Gchil5375.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
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Overview
Homology
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A2V3J6B5_9FLOR (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6B5_9FLOR) HSP 1 Score: 327 bits (837), Expect = 3.090e-111 Identity = 168/207 (81.16%), Postives = 190/207 (91.79%), Query Frame = 0
Query: 33 MAFKNEGSNVPIRDRARDELRECRSLISSLFVAQADMLKSVPTGNEEGQRVT---RDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLGAMDVEEDKGGESSEKAR 236
M N SNVPIRDRARDELRECRSLISSLFVAQA++LKS+ T +++G+R+ RD T ESVQ+MEKLV QVKSFH+V+EQVL+HQRL+GIIE+LRKANSVEDAKI+HLGANLRAAESVLQN+LDEA+PRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDP+QPLGN LPPAPTEEMMRAGKLGA+++EE+KG E SEKAR
Sbjct: 1 MVQHNHASNVPIRDRARDELRECRSLISSLFVAQANLLKSISTASDDGKRIKDTKRDPTQESVQIMEKLVTQVKSFHSVMEQVLEHQRLHGIIEELRKANSVEDAKIAHLGANLRAAESVLQNSLDEAKPRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDPSQPLGNFLPPAPTEEMMRAGKLGAVEMEEEKGAELSEKAR 207
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A7S0BGG5_9RHOD (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGG5_9RHOD) HSP 1 Score: 118 bits (295), Expect = 1.470e-29 Identity = 68/183 (37.16%), Postives = 108/183 (59.02%), Query Frame = 0
Query: 37 NEGSNVPIRDRARDELRECRSLISSLFVAQADMLKSVPTGNEEGQRVTRDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLG 219
++ S +P RDRAR ELRE SL+ L + D+ S G G+ V + ++ ++L+ + K +++++++ HQ +N +IE +R + E+ K+ LG LR AE LQ + R+AA + A K ++V +++ +KI +S +AP W PT+PLGN LPPAP EEMMR+G LG
Sbjct: 2 DDSSAIPARDRARVELREFESLVR-LLIQYFDLSAS---GRMPGEDVLQPD-----RIAQELIERQKVLRSIVDELVQHQNMNKLIEKVRASLQREEQKLVQLGGTLRGAELCLQGPDIDHEARIAALEGAKK--VNVKDIVELAAKIGSSYAAPPNWTPTEPLGNHLPPAPPEEMMRSGHLG 173
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A7S2ZT46_9RHOD (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT46_9RHOD) HSP 1 Score: 117 bits (293), Expect = 1.720e-28 Identity = 70/190 (36.84%), Postives = 109/190 (57.37%), Query Frame = 0
Query: 38 EGSNVPIRDRARDELRECRSLISSLFVAQADMLKSVPTGNEEGQRVTRDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLGAMDVEEDK 227
+ S +P RDRAR ELRE SL+ L + D+ S G+ + D ++ ++L+ + K ++ +++ HQ +N +IE +R + E+ K+ LG LR AE LQ + R+AA + A K ++V +++ +KI +S SAP W PT+PLGN LPPAPTEEMMR+G LG + ++ K
Sbjct: 3 DSSAIPARDRARVELREIESLVR-LLIQYFDLSAS-------GRMPSEDVLQPD-RIAQELIERQKVLRSIAGELVQHQNMNKLIEKVRASLQREEQKLVQLGGTLREAELRLQGPDMDHEARIAALEGAKK--VNVKDIVELAAKIGSSYSAPPNWTPTEPLGNRLPPAPTEEMMRSGHLGKVRMDPPK 181
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A7S2ZU48_9RHOD (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZU48_9RHOD) HSP 1 Score: 99.4 bits (246), Expect = 1.250e-22 Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 0
Query: 93 QVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLG 219
++ ++L+ + K ++ +++ HQ +N +IE +R + E+ K+ LG LR AE LQ + R+AA + A K ++V +++ +KI +S SAP W PT+PLGN LPPAPTEEMMR+G LG
Sbjct: 20 RIAQELIERQKVLRSIAGELVQHQNMNKLIEKVRASLQREEQKLVQLGGTLREAELRLQGPDMDHEARIAALEGAKK--VNVKDIVELAAKIGSSYSAPPNWTPTEPLGNRLPPAPTEEMMRSGHLG 144
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A1X6P309_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P309_PORUM) HSP 1 Score: 103 bits (257), Expect = 9.500e-22 Identity = 63/188 (33.51%), Postives = 95/188 (50.53%), Query Frame = 0
Query: 34 AFKNEGSNVPIRDRARDELRECRSLISSLFVAQADMLKSVPTGNEEGQRVTRDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISASLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLGAM 221
A ++ ++VP+RDRAR LRECRSL++ LF A ++ G R++ + + QVME +++ +HQR I L Q ALD ARPRL A + RP+ V +I+ G++++ +++AP GW P QPLG S+PPA T+E M G+L A+
Sbjct: 94 AARDFDASVPVRDRARTVLRECRSLVARLFEAVDALV---------GGRMSSEAVMQPEQVMEAXXXXXXXXXXXXDELTEHQRTAATIARLTAXXXXXXXXXXXXXXXXXXXXXXXQGALDAARPRLVAAAASAARPLPVPALIAAGARLAPAIAAPPGWAPPQPLGGSVPPAVTDEAMWGGRLAAL 272
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A1B6DGF2_9HEMI (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DGF2_9HEMI) HSP 1 Score: 72.8 bits (177), Expect = 1.040e-11 Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 90 ESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISAS--LSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLGAMD 222
E + + E LV++ ++ + ++N ++ L+ +D I L L+ AE VL A+ +AR +L A RANKRP+ +E+I + +ISAS + APL W P G+ P PT+ MR G LG M+
Sbjct: 44 EQLHLTELLVSKDNELKEMLNLASEQAKINQKMDILKAEVEQQDQDIQQLQRQLKEAEQVLATAIFQARQKLQAINRANKRPVPSEELIKFAHRISASNAVCAPLTWQP----GDPRRPYPTDIEMRLGFLGRMN 174
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A423SZI8_PENVA (Mediator of RNA polymerase II transcription subunit 4 n=6 Tax=Penaeus TaxID=133894 RepID=A0A423SZI8_PENVA) HSP 1 Score: 66.6 bits (161), Expect = 1.490e-9 Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 0
Query: 57 SLISSLFVAQADMLKSVPTGNEEGQRVTRDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISAS--LSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLG 219
SLI + ++L+ N + R + ++ Q++E L+ + I+ D R+ I+E ++ D I L L A L AL +AR +L + RANKRP++ +E+I Y +IS++ +SAP W G+ P PT+ MRAG LG
Sbjct: 12 SLIDDTELISKELLE-----NSIAPKAQRLSAHDQAQLIELLIHKDTELKETIKLASDQARIAEIMETVQAEVDRHDQMILQLEKQLHDAHHTLSVALYQARQKLQSIARANKRPVNSEELIKYAHRISSTYAVSAPDNWQQ----GDPRRPYPTDLEMRAGYLG 167
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A444SYH5_ARMVU (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Armadillidium TaxID=13346 RepID=A0A444SYH5_ARMVU) HSP 1 Score: 65.5 bits (158), Expect = 3.510e-9 Identity = 44/145 (30.34%), Postives = 74/145 (51.03%), Query Frame = 0
Query: 77 NEEGQRVTRDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISA--SLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLG 219
N + R ++NE Q+++ L+ + + ++ + + GI+E ++ + I L L A L AL +AR +L + RANKRP++ +E+I Y +IS+ S++AP W G+ P PT+ MRAG LG
Sbjct: 27 NSVAPKPQRLSSNEQTQLIQLLLTKDEELKETMKVAGEQAVVAGIMESVQAEVDKHEMMIVQLEKQLYEAAHTLSVALYQARQKLDSISRANKRPVNSEELIKYAHRISSTYSVAAPTNWQQ----GDPRRPYPTDHEMRAGFLG 167
BLAST of Gchil5375.t1 vs. uniprot
Match: A0A8J5KFL0_HOMAM (Mediator of RNA polymerase II transcription subunit 4-like (Fragment) n=5 Tax=Astacidea TaxID=6712 RepID=A0A8J5KFL0_HOMAM) HSP 1 Score: 61.2 bits (147), Expect = 1.070e-7 Identity = 44/145 (30.34%), Postives = 72/145 (49.66%), Query Frame = 0
Query: 77 NEEGQRVTRDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISA--SLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLG 219
N + R ++++ Q++E L+ + I+ D R+ I+E ++ D I L L A L AL +AR ++ + RANKRP++ +E+I Y +IS+ S++AP W G+ P P + MRAG LG
Sbjct: 17 NSIAPKPQRLSSSDLAQLIELLILKDGELKDTIKLANDQARIASIMETVQAEVDKHDQMILQLEKQLHDAHHTLSVALYQARQKMQSIARANKRPVNSEELIKYAHRISSTYSVTAPDTWQQ----GDPRRPYPIDLEMRAGFLG 157
BLAST of Gchil5375.t1 vs. uniprot
Match: UPI001C486B01 (mediator of RNA polymerase II transcription subunit 4-like isoform X1 n=3 Tax=Homarus americanus TaxID=6706 RepID=UPI001C486B01) HSP 1 Score: 61.6 bits (148), Expect = 1.480e-7 Identity = 48/165 (29.09%), Postives = 80/165 (48.48%), Query Frame = 0
Query: 57 SLISSLFVAQADMLKSVPTGNEEGQRVTRDTTNESVQVMEKLVAQVKSFHAVIEQVLDHQRLNGIIEDLRKANSVEDAKISHLGANLRAAESVLQNALDEARPRLAAFKRANKRPIDVDEVISYGSKISA--SLSAPLGWDPTQPLGNSLPPAPTEEMMRAGKLG 219
SLI + ++L+ N + R ++++ Q++E L+ + I+ D R+ I+E ++ D I L L A L AL +AR ++ + RANKRP++ +E+I Y +IS+ S++AP W G+ P P + MRAG LG
Sbjct: 17 SLIDDTELISKELLE-----NSIAPKPQRLSSSDLAQLIELLILKDGELKDTIKLANDQARIASIMETVQAEVDKHDQMILQLEKQLHDAHHTLSVALYQARQKMQSIARANKRPVNSEELIKYAHRISSTYSVTAPDTWQQ----GDPRRPYPIDLEMRAGFLG 172 The following BLAST results are available for this feature:
BLAST of Gchil5375.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil5375.t1 ID=Gchil5375.t1|Name=Gchil5375.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=238bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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