Gchil5369.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5369.t1
Unique NameGchil5369.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length367
Homology
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BLAST of Gchil5369.t1 vs. uniprot
Match: A0A2V3J659_9FLOR (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J659_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 6.050e-40
Identity = 264/323 (81.73%), Postives = 279/323 (86.38%), Query Frame = 0 
Query:   35 DESYEEWIDRTNEPLHFIGNGYELTQTLTNLYLTNNRIPVIEHLEKCINLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEIPPTTFATNKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIKVIRGLCGMPKLSMLELGDNRIRIIENLDKXXXXXXXXXXXXXXXXXXXXXXXXXLKRLSLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELALLEGCEELETVYLEFNPLASDPQYRRKALNILPSSLEQLDALLVSDVYKELAEQ 357
            DE YEEW+D TNEPL FIGNGYELT TLTNLYLTNNRI VIE+LE+C+ LRE XXXXXXXXXXXXXXXXXXXXXXXXXXX I+EIPP +F +NKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    I GL GMPKL MLELGD           XXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +LL  CE+LETVYLEFNPLASDP Y++KAL+ILP SLEQLDAL+VSDV +E+AEQ
Sbjct:  100 DEPYEEWLDHTNEPLQFIGNGYELTSTLTNLYLTNNRISVIENLERCVCLRELXXXXXXXXXXXXXXXXXXXXXXXXXXXQISEIPPNSFESNKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGLHGMPKLVMLELGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLLRNCEDLETVYLEFNPLASDPNYKKKALDILPPSLEQLDALMVSDVRREIAEQ 422
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BLAST of Gchil5369.t1 vs. uniprot
Match: R7QF17_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF17_CHOCR)

HSP 1 Score: 131 bits (329), Expect = 8.480e-31
Identity = 193/319 (60.50%), Postives = 207/319 (64.89%), Query Frame = 0 
Query:   39 EEWIDRTNEPLHFIGNGYELTQTLTNLYLTNNRIPVIEHLEKCINLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEIPPTTFATNKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIKVIRGLCGMPKLSMLELGDNRIRIIENLDKXXXXXXXXXXXXXXXXXXXXXXXXXLKRLSLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELALLEGCEELETVYLEFNPLASDPQYRRKALNILPSSLEQLDALLVSDVYKELAEQ 357
            EEWIDRTNE L  IGNGYELT TL +LYLTNNRI  IE L  C+ LRE               XXXXXXXX      I  IP   F  N +L+                               KI+++  L  MPKL MLELGDNR+R+IENLD XXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +EL  L     LETVYLE NPLA DPQY+ KAL ILP+SLEQLDALLV D  K++A Q
Sbjct:    8 EEWIDRTNEALGEIGNGYELTPTLQHLYLTNNRISKIEKLSPCLALRELVLRQNSIKVIEGIDXXXXXXXXDLYMNQIDHIPSDGFKKNSELKRLDLSFNDIRELKGFPSNNLPNLEELYLIGNKIRIVSDLQSMPKLIMLELGDNRLRVIENLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFWINGNKLSSFDELNSLRSATRLETVYLEANPLAKDPQYQAKALEILPTSLEQLDALLVDDARKQIAAQ 326
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BLAST of Gchil5369.t1 vs. uniprot
Match: A0A7S1TBP1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBP1_9RHOD)

HSP 1 Score: 77.4 bits (189), Expect = 2.770e-12
Identity = 176/304 (57.89%), Postives = 204/304 (67.11%), Query Frame = 0 
Query:   41 WIDRTNEPLHFIGNGYELTQTLTNLYLTNNRIPVIEHLEKCINLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEIPPTTFATNKKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIKVIRGLCGMPKLSMLELGDNRIRIIENLDKXXXXXXXXXXXXXXXXXXXXXXXXXLKRLSLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELALLEGCEELETVYLEFNPLASDPQYRRKALNILPSSLEQLDA 344
            ++DR +EP   IG GYE+++    + LTNNR+  I+ L  C++L++           XXXXXXXXXXXX      ITE+  T+ A  +KL                                KI+VI+GL G+  L++LELGDNRIR I+NLD   XXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L LL+    L+T+YLE NPLA    Y +K + ILPSSL QL+A
Sbjct:    6 YVDRAHEPNGEIGFGYEISEEAREIDLTNNRLTNIQGLNHCLHLQKLVLRQNQIGVVXXXXXXXXXXXXDLYMNKITELSSTSLANKRKLLRLDLSFNDLRDLANFPVNQLPALEELYLISNKIRVIQGLAGLKSLTLLELGDNRIREIQNLDSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLELLQNATRLQTIYLEGNPLAGQAGYEQKVIQILPSSLSQLNA 309
The following BLAST results are available for this feature:
BLAST of Gchil5369.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J659_9FLOR6.050e-4081.73Protein phosphatase 1 regulatory subunit 7 n=1 Tax... [more]
R7QF17_CHOCR8.480e-3160.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TBP1_9RHOD2.770e-1257.89Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 283..304
e-value: 2.7
score: 17.0
coord: 81..102
e-value: 4.9
score: 16.1
coord: 127..148
e-value: 0.018
score: 24.2
coord: 239..260
e-value: 26.0
score: 12.1
coord: 59..80
e-value: 10.0
score: 15.1
coord: 261..282
e-value: 0.0013
score: 28.0
coord: 151..172
e-value: 0.27
score: 20.3
coord: 103..124
e-value: 340.0
score: 3.1
coord: 195..216
e-value: 1.2E-4
score: 31.5
coord: 217..238
e-value: 4.1E-5
score: 33.0
coord: 173..194
e-value: 0.0018
score: 27.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..30
NoneNo IPR availablePANTHERPTHR18849LEUCINE RICH REPEAT PROTEINcoord: 25..345
NoneNo IPR availablePANTHERPTHR18849:SF11PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT PPRAcoord: 25..345
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 42..343
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 128..150
e-value: 140.0
score: 4.0
coord: 261..282
e-value: 31.0
score: 9.2
coord: 103..126
e-value: 0.0025
score: 27.0
coord: 151..173
e-value: 12.0
score: 12.6
coord: 217..238
e-value: 53.0
score: 7.3
coord: 195..216
e-value: 140.0
score: 3.8
coord: 239..260
e-value: 180.0
score: 2.9
coord: 283..306
e-value: 80.0
score: 5.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 228..358
e-value: 3.1E-27
score: 96.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 14..227
e-value: 1.5E-39
score: 137.1
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 196..237
e-value: 3.5E-7
score: 30.4
coord: 242..279
e-value: 5.3E-7
score: 29.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 105..164
e-value: 3.2E-11
score: 42.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 263..284
score: 9.167388
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 241..262
score: 7.018892
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 83..104
score: 8.274106
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 153..174
score: 7.919874
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 129..150
score: 9.074979
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 197..218
score: 9.506219
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 219..240
score: 8.813155
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 175..196
score: 8.104691
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 105..126
score: 7.681152
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 61..82
score: 7.912173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1296491..1297751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5369.t1Gchil5369.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1296491..1297751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5369.t1 ID=Gchil5369.t1|Name=Gchil5369.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=367bp
MEEGDSNFPSESAKEQPLSVKTDTQASSSKMEMVDESYEEWIDRTNEPLH
FIGNGYELTQTLTNLYLTNNRIPVIEHLEKCINLRELVLRQNAIQKVEGL
ENLVSLSELDLYMNQITEIPPTTFATNKKLQKLDLSFNQLRDISNLPCAN
LANLEELYLISNKIKVIRGLCGMPKLSMLELGDNRIRIIENLDKLKSLEG
LWLGRNKITKIENLSSLKNLKRLSLQSNRIEAVENLEHLTLLEEVYLSHN
GLKSMKGIKNLKNLRVLDLGSNFIENIEEVECLKRLKEFWVNGNKLGSLE
ELALLEGCEELETVYLEFNPLASDPQYRRKALNILPSSLEQLDALLVSDV
YKELAEQESLQEIPNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR025875Leu-rich_rpt_4
IPR001611Leu-rich_rpt