Gchil5487.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5487.t1
Unique NameGchil5487.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length277
Homology
BLAST of Gchil5487.t1 vs. uniprot
Match: A0A2V3J6H7_9FLOR (Cyclin-D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6H7_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 2.660e-90
Identity = 141/277 (50.90%), Postives = 198/277 (71.48%), Query Frame = 0
Query:    1 MWQLIDIHRTQARDRELRLCRSVIDAKLRQERFKHWKGGPNYETFKSLGGQVGRTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNAQSIASTCIRLAVKIDDVGGDSMIVPLFKDSL-TLHSELFVLSSLEWQMDVPTVHLFIRMFAELVWLPPASREQAVEYAKHISLYFDCQEYNPSSLALVCILLLEQDSLLPLPCKALALGIARDGKVNAEELSEGFKRFRHVCFS---SNGAEHNDDHYQR-NGVDSSSTTAYPDSSSTQSS 272
            MW+ +D  R Q R  E+++  S++ + L QE+  HWK  PN+E F S+GGQVGR+ML SW+ D+C+   LKPST  LAVNYLDRM+S+   +  ++QS A TCIRLA+K D VGG+ M VP F +++ +   ELFVL  L W+M+VPTVHLF+++F++ VWLPP SR++A EY K I +Y + Q +NPS+LA++CI LL+QD LLPLPC+AL+  + R+GKV+ +++S+GFKRFRHVCFS   S+  +  DD  +  +       TAYP+S S+QSS
Sbjct:    1 MWRKVDEEREQTRSSEVQIRNSILASTLSQEKLNHWKVEPNHEAFLSIGGQVGRSMLISWVVDECTKQKLKPSTICLAVNYLDRMISKGCVTLDSSQSFACTCIRLAIKFDGVGGNGMHVPTFGEAVPSAKMELFVLDHLNWKMNVPTVHLFLKLFSDEVWLPPPSRDRAFEYVKRIFVYVESQMFNPSALAMICIFLLQQDDLLPLPCEALSTALVREGKVDLDQVSDGFKRFRHVCFSPYCSHIQDRADDRTRNEDXXXXXXATAYPESMSSQSS 277          
BLAST of Gchil5487.t1 vs. uniprot
Match: C1E2W3_MICCC (Cyclin N-terminal domain-containing protein n=3 Tax=Micromonas TaxID=38832 RepID=C1E2W3_MICCC)

HSP 1 Score: 62.4 bits (150), Expect = 2.010e-7
Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 0
Query:   22 SVIDAKLRQERFKH-WKGGPNYETFKSLGGQVGRTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNAQSIASTCIRLAVKIDDVGGDSMIVP-LFKDSLTLHS-------ELFVLSSLEWQM-DVPTVHLFIRMFA 156
             V++    +ER K  W+  PN            RT L  W+ + C+     P+TA LAV Y+DR+LS+      + Q +A  C+ +AVK ++V  D   +P L K +  ++S       EL VL  LEW +  V + H    +FA
Sbjct:  132 EVLETLRERERTKQRWRLDPNTARHMKY-----RTTLIEWILEVCADFGFGPTTADLAVQYMDRVLSKVNVPKTSLQLVAMCCLEVAVKYEEVEQDVPSLPKLRKCASNVYSCEIIKKMELAVLIELEWDLATVVSAHFLESLFA 271          
BLAST of Gchil5487.t1 vs. uniprot
Match: A4S9Z1_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S9Z1_OSTLU)

HSP 1 Score: 60.1 bits (144), Expect = 8.420e-7
Identity = 38/149 (25.50%), Postives = 67/149 (44.97%), Query Frame = 0
Query:   19 LCRSVIDAKLRQERFKHWKGGPNYETFKSLGGQVGRTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNAQSIASTCIRLAVKIDDVGGDSMIVP--------LFKDSLTLHSELFVLSSLEWQMDVPTVHLFIRMFAELV 159
            LC  V    LR+ER  H   G       +      R  L  W+ D C+     P+TA +A+ Y+DR+LS+T     +   +A  C+++AVK +++      +         ++   +    EL VL  L+W++ + T   F+  F  ++
Sbjct:   19 LCADVARELLRRERADH---GAFVLDGATAHHAAYRAQLVEWILDVCAGERYGPTTADVAIGYMDRVLSKTVVPKTSLHLVALCCLQIAVKYEEIEERVPTMAKLRAWTSNMYSPDIIQKMELAVLIELKWELGILTPAHFLESFLTMM 164          
BLAST of Gchil5487.t1 vs. uniprot
Match: A0A371DQE6_9APHY (Cyclin N-terminal domain-containing protein n=2 Tax=Polyporus TaxID=5637 RepID=A0A371DQE6_9APHY)

HSP 1 Score: 60.1 bits (144), Expect = 1.360e-6
Identity = 39/125 (31.20%), Postives = 63/125 (50.40%), Query Frame = 0
Query:   40 PNY-ETFKSLGGQVGRTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNAQSIASTCIRLAVKIDDVGGDSMIVPLF------KDSLTLHSELFVLSSLEWQMDVPTVHLFIRMFAE 157
            P+Y E  K L  ++ R +L  WL    S   L P T FLAVN +DR LS+   S    Q +  TC+ +A K++++   S    L+       +S  L +E +VL +++W +  P    F+R  ++
Sbjct:  335 PHYMENQKDLAWKM-RGILIDWLIQVHSRFRLLPETLFLAVNIIDRFLSKRVVSLAKLQLVGITCMFIAAKVEEIIAPSASNFLYCAEESYTESEILQAERYVLKTIDWNLSYPNPIHFLRRISK 458          
BLAST of Gchil5487.t1 vs. uniprot
Match: UPI001D074D70 (G1/S-specific cyclin-E n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D074D70)

HSP 1 Score: 58.2 bits (139), Expect = 4.900e-6
Identity = 37/143 (25.87%), Postives = 68/143 (47.55%), Query Frame = 0
Query:   54 RTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNA-QSIASTCIRLAVKIDDVGGDSMIVPLF------KDSLTLHSELFVLSSLEWQMDVPTVHLFIRMFAELVWLPPASREQAVEYAKHISLYFDCQEYNPSS 189
            R +L  WL + C    L   T FLA++Y+DR LS+ +  P    Q +  TC+ LA K++++    +    +       D   L  E+ VL  L W++   TV+ ++ ++ ++      +  Q+  +  H +    C+E N +S
Sbjct:  119 RAILLDWLSEVCEVYRLHRETYFLAIDYIDRYLSKRHDVPKTQLQLLGITCLFLAAKVEEIYPPKLAEFSYVTDGACTDDNILTKEVIVLRELNWELTPMTVNYWLCLYMQIYI--HKTEIQSTHHGNHETSMVRCKEQNENS 259          
BLAST of Gchil5487.t1 vs. uniprot
Match: A0A1B0D6Z0_PHLPP (Cyclin N-terminal domain-containing protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D6Z0_PHLPP)

HSP 1 Score: 58.2 bits (139), Expect = 5.560e-6
Identity = 39/127 (30.71%), Postives = 63/127 (49.61%), Query Frame = 0
Query:   54 RTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSR-TYTSPMNAQSIASTCIRLAVKIDDVG----GDSMIVP--LFKDSLTLHSELFVLSSLEWQMDVPTVHLFIRMFAEL-------VWLPPASR 166
            R +L  WL + C  + LK  T  LA++Y+DR LSR T  S    Q +  TC+ +A K++++     G+   V      +S  L  EL +L SL+W M   TV  ++ ++ ++       +W  P  R
Sbjct:  180 RAILLDWLIEVCDVHKLKRETYSLAMDYIDRYLSRNTAVSKTRLQLVGVTCLFVAAKVEEIYPPKIGEFAYVTDGACTESDILQQELLLLQSLDWNMSTVTVMGWLTIYMQIHVTDPTKLWKKPVIR 306          
BLAST of Gchil5487.t1 vs. uniprot
Match: A0A5C2S0W1_9APHY (Cyclin N-terminal domain-containing protein n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2S0W1_9APHY)

HSP 1 Score: 58.2 bits (139), Expect = 5.810e-6
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:   40 PNY-ETFKSLGGQVGRTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNAQSIASTCIRLAVKIDDVGGDSMIVPLF--KDSLT----LHSELFVLSSLEWQMDVPTVHLFIRMFAE 157
            P Y E+ + L  ++ R +L  WL    S   L P T FLAVN +DR L++   S    Q +  TC+ +A K+++V   S    L+  ++S T    L +E +VL++++W +  P    F+R  ++
Sbjct:  315 PRYMESQRDLAWKM-RGILVDWLIQVHSRFRLLPETLFLAVNIIDRFLTKRMVSLAKLQLVGITCMFIAAKVEEVIAPSASNFLYCAEESYTETEILQAERYVLNTIDWNLSYPNPIHFLRRISK 438          
BLAST of Gchil5487.t1 vs. uniprot
Match: A0A6P5X6T4_DURZI (putative cyclin-D6-1 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5X6T4_DURZI)

