Gchil4564.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4564.t1
Unique NameGchil4564.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length813
Homology
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A2V3J4H1_9FLOR (Myb-like protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4H1_9FLOR)

HSP 1 Score: 308 bits (790), Expect = 6.450e-89
Identity = 270/667 (40.48%), Postives = 352/667 (52.77%), Query Frame = 0
Query:    1 MADRNAEPSSTSAPDAPSPISKNEAKDEPQYQDASGESSQNNTSQVRISVLEAIANHQKQRISELERTLEKKRATIQRLSATPPLPHPTIPMVPAAAMXXXXXXXTSAQVPPAPSSS---PQVXXXXTSGGATVSSQAPTPSASQPQPSASTGATNHVMTAPMLGFPP-HSHVPP-YPFMFPPPDPCFAAQYMGVMPPAVLHPAQALNAQLPSQTNPRDKGNDSQEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRSDMRHGRVSKADPTDSVAEDAAAAVKAAAAAAICGKVPGTTSAAVKDSDSAGTPAGPSSSSSGKQFHSSHQHSQGASSGDGSISVNTASVQHADTNG----TKNRSAAMAAIAAEAKALGHGVLPLEAINISSHSYQIASQPTMVNKNTGSVEDEKESKNSRHTRDVDQTATRIGCEHSASMDQKGYISKSKQKQYECPETTETSRHEIA----DLPTAGESMNNNTRKTCTETSLQGDNGGVGVGKETN-----KADLLPKEAMDNNTETEEDIVSTGRCCKDVAKTGQDPLLSRMTEAGNKQDDSEKLTAGSVVHTKLTN-TTAKRVNIVEGMASETDGGMSAVKLEPERIGSCTNLGEKSNARAVSNTVGNEGSGGT 648
            MADR  + +  SA D  S I  +E K+EP  Q    E     TSQVR SVLE IA HQ +RI+ELERTLEKKRATI+RLSA PPLPHP IPMVP    XXXX   T  Q   A ++S   PQ  XXX        S  P  S  QPQ   + GA N  M APM+GFPP   H+   YP+M                 PAVLHP Q   ++ P Q   +DK ND  E+KQSRYWTPDEH+RFLAG+KACGPKNYLQISEYVGTRNAKQVRTHAQK+QKR ERE+AK R+DMRHGR ++  P  SV   AA AV                   VKDSDS GT AGPSS SSGKQ HSS+  SQGASS +GS+S NTA+ ++A+ +G        +AA+AA+AAEA ALG G LP  A+ ++   +    +    +    S+E E+    +      +     + C++S             Q+  ECP+  +++   +A     + T+G  ++  + + CT+ S    NG      +TN     +      E    + + EE +    +  +   K G+        EA   +D ++++  G   + K    TT      VEG    T    +  K EP+ + + TN G +S     S + G  G GG+
Sbjct:    1 MADREGDQNDVSAQDCSSSIPNHEPKEEPCEQPPPAEPLPRATSQVRNSVLEEIAAHQAKRITELERTLEKKRATIKRLSAAPPLPHPAIPMVPPTXXXXXXVS-TGTQNGSAQTASVGAPQASXXXXXXXXXXXSGLPPHS--QPQSLPTGGAHNPAMAAPMVGFPPPQPHLAAGYPYMXXXXXXXXXXXXXXXXXPAVLHPLQPPQSRTPRQGAQKDKTNDGSERKQSRYWTPDEHQRFLAGVKACGPKNYLQISEYVGTRNAKQVRTHAQKFQKRREREEAKLRNDMRHGR-TEVSPMASVGA-AAKAVXXXXXXXXXXXXXXXXPPQVKDSDSVGTQAGPSSCSSGKQCHSSNHQSQGASSAEGSVSTNTAAERNAENSGEGHPNSTSAAAVAAVAAEAVALGRGALPSGALQMAPKVFLGVGEKVQEDTADKSIEAERPKTEAVEVHSNEAETRTLTCDNSG------------QRTDECPQANKSATEGMAVSLGRIQTSGTRVDGVSSQACTDASTV-QNGLKQKDSDTNVHGGDEEQCSAAEHECRSDQNEETLPENAKHMRVSRKEGKPCNADGKDEAVATKDQTKEVRRGDGENGKQGGATTVSAQKQVEGTVHTT----ALPKSEPKCVDALTNCGARSEG---SKSGGQRGEGGS 642          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A7S1TD26_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD26_9RHOD)

HSP 1 Score: 90.1 bits (222), Expect = 3.570e-15
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 0
Query:  220 QEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRR 282
            Q+QKQ+RYWTP+EHERFL G+K  G KNY+ IS+ V TR  KQVRTHAQK+QKRLERE +K+R
Sbjct:  243 QDQKQTRYWTPEEHERFLRGVKLYGDKNYIAISKIVVTRTPKQVRTHAQKFQKRLEREASKKR 305          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A2V3J5I5_9FLOR (Myb-like protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5I5_9FLOR)

HSP 1 Score: 80.1 bits (196), Expect = 1.830e-12
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0
Query:  225 SRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRR 282
            +RYWT  EH++FL  +K  GPKNY+ IS++VGTR  KQVRTHAQKYQ +LERE  KRR
Sbjct:  146 TRYWTAKEHQQFLYAVKLFGPKNYVAISQFVGTRTPKQVRTHAQKYQMKLEREAKKRR 203          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A7S1ESP6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESP6_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 2.310e-12
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 0
Query:  225 SRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKR 281
            +RYW+  EHERFL G++ CG KNY  ++  VGTRNA+QVRTHAQK++ RL RE A+R
Sbjct:   51 TRYWSRAEHERFLKGIETCGMKNYAAVAVIVGTRNAQQVRTHAQKFEMRLAREAARR 107          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A7S0BIZ1_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIZ1_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 4.350e-12
Identity = 37/56 (66.07%), Postives = 40/56 (71.43%), Query Frame = 0
Query:  226 RYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKR 281
            RYWT +EH +FL G K  GPKNY  IS  VGTR  KQVRTHAQKY+ RL RE A R
Sbjct:    6 RYWTEEEHRKFLEGRKLYGPKNYAAISAVVGTRTPKQVRTHAQKYEMRLVRESAMR 61          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A5J4Z933_PORPP (Myb-like protein I n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z933_PORPP)

HSP 1 Score: 79.3 bits (194), Expect = 1.810e-11
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 0
Query:  223 KQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKR 281
            KQ+RYWT  EH+RFL      G K Y+ I+EYVG+R+AKQVRTHAQKY KRLERE A+R
Sbjct:  425 KQTRYWTQAEHDRFLQACAKFGEKAYVSIAEYVGSRSAKQVRTHAQKYAKRLEREHARR 483          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A7S1XF31_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF31_9RHOD)

HSP 1 Score: 71.6 bits (174), Expect = 3.210e-11
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 0
Query:  224 QSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLERE 277
            QSRYWTP+EH+RF+  ++  GPK+   IS +VGTRN  QVRTHAQKY  RL++E
Sbjct:   70 QSRYWTPEEHQRFIEAIQKFGPKDVRAISNFVGTRNPTQVRTHAQKYFLRLQKE 123          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A7S1XF13_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF13_9RHOD)

HSP 1 Score: 76.6 bits (187), Expect = 6.830e-11
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0
Query:  225 SRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAK 280
            SRYWTP+EH RFL G++  GPK+   IS +VGTRNA QVRTHAQKY  RL RE+ K
Sbjct:  160 SRYWTPEEHRRFLEGLELFGPKDIKSISNHVGTRNATQVRTHAQKYYLRLMRENPK 215          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A7S0G1E3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1E3_9RHOD)

HSP 1 Score: 70.5 bits (171), Expect = 1.260e-10
Identity = 37/59 (62.71%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  225 SRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRS 283
            SRYWT +EHERFL G+K  G K    IS +V TRNA QVRTHAQKY  RL RE  K+ S
Sbjct:    7 SRYWTQEEHERFLEGLKLYGHKEIKAISRHVRTRNATQVRTHAQKYYLRLAREKNKKES 65          
BLAST of Gchil4564.t1 vs. uniprot
Match: A0A151Z6W5_9MYCE (Myb domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6W5_9MYCE)

HSP 1 Score: 76.3 bits (186), Expect = 1.300e-10
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  200 QALNAQLPSQTNPRDKGNDSQEQKQSRYWTPDEHERFLAGMKACGPKNYLQISEYVGTRNAKQVRTHAQKYQKRLERE 277
            +A+N  L SQ N  ++   ++++KQSRYWTP+EH RFL  +   G K+   I+ YV TRNA QVRTHAQKY  R++RE
Sbjct:   99 EAINT-LQSQINKYEQEKQAEKKKQSRYWTPEEHSRFLEALNKFGHKDVKSIANYVATRNATQVRTHAQKYFLRIDRE 175          
The following BLAST results are available for this feature:
BLAST of Gchil4564.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4H1_9FLOR6.450e-8940.48Myb-like protein I n=1 Tax=Gracilariopsis chorda T... [more]
A0A7S1TD26_9RHOD3.570e-1569.84Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A2V3J5I5_9FLOR1.830e-1265.52Myb-like protein I n=1 Tax=Gracilariopsis chorda T... [more]
A0A7S1ESP6_9RHOD2.310e-1261.40Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S0BIZ1_9RHOD4.350e-1266.07Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z933_PORPP1.810e-1166.10Myb-like protein I n=1 Tax=Porphyridium purpureum ... [more]
A0A7S1XF31_9RHOD3.210e-1161.11Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S1XF13_9RHOD6.830e-1166.07Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0G1E3_9RHOD1.260e-1062.71Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A151Z6W5_9MYCE1.300e-1051.28Myb domain-containing protein n=1 Tax=Tieghemostel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..280
NoneNo IPR availableCOILSCoilCoilcoord: 48..82
NoneNo IPR availableGENE3D1.10.10.60coord: 228..274
e-value: 2.8E-11
score: 45.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 753..796
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 655..737
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 797..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..652
NoneNo IPR availablePANTHERPTHR12802:SF137MYB-LIKE PROTEIN Icoord: 220..304
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 220..304
IPR001005SANT/Myb domainSMARTSM00717santcoord: 224..273
e-value: 3.2E-9
score: 46.6
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 228..270
e-value: 1.71653E-8
score: 49.111
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 227..270
e-value: 2.5E-9
score: 37.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 228..275
score: 16.150427
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 222..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:1153493..1155931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4564.t1Gchil4564.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004426_pilon 1153493..1155931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4564.t1 ID=Gchil4564.t1|Name=Gchil4564.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=813bp
MADRNAEPSSTSAPDAPSPISKNEAKDEPQYQDASGESSQNNTSQVRISV
LEAIANHQKQRISELERTLEKKRATIQRLSATPPLPHPTIPMVPAAAMