSQGVENRDPNAKNYILLHAVKPEEVR 359          
BLAST of Gchil5555.t1 vs. uniprot
Match: A0A1X6PDL1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDL1_PORUM)

HSP 1 Score: 266 bits (680), Expect = 2.130e-79
Identity = 132/338 (39.05%), Postives = 207/338 (61.24%), Query Frame = 0
Query:  312 PANPNNGYLLPDPPDDTISRLRFS--SIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINSFA----TAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMNAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRNN-TESTYVVLHSLEDDELQ 642
            P NPNN  L+ +PP+D IS L FS  ++     L A +W+   R +++  + G  T V L     P+LD+ W  +G  ++ A   + A  W +A++   PVA+H A+IK    +  +   A    T +WD++++YWD R+PTG P+  V + +R YAMD R PL+V+A A+RK+ +YD+R+P+  F E+ + LKYQTRCV T+ +  GY VG VEG+VS++ V ++   ++++F CH+D  G  +AVNAI FH   G F TAG+DG   FWDKD + R  +++F  +   I    F+ DG+++AYA  Y+W +G+A  N  T    ++LHS+ + E++
Sbjct:   12 PHNPNNDVLVSEPPNDGISSLAFSPTALAPKNFLIAGTWDNEVRCYEIS-NTGTTTPVGLIKHAGPVLDVGWSPDGQTIVSASCDKSAKIWSVATQQSNPVAMHAAAIKSIAYVGDMGGGAPAVITGSWDKTVKYWDPRAPTGQPMGTVNVPERVYAMDVRAPLMVVATADRKLQVYDIRRPTTPFHEKLSLLKYQTRCVATFADGTGYAVGSVEGRVSIDHVTEADRTKDFAFKCHRDPDGPAHAVNAIAFHQTWGTFATAGADGNFTFWDKDAKQR--LKQFSKLDTPISATCFNHDGTIFAYAASYEWSKGAAAHNPATARNNILLHSVTETEIR 346          
BLAST of Gchil5555.t1 vs. uniprot
Match: A0A2V3IGJ6_9FLOR (Protein RAE1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGJ6_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 3.180e-79
Identity = 136/340 (40.00%), Postives = 200/340 (58.82%), Query Frame = 0
Query:  312 PANPNNGYLLPDPPDDTISRLRFS--SIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINS----FATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQ-NYSFFCHKDKQGHM-NAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRN-NTESTYVVLHSLEDDELQ 642
            P NPNN  LL  PPDDT+  L FS  ++     L ++SW+   R W+V  S G +  V +     P+LD+SW  +G  +  AGA +IA  W +++     VA HDA I+     K + +      T +WD++++YWDIRSPTGTP+ +VPLSD+ Y MDAR                     + +F E+  QLKYQ RC+ T+P+  GY VG +EG+VS++ V +   K  +++F CH+D   ++   VN+I FH + G F TAG DG  +FWDKD + R  +++FQ M Q I    FS DG+++AYAVGYDW +G+A  N  T+  Y++LHS++  E++
Sbjct:   11 PHNPNNDVLLNQPPDDTVQSLAFSPQALAPKSFLVSASWDNQVRCWEVQ-SNGQSNPVGMTKHQGPVLDVSWASDGQSIFSAGADKIAQMWQISANKTTTVAAHDAPIRHIFYCKDMGNGSPCLVTGSWDKTIKYWDIRSPTGTPMGSVPLSDKVYCMDARAXXXXXXXXXXXXXXXXXXXXAVVFHEKLAQLKYQLRCLATFPDQSGYAVGSIEGRVSIDHVHEKDRKNLDFAFKCHRDPDNNVIYPVNSISFHEQHGTFATAGGDGGFNFWDKDNKHR--LKQFQRMNQPITATAFSTDGNIFAYAVGYDWSKGAAHHNPGTDRKYILLHSVQLAEVK 347          
BLAST of Gchil5555.t1 vs. uniprot
Match: R7QAP6_CHOCR (WD40 repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAP6_CHOCR)

HSP 1 Score: 262 bits (670), Expect = 5.070e-78
Identity = 135/347 (38.90%), Postives = 201/347 (57.93%), Query Frame = 0
Query:  309 SNAPANPNNGYLLPDPPDDTISRLRFS--SIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCIN------SFATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHM-NAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMDFSPDGSMYAYAVGYDWMQGSAGRNN-TESTYVVLHSLEDDELQLSK 645
            S  P NPN   LL DPP DT+  L FS  ++     L ++SW+   R W+V  S G++T + +   +AP+LD++W  +G  +  AGA ++A  W L+      VA HDA I+  H   C +      +  T +WD++++YWDIR+PTGT +  V LS + YAMD R P                  P E++ E+  QLK+Q RC+ T+P+  GY VG +EG+VS++ VQD   K +++F CH+D   ++   VN+I FH + G F TAG DG  +FWDKD + R  +++FQ + Q I    FS DG++YAYAVGYDW +G+   N  T   Y++LH ++  E++  K
Sbjct:    8 SAQPHNPNGDVLLTDPPSDTVQSLSFSPPTLAPKSFLVSASWDSEVRCWEVQ-SNGSSTPIGMIKHSAPVLDVAWSADGRSVFSAGAEKVAKMWMLSGNQTTTVAAHDAPIR--HVFYCNDLGNGSPALVTGSWDKTIKYWDIRAPTGTAMGTVQLSSKVYAMDVRAPXXXXXXXXXXXXXXXXXXPQEVYHEKIAQLKHQFRCLATFPDQAGYAVGSIEGRVSIDHVQDKDRKLDFAFKCHRDADSNVIYPVNSIAFHEQHGTFATAGGDGGFNFWDKDNKHR--LKQFQRVNQPITAGAFSSDGNIYAYAVGYDWSKGAQHHNPATNRKYILLHGVQQAEVRGKK 349          
BLAST of Gchil5555.t1 vs. uniprot
Match: A0A090M6J9_OSTTA (WD40/YVTN repeat-like-containing domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M6J9_OSTTA)

HSP 1 Score: 250 bits (639), Expect = 1.310e-73
Identity = 128/335 (38.21%), Postives = 200/335 (59.70%), Query Frame = 0
Query:  311 APANPNNGYLLPDPPDDTISRLRFSSIISPCLLAASSWNGTARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRWDLASESIQPVAIHDASIKCTHDIKCINSFATAAWDRSLRYWDIRSPTGTPLLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKYQTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMNAVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDM---DFSPDGSMYAYAVGYDWMQGSAGRNNTESTYVVLHSLEDDELQ 642
            APANPN  + + +PP D IS L +S + +   L A++W+G    ++V  + G A   +     AP+L  +W  +G  +   G   IA +WDLA++    VA HD++I+    I+ +N   T +WDR+LRYWD R     P L V L +R YA+D + PLLV+  AER+I I+D+ +P   +    + LKYQTRCV T+P+  GY VG +EG+V+V+ V+D+   +N++F CH++    + +VN+I FH   G F TAG+DG  +FWDKD     S +R +NM +    +   +F+ DG++YAYAV YDW +G     +     + LH++++ E++
Sbjct:    8 APANPNGDFTVANPPSDGISSLEWSPVGN--FLVATAWDGDVYCYEVAQN-GQAMPKASTKHEAPVLCSAWSADGASVFAGGCDNIAKKWDLATQQSTQVAAHDSAIRHMAWIQEVNLLVTGSWDRTLRYWDTRQQN--PALKVQLPERCYALDVKHPLLVVGCAERQIQIFDLNRPDVAYKNVMSPLKYQTRCVATFPDRSGYLVGSIEGRVAVQHVEDNLQSKNFTFKCHREGTQDIYSVNSISFHPTFGTFVTAGADGNYNFWDKD-----SKQRLKNMNKCPAPISCGNFNRDGTIYAYAVSYDWSKGGDNPLSNTPNNIYLHAVQETEVK 332          
The following BLAST results are available for this feature:
BLAST of Gchil5555.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J975_9FLOR3.450e-17171.47Nucleoporin GLE2 n=1 Tax=Gracilariopsis chorda Tax... [more]
R7QHN8_CHOCR2.260e-11750.99WD40 repeat-containing protein n=1 Tax=Chondrus cr... [more]
A0A6T6AZA7_9RHOD1.310e-8940.59Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZFC4_9RHOD6.900e-8942.86Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YY25_PORPP3.360e-8641.79Protein RAE1 n=1 Tax=Porphyridium purpureum TaxID=... [more]
M2XRG4_GALSU1.750e-8137.01Uncharacterized protein n=2 Tax=Galdieria sulphura... [more]
A0A1X6PDL1_PORUM2.130e-7939.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3IGJ6_9FLOR3.180e-7940.00Protein RAE1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QAP6_CHOCR5.070e-7838.90WD40 repeat-containing protein n=1 Tax=Chondrus cr... [more]
A0A090M6J9_OSTTA1.310e-7338.21WD40/YVTN repeat-like-containing domain n=2 Tax=Os... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 538..577
e-value: 8.8E-4
score: 28.6
coord: 362..401
e-value: 12.0
score: 10.3
coord: 314..356
e-value: 7.3
score: 11.5
coord: 403..442
e-value: 29.0
score: 7.8
coord: 582..635
e-value: 370.0
score: 0.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 546..577
e-value: 0.051
score: 14.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 545..586
score: 10.809215
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 300..645
e-value: 3.5E-71
score: 242.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 641..686
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 672..686
NoneNo IPR availablePANTHERPTHR10971MRNA EXPORT FACTOR AND BUB3coord: 310..638
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..686
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 545..577
score: 9.045603
NoneNo IPR availableSUPERFAMILY117289Nucleoporin domaincoord: 323..617
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
IPR037631mRNA export factor Gle2/RAE1PANTHERPTHR10971:SF11MRNA EXPORT FACTORcoord: 310..638

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2393882..2396710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5555.t1Gchil5555.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2393882..2396710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5555.t1 ID=Gchil5555.t1|Name=Gchil5555.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=687bp
MPATTSPVLCASETQSYDEADSKIEEQPLHLLRFVLRLLLRLCFPFTMFM
QRRSITLLSTVLTYATPNGKRQRQRISSFVARERNSCEGGAFIGDSFESR
ASGLVESVCSLCTPQKMGKVQKTMSCLLEPIQRVFSVVTDESHDGNESHT
EYDLIVVQSTLSQCVSRSDMCIIPLDDHSMSLCSSKGKRRGKFWAVRMVI
WLWIMAFSWCSVVVRCFRGVFGGRQKAIENQLPILLVAPARRPPQRSPPF
PARRALRTPVVASQPAFADQPAFAGKPAFVGKPAFAGQAAVAGQAAAAEQ
PAVMSPFVSNAPANPNNGYLLPDPPDDTISRLRFSSIISPCLLAASSWNG
TARVWKVDPSVGNATAVSLKTDNAPILDLSWLQEGGHLIYAGASRIAHRW
DLASESIQPVAIHDASIKCTHDIKCINSFATAAWDRSLRYWDIRSPTGTP
LLNVPLSDRAYAMDARGPLLVLALAERKIAIYDVRKPSELFVERYTQLKY
QTRCVTTWPNTMGYNVGGVEGKVSVEFVQDSKSKQNYSFFCHKDKQGHMN
AVNAIRFHYKSGAFCTAGSDGMLHFWDKDRRDRASMRRFQNMGQAICDMD
FSPDGSMYAYAVGYDWMQGSAGRNNTESTYVVLHSLEDDELQLSKGGGSG
GGGGGGGGNGGSGGGGHGGSRGRGRGGRRRGGGGRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037631Gle2/RAE1