HSP 1 Score: 57.4 bits (137), Expect = 6.830e-6
Identity = 55/177 (31.07%), Postives = 77/177 (43.50%), Query Frame = 0
Query:   67 SNHLKPSTAFLAVNYLDRMLSRTYT---SPMNAQSIASTCIRLAVKIDDVGGDSMIVP-----LFKDSLTLHSELFVLSSLEWQMDVPTVHLFIRMFAELVWL--PP---ASREQAVEYAKHISLYFDCQEYNPSSLALVCILLLEQDSLLPLPCKALALGIARDGKVNAEELSEGF 230
            S +L P T +LAVNY+DR +SR      +P   + +   CI LA K+ ++   S         +F        EL +L +L W+M   T   FIR F  L+ L  PP   A +E+A           +  E+ PS +A    LLL    L PL   +    I     VN E L + F
Sbjct:   64 SCNLDPFTPYLAVNYMDRFISRQEIPQGNPWVLRLLVIACISLAAKMKEIHFSSSNFQREEGFIFDAPAIQRMELLILDALNWRMRSITPFSFIRFFISLLELKDPPLTQALKERATNIILQARNEINLLEFKPSIIA-ASALLLASHELFPLQFPSFETSILSCEYVNKENLLKCF 239          
BLAST of Gchil5487.t1 vs. uniprot
Match: C1N999_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N999_MICPC)

HSP 1 Score: 57.4 bits (137), Expect = 9.130e-6
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 0
Query:   54 RTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNAQSIASTCIRLAVKIDDVGGDSMIVP-LFKDSLTLHS-------ELFVLSSLEWQMDVPTV 148
            RT L  W+ + C+     P+TA LAV Y+DR+LS+      + Q +A  C+ +AVK +++  D   +P L K +  ++S       EL VL  L+W  D+ T+
Sbjct:  153 RTTLIEWILEVCADLGFGPTTADLAVRYMDRVLSKVNVPKTSLQLVAMCCLEVAVKFEEIENDVPSLPKLRKCASNVYSVEIIKKMELAVLIELDW--DLATI 253          
The following BLAST results are available for this feature:
BLAST of Gchil5487.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3J6H7_9FLOR2.660e-9050.90Cyclin-D n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
C1E2W3_MICCC2.010e-731.72Cyclin N-terminal domain-containing protein n=3 Ta... [more]
A4S9Z1_OSTLU8.420e-725.50Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A371DQE6_9APHY1.360e-631.20Cyclin N-terminal domain-containing protein n=2 Ta... [more]
UPI001D074D704.900e-625.87G1/S-specific cyclin-E n=1 Tax=Chrysoperla carnea ... [more]
A0A1B0D6Z0_PHLPP5.560e-630.71Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A5C2S0W1_9APHY5.810e-631.20Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A6P5X6T4_DURZI6.830e-631.07putative cyclin-D6-1 n=1 Tax=Durio zibethinus TaxI... [more]
C1N999_MICPC9.130e-633.98Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 53..143
e-value: 6.0E-14
score: 51.9
IPR006671Cyclin, N-terminalPROSITEPS00292CYCLINScoord: 54..85
NoneNo IPR availableGENE3D1.10.472.10coord: 54..144
e-value: 1.7E-20
score: 75.3
NoneNo IPR availableGENE3D1.10.472.10coord: 145..197
e-value: 1.7E-20
score: 75.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..276
IPR039361CyclinPANTHERPTHR10177CYCLINScoord: 54..215
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 53..113
e-value: 1.41914E-8
score: 49.1593
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 52..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2105253..2106145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5487.t1Gchil5487.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2105253..2106145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5487.t1 ID=Gchil5487.t1|Name=Gchil5487.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=277bp
MWQLIDIHRTQARDRELRLCRSVIDAKLRQERFKHWKGGPNYETFKSLGG
QVGRTMLYSWLFDKCSSNHLKPSTAFLAVNYLDRMLSRTYTSPMNAQSIA
STCIRLAVKIDDVGGDSMIVPLFKDSLTLHSELFVLSSLEWQMDVPTVHL
FIRMFAELVWLPPASREQAVEYAKHISLYFDCQEYNPSSLALVCILLLEQ
DSLLPLPCKALALGIARDGKVNAEELSEGFKRFRHVCFSSNGAEHNDDHY
QRNGVDSSSTTAYPDSSSTQSSVCAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR039361Cyclin
IPR013763Cyclin-like
IPR036915Cyclin-like_sf