Gchil5373.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5373.t1
Unique NameGchil5373.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length418
Homology
BLAST of Gchil5373.t1 vs. uniprot
Match: R7QN20_CHOCR (GATA-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN20_CHOCR)

HSP 1 Score: 347 bits (889), Expect = 3.050e-112
Identity = 210/436 (48.17%), Postives = 275/436 (63.07%), Query Frame = 0
Query:    1 MGKIADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLFKDDHGNLTAVQRRDAVPFHIPPPSSKKASRKLA----------SPVSQPSSPDLSAKRSAIRKVPSEGAIAPPLGKKPRSRSRRANAGQLPGRYATKTLPDTMPLHYRSPTSSXXXXXXXXXNRSPTHENRV--PLLNFQRLYNVNEPPLSKLIDAHDESMFPDMASLGLDCGPRANNNAVVLPMPVHASCVEQFSFAFSGCGN--SLNIDAPDRREALRGLLSDRTRKVSRTYEATVAAVARLCEQRYRNAKAKNMDAKLSAVDDCRNFVRAFAHEQSCGYGLDDDGLC----SVEQVAHMMCSSNSVGMMLPEKTAHCNAVNYLKALVDSSELDGFAETCMVELLAEDVIAVLAQQGHAQFGKDAGC--RRGEAALRANAVATR 416
            MGKIADP L+L+CVHC +TETPLWRAGPDGPKTLCNACGVRYKKGKL +F+D  GNLTAV++ D +P H+PP + KK+++KL           S  S PSSP   A R  +RKVP+EG     L KKPRSRSRR NAGQLPGRY++K+LPD +   + SP +S          +SP ++  V   L        +++P L    D  DE++FPD++ LG+D G        +LPM    S  EQFSFAF   GN  S+NI  PDR +ALRGL+ DRTRKVS  YE+TV  + RLCE+R   +   N + +   ++DC+N+VR F+ EQ+ G+  + +  C    S+     M     + G MLPEKTA+ +AV  LKAL+DSSEL GFAE CM+ELL EDV A L++   A  GK AG   R  +++  +N++A R
Sbjct:   61 MGKIADPLLKLRCVHCGNTETPLWRAGPDGPKTLCNACGVRYKKGKLTIFRDKDGNLTAVKQEDTLPVHVPP-APKKSNKKLQQHHAPDPPSKSDHSHPSSPSEPAVRRPVRKVPTEGVFTAALAKKPRSRSRRTNAGQLPGRYSSKSLPDDV-AQWHSPLTSPKSFSSSPA-QSPRNDGGVCFQLARGASALKIDDP-LPYHCDPSDEALFPDVSCLGIDSGDDDRTTVKLLPMDADPSSAEQFSFAFGELGNNASVNIGLPDRVKALRGLVLDRTRKVSARYESTVVGLCRLCEERCLRS-CSNGNGQPWTLEDCKNYVRWFSQEQTVGFVANKNSSCNPGISLSDSDEM---DITAGFMLPEKTAYTSAVENLKALMDSSELAGFAEACMIELLCEDVAAALSKGVFA--GKCAGVHFRLAQSSFPSNSIAVR 486          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A2V3J663_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J663_9FLOR)

HSP 1 Score: 325 bits (833), Expect = 8.530e-107
Identity = 177/271 (65.31%), Postives = 200/271 (73.80%), Query Frame = 0
Query:  146 HYRSPTSSXXXXXXXXXNRSPTHENR-VPLLNFQRLYNVNEPPLSKLIDAHDESMFPDMASLGLDCGPRANNNAVVLPMPVHASCVEQFSFAFSGCGNSLNIDAPDRREALRGLLSDRTRKVSRTYEATVAAVARLCEQRYRNAKAKNMDAKLSAVDDCRNFVRAFAHEQSCGYGLDDDGLCSVEQVAHMMCSSNSVGMMLPEKTAHCNAVNYLKALVDSSELDGFAETCMVELLAEDVIAVLAQQGHAQFGKDAGCRRGEAALRANAVAT 415
            H+RSP SS    XXXXX          VP L+  RL+ VNEPPLSK ID   ESMFPDMA LGLDC PRANN  V+LPMP+ AS VEQFSFAFSGC NSL IDAPDRREALRGL+ DRTR+VSR YEATV A+ARLCEQR+  A A+N   KLS VDDCRNFVRAFAHEQS G GL+ DG+   E+    M +   V MMLPE+TAHCNA N  KAL+DSSEL+GFAE CMVELLAEDVIA+LAQQGH  F  +A CR  +A + + A+ T
Sbjct:    3 HFRSPASSPKTTXXXXXXXXXXXXXXXVPPLHVPRLFTVNEPPLSKFIDPEHESMFPDMACLGLDCSPRANNT-VLLPMPIDASSVEQFSFAFSGCSNSLKIDAPDRREALRGLVLDRTRRVSRAYEATVVALARLCEQRHLRATARNTTVKLSCVDDCRNFVRAFAHEQSSGIGLEYDGMDVCEETTQRMSTGMGVAMMLPERTAHCNAANCFKALMDSSELEGFAEACMVELLAEDVIAMLAQQGHTDFELEAACRIADAPMASKAIPT 272          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A6T6AV47_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AV47_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 1.440e-12
Identity = 34/49 (69.39%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    1 MGKIADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLL 49
            M K ++P  RL+C +C+ TETPLWR+GP+GPKTLCNACGVR+KKGKL+L
Sbjct:    1 MAKGSNPE-RLRCSNCNKTETPLWRSGPEGPKTLCNACGVRWKKGKLVL 48          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A6A6NIN6_HEVBR (GATA-type domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6NIN6_HEVBR)

HSP 1 Score: 73.2 bits (178), Expect = 5.000e-12
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    9 LRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLFKDDHGNLTAVQRRDA 65
            L+  C+ CH+T TP WR+GP+GPKTLCNACG+RY+K +  L   D G     +R+ A
Sbjct:   27 LKKSCIDCHTTRTPCWRSGPEGPKTLCNACGIRYRKKRWALLGLDKGRAEKCRRKMA 83          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A1X6P494_PORUM (GATA-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P494_PORUM)

HSP 1 Score: 78.6 bits (192), Expect = 7.210e-12
Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 0
Query:   12 QCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLF 50
            +CVHC +T TPLWR+GPDGPKTLCNACGVR+KKG+L LF
Sbjct:    6 KCVHCSATATPLWRSGPDGPKTLCNACGVRHKKGRLALF 44          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A2V3IMZ4_9FLOR (GATA transcription factor 9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMZ4_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 1.050e-11
Identity = 29/34 (85.29%), Postives = 33/34 (97.06%), Query Frame = 0
Query:   11 LQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKK 44
            ++CVHCH+TETPLWRAGP GPKTLCNACGVR+KK
Sbjct:    1 MRCVHCHTTETPLWRAGPAGPKTLCNACGVRWKK 34          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A835RK71_VANPL (GATA-type domain-containing protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RK71_VANPL)

HSP 1 Score: 74.7 bits (182), Expect = 1.220e-11
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query:   10 RLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLL 48
            R +C HC S ETP WRAGPDGPKTLCNACGVRYK G+L+
Sbjct:  153 RRKCRHCESEETPQWRAGPDGPKTLCNACGVRYKSGRLV 191          
BLAST of Gchil5373.t1 vs. uniprot
Match: UPI001CF9D5B3 (GATA transcription factor 15-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF9D5B3)

HSP 1 Score: 71.6 bits (174), Expect = 1.470e-11
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    9 LRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLFKDDHGNLTAVQRRDAVPF 68
            ++  C+ CH+T TPLWR GP GP++LCNACG+RY+K K  L   D G     +R+++  F
Sbjct:   22 MKKSCIDCHTTTTPLWRGGPAGPRSLCNACGIRYRKTKKALLGLDKGRAEKCKRKNSKDF 81          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A2C9WN50_MANES (GATA-type domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WN50_MANES)

HSP 1 Score: 71.6 bits (174), Expect = 1.750e-11
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    9 LRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLFKDDHGNLTAVQRRDA 65
            L+  C+ CH+T TP WR+GP GPKTLCNACG+RY+K K  L   D G     +R+ A
Sbjct:   27 LKKSCIDCHTTRTPCWRSGPAGPKTLCNACGIRYRKKKRNLLGLDKGRAEKSRRKIA 83          
BLAST of Gchil5373.t1 vs. uniprot
Match: A0A7N0TUP8_KALFE (GATA-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TUP8_KALFE)

HSP 1 Score: 70.9 bits (172), Expect = 2.370e-11
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0
Query:   12 QCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKL 47
            +C HC S +TP WRAGPDGPKTLCNACGVRYK G+L
Sbjct:   79 KCKHCGSEKTPQWRAGPDGPKTLCNACGVRYKSGRL 114          
The following BLAST results are available for this feature:
BLAST of Gchil5373.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QN20_CHOCR3.050e-11248.17GATA-type domain-containing protein n=1 Tax=Chondr... [more]
A0A2V3J663_9FLOR8.530e-10765.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6T6AV47_9RHOD1.440e-1269.39Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A6A6NIN6_HEVBR5.000e-1250.88GATA-type domain-containing protein n=1 Tax=Hevea ... [more]
A0A1X6P494_PORUM7.210e-1279.49GATA-type domain-containing protein n=1 Tax=Porphy... [more]
A0A2V3IMZ4_9FLOR1.050e-1185.29GATA transcription factor 9 n=1 Tax=Gracilariopsis... [more]
A0A835RK71_VANPL1.220e-1176.92GATA-type domain-containing protein n=2 Tax=Vanill... [more]
UPI001CF9D5B31.470e-1146.67GATA transcription factor 15-like n=1 Tax=Mangifer... [more]
A0A2C9WN50_MANES1.750e-1152.63GATA-type domain-containing protein n=1 Tax=Maniho... [more]
A0A7N0TUP8_KALFE2.370e-1177.78GATA-type domain-containing protein n=1 Tax=Kalanc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 7..67
e-value: 2.6E-18
score: 76.8
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 13..46
e-value: 8.4E-18
score: 63.7
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 13..38
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 7..43
score: 13.1779
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 12..44
e-value: 1.68531E-14
score: 65.4718
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 10..93
e-value: 2.8E-16
score: 61.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..169
NoneNo IPR availablePANTHERPTHR45658GATA TRANSCRIPTION FACTORcoord: 12..48
NoneNo IPR availablePANTHERPTHR45658:SF37GATA ZINC FINGER FAMILY PROTEIN, EXPRESSEDcoord: 12..48
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 6..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1313942..1315292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5373.t1Gchil5373.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1313942..1315292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5373.t1 ID=Gchil5373.t1|Name=Gchil5373.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=418bp
MGKIADPSLRLQCVHCHSTETPLWRAGPDGPKTLCNACGVRYKKGKLLLF
KDDHGNLTAVQRRDAVPFHIPPPSSKKASRKLASPVSQPSSPDLSAKRSA
IRKVPSEGAIAPPLGKKPRSRSRRANAGQLPGRYATKTLPDTMPLHYRSP
TSSPTVSPPTAPNRSPTHENRVPLLNFQRLYNVNEPPLSKLIDAHDESMF
PDMASLGLDCGPRANNNAVVLPMPVHASCVEQFSFAFSGCGNSLNIDAPD
RREALRGLLSDRTRKVSRTYEATVAAVARLCEQRYRNAKAKNMDAKLSAV
DDCRNFVRAFAHEQSCGYGLDDDGLCSVEQVAHMMCSSNSVGMMLPEKTA
HCNAVNYLKALVDSSELDGFAETCMVELLAEDVIAVLAQQGHAQFGKDAG
CRRGEAALRANAVATRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000679Znf_GATA
IPR013088Znf_NHR/GATA