Gchil5504.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5504.t1
Unique NameGchil5504.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length223
Homology
BLAST of Gchil5504.t1 vs. uniprot
Match: A0A2V3IER7_9FLOR (EamA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IER7_9FLOR)

HSP 1 Score: 268 bits (685), Expect = 8.160e-86
Identity = 141/219 (64.38%), Postives = 176/219 (80.37%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSFSVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVANM--FIGATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAWPLGERFGPRGIIGASLILGATAIAGTSGKKK 220
            L+HTTA+RGAFL+QMSTIIVPIAA+L GME R+  +V+ A +VS+FGVALLTLDNVS +FS LGDG+ML  A ++T++ILR+K H+  A  GPLVPAKV+GQT FA +YF +S L  P + + V  +  F GATP+L+ ANV +VLW G+ I W+STVLQ++GQ LV ASE VIIFTS PLWA++ AWPLGERFGPRGIIGA+LILGATA+AG +G  K
Sbjct:  170 LKHTTAARGAFLSQMSTIIVPIAAFLCGMEARIPRAVLLACVVSVFGVALLTLDNVSSTFSWLGDGMMLLVAFMATVYILRSKQHSSKAHAGPLVPAKVIGQTFFALLYFSLSLLMMPGSVRGVGAVTWFTGATPILVAANVMLVLWAGVCICWLSTVLQMRGQSLVSASEAVIIFTSTPLWAALMAWPLGERFGPRGIIGAALILGATAVAGRAGSDK 388          
BLAST of Gchil5504.t1 vs. uniprot
Match: A0A2V3J448_9FLOR (Putative transporter n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J448_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 6.150e-29
Identity = 85/232 (36.64%), Postives = 129/232 (55.60%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSFSV-----LGDGIMLFTALLSTMFILRTKVHTKIAEKGP-LVPAKVLGQTTFAAVYFVVSSLF-------APCASKNVANMFIGATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAW-PLGERFGPRGIIGASLILGATAIAGTSGKKKD 221
            LR+T ASR AFL QMST++VP+AA    +EK L P V   +  ++ GV LLTL     + +      LGD + + +A++ T+++LRT  H +  +K   LV  KV  Q   + ++    + F       A  A+   A   +  TP  +  N+ +VLW G+ +S  ++ LQ KGQ+ VPASE  ++F + PLWAS+ A   LGER    G+ GA++I+    I+ T GKK+ 
Sbjct:  168 LRYTDASRAAFLQQMSTVLVPLAAAALRIEK-LTPQVTMGAACALAGVGLLTLTAAPAAAAAATLRPLGDLLEVLSAVILTVYMLRTSYHARNTKKSSALVAIKVCSQAALSFIWLGAQTAFQSGSTVSAAAATSVAAAAPVLWTPTAVFLNLMIVLWAGVLVSAAASWLQTKGQQAVPASEAAVLFAAQPLWASVVATLMLGERLTSLGMAGAAMIVSGAVISST-GKKES 397          
BLAST of Gchil5504.t1 vs. uniprot
Match: A0A7S0ZJN1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJN1_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 3.760e-25
Identity = 79/220 (35.91%), Postives = 125/220 (56.82%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSFS-VLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVANMFIGATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWAS-IWAWPLGERFGPRGIIGASLILGATAIAGTSGKKKD 221
            L  T+A R AFLNQ+ T++VP+     G EK +       S+++I GVALL+ D+   + S   GD   + +AL  +++++R        +   LV  K+  Q   +  + VV++       ++++N     +   L+A + ++LW GIF S +S V+Q  GQK  PASET +I ++ PLWAS + A  L ERFGP+GI+G +LIL ATA++    +KK 
Sbjct:  261 LETTSAGRAAFLNQLQTVMVPLICVALGQEK-ITKLTAACSVLAITGVALLSGDSSPTTVSSTAGDAWQIASALFFSLYVIRVGTLAGRYKTPFLVGMKIFVQMILSVGWGVVANWDR---LQHLSNFEYNLSQHELIATIGVILWTGIFCSAVSAVVQTTGQKGTPASETALILSTQPLWASALAAIFLSERFGPKGILGGALILSATALSARFKEKKQ 476          
BLAST of Gchil5504.t1 vs. uniprot
Match: A0A1X6NQU0_PORUM (EamA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQU0_PORUM)

HSP 1 Score: 107 bits (268), Expect = 1.900e-23
Identity = 76/231 (32.90%), Postives = 120/231 (51.95%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSFSVL-GDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVAN------------MFIGATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWAS-IWAWPLGERFGPRGIIGASLILGATAIAGTSGKKK 220
            L  T+ASR AFLNQ+ T++VPI A   G++   N + + +S +++ GV LL+LD    + S L GDG+ + +A   + +ILR   +       PLV  K++ Q   +  +   S+  +                     +  G +   +  N  +V+W G+F+S +S  +Q KGQ  V  S+  +IF + PL+A+ + A  LGE FGP+GI G  LILGAT ++   G  K
Sbjct:  299 LEQTSASRAAFLNQLQTVVVPILAGALGLQAISNRTWV-SSAIAVAGVGLLSLDKSHGAVSSLTGDGLEVLSAFFFSAYILRLGKYASTVRAPPLVATKIMVQAILSICWVTASTALSAXXXXXXXXXXXXXXXXIGGVLGTGWSTADVAINFGVVIWTGLFVSALSGYIQTKGQSAVKPSDAAVIFATQPLFAAALSALILGEGFGPKGITGGLLILGATIVSSLEGGPK 528          
BLAST of Gchil5504.t1 vs. uniprot
Match: R7QC72_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC72_CHOCR)

HSP 1 Score: 103 bits (257), Expect = 3.680e-22
Identity = 79/213 (37.09%), Postives = 119/213 (55.87%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLD--NVSVSFSVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFA---AVYFVVSSLF--AP---CASKNVANMFIGATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWAS-IWAWPLGERFGPRGIIGASL 205
            L+ T+ASR AFL Q+ T+IVP+ A +FG++K + P    +S++++ GVALL+ D  + +VS S  GD + + +A   + +I+R   +       PLV  K+  Q   +   A+   +  LF   P        VA   +GA     + N  +V+W G+F S +S   Q KGQ+ VPASE V+IF + PLWAS + A  LGE FG +G  G +L
Sbjct:  229 LQQTSASRAAFLVQLQTVIVPVLAGVFGLDK-ITPKTWLSSLIAVGGVALLSSDKGHGTVS-SFTGDALEVLSAFFFSTYIIRLSKYCNEIPANPLVAMKIAVQAVLSIGWALSAEIGILFNHGPNDLSKGDEVAAWTLGAV----LVNAGVVVWTGLFSSALSGWAQTKGQQGVPASEAVVIFATQPLWASGVAAIILGESFGAKGFAGGAL 435          
BLAST of Gchil5504.t1 vs. uniprot
Match: A0A7S1T8V9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T8V9_9RHOD)

HSP 1 Score: 103 bits (256), Expect = 3.690e-22
Identity = 82/223 (36.77%), Postives = 125/223 (56.05%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSFSVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVANMFIGA-TPMLLMANVAMV---LWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAWPL-GERFGPRGIIGASLILGATAIAGTSGKKKD 221
            L+ T ASR AFLNQM T+IVP+   + G+E R+  S   ++ +++ GVA+L+      S+SV+GD   L +AL  ++++LR   +    +   LV AKV+ Q T + V +++ ++       +    F  A  P  +   V +V   +W G+  S +S +LQ   Q+ + ASET +I +S PLWAS +A  L GE    RGIIG   IL AT I+ + GKK D
Sbjct:  197 LKATQASRAAFLNQMQTVIVPVLGAILGIE-RVTMSGWASAGLAVIGVAILSSAGEPGSYSVVGDTFELVSALFFSVYVLRVGKYAATCDPRNLVGAKVVIQATLS-VGWILWNITQNGTVNHPVEFFESADNPWSVYEAVVIVGTIVWNGLMTSALSGLLQTTAQRYIKASETALILSSQPLWASAFAAGLLGEHLSFRGIIGGLAILLATVIS-SFGKKSD 416          
BLAST of Gchil5504.t1 vs. uniprot
Match: A0A7S2ZDY3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDY3_9RHOD)

HSP 1 Score: 97.4 bits (241), Expect = 4.690e-20
Identity = 76/208 (36.54%), Postives = 113/208 (54.33%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDN-VSVSFSVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVANMFIGATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAWPL-GERFGPRGIIGASLILGA 209
            L+   A R AFLNQM T+IVPIA    G+EK+L+   + +S +++FGVA+L  DN   V  S+ GD + L +AL  +++ILR   ++K  +   LV  KV+ Q   A V+   S  FA    +   + +       L+A  A++ W G+  S +S  LQ   QK+V  S+  +IF S PL A+  +W L GE    +  IG   I+GA
Sbjct:  197 LQSVGAGRAAFLNQMQTVIVPIAGLALGIEKKLSFRTLASSFIAVFGVAILAADNNPEVVSSLKGDILELTSALFFSLYILRLTSYSKRTKLPRLVGGKVIVQAALAWVWTFQS--FATL--QTTIHFYPDGGLHDLLAWAAVIAWTGLMSSALSGWLQTAAQKVVRPSDAAVIFASQPLVAAALSWILLGENLDLQAGIGGLFIVGA 400          
BLAST of Gchil5504.t1 vs. uniprot
Match: R1DXE7_EMIHU (EamA domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DXE7_EMIHU)

HSP 1 Score: 85.5 bits (210), Expect = 6.580e-16
Identity = 66/212 (31.13%), Postives = 106/212 (50.00%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSFSVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVANMFI-GATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAWP-LGERFGPRGIIGASLILGATAIA 213
            L  T+A  GAFL Q++T++VP+A    G+   + P +  A   ++ G+A+ T D    + S+ GD   +  AL   ++ LR  V  K      L+  KV  Q   A           P  +   A  F+   TP  L+A   +VLW GI ++ ++  LQV GQ+ V  +   +++ S PLWA++ +   LGE  GP+G++G +  L A  +A
Sbjct:  160 LSLTSADHGAFLIQLTTLLVPVAQAFQGVP--IPPRIWAAVGTALVGLAIFTADPSDAAASLSGDASCVAAALCYALYDLRLFVWGKRVTPLRLIQNKVAAQAALAVTA-------VPLLAYADARQFVESVTPSDLVALAPLVLWSGIVVNGVAPFLQVGGQQAVGPARAQVVYASGPLWAALLSLAVLGETIGPQGLLGGAAFLAAVLLA 362          
BLAST of Gchil5504.t1 vs. uniprot
Match: A0A7S3W097_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W097_EMIHU)

HSP 1 Score: 81.3 bits (199), Expect = 2.200e-15
Identity = 63/201 (31.34%), Postives = 101/201 (50.25%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSFSVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVANMFI-GATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAWP-LGERFGPRGIIG 202
            L  T+A  GAFL Q++T++VP+A    G+   + P +  A   ++ G+A+ T D    + S+ GD   +  AL   ++ LR  V  K      L+  KV  Q   A           P  +   A  F+   TP  L+A   +VLW GI ++ ++  LQV GQ+ V  +   +++ S PLWA++ +   LGE  GP+G++G
Sbjct:    9 LSLTSADHGAFLIQLTTLLVPVAQAFQGVP--IPPRIWAAVGTALVGLAIFTADPSDAAASLTGDASCVAAALCYALYDLRLFVWGKRVTPLRLIQNKVAAQAALAVTA-------VPLLAYADARQFVESVTPSDLVALAPLVLWSGIVVNGVAPFLQVGGQQAVGPARAQVVYASGPLWAALLSLAVLGETIGPQGLLG 200          
BLAST of Gchil5504.t1 vs. uniprot
Match: K0RNQ7_THAOC (EamA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RNQ7_THAOC)

HSP 1 Score: 79.3 bits (194), Expect = 1.170e-13
Identity = 64/215 (29.77%), Postives = 108/215 (50.23%), Query Frame = 0
Query:    4 LRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFGVALLTLDNVSVSF-SVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPAKVLGQTTFAAVYFVVSSLFAPCASKNVANMFIGATPMLLMANVAMVLWGGIFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAWP-LGERFGPRGIIGASLILGATAIAGTS 216
            L  T++  GAFL Q++T+IVP    + G+   + P +  A  +++ GV + + D   V   SV GD +    A+    + LR     KI     L+ AK++ Q+  +        L    + +       GAT   ++   ++V+W G+ ++ ++  LQV GQ+ V  S   I++ S PLW+S+ ++  L E FG  G+IG SL L A  +A T+
Sbjct:  192 LSETSSDHGAFLIQLTTLIVPTIQGIQGVP--IPPRIWGAIGLALGGVFIFSQDPSQVDCASVQGDVLCALAAVFYATYDLRLFKWGKIVNTSELITAKMVTQSALSL------GLLVALSGEETRAYIAGATSDDVLLAASVVMWSGLAVNCVAPYLQVSGQQAVGPSRAQILYASQPLWSSVLSFVFLHEAFGTEGLIGGSLFLVAMFLAATA 398          
The following BLAST results are available for this feature:
BLAST of Gchil5504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IER7_9FLOR8.160e-8664.38EamA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3J448_9FLOR6.150e-2936.64Putative transporter n=1 Tax=Gracilariopsis chorda... [more]
A0A7S0ZJN1_9RHOD3.760e-2535.91Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NQU0_PORUM1.900e-2332.90EamA domain-containing protein n=1 Tax=Porphyra um... [more]
R7QC72_CHOCR3.680e-2237.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1T8V9_9RHOD3.690e-2236.77Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZDY3_9RHOD4.690e-2036.54Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R1DXE7_EMIHU6.580e-1631.13EamA domain-containing protein n=2 Tax=Emiliania h... [more]
A0A7S3W097_EMIHU2.200e-1531.34Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
K0RNQ7_THAOC1.170e-1329.77EamA domain-containing protein n=1 Tax=Thalassiosi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 107..212
e-value: 1.2E-6
score: 28.8
NoneNo IPR availablePANTHERPTHR42920OS03G0707200 PROTEIN-RELATEDcoord: 3..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 190..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 139..218
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 2..58
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 199..217
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
NoneNo IPR availableTMHMMTMhelixcoord: 39..56
NoneNo IPR availableTMHMMTMhelixcoord: 61..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2190643..2191311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5504.t1Gchil5504.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2190643..2191311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5504.t1 ID=Gchil5504.t1|Name=Gchil5504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=223bp
MTALRHTTASRGAFLNQMSTIIVPIAAYLFGMEKRLNPSVIFASIVSIFG
VALLTLDNVSVSFSVLGDGIMLFTALLSTMFILRTKVHTKIAEKGPLVPA
KVLGQTTFAAVYFVVSSLFAPCASKNVANMFIGATPMLLMANVAMVLWGG
IFISWMSTVLQVKGQKLVPASETVIIFTSMPLWASIWAWPLGERFGPRGI
IGASLILGATAIAGTSGKKKDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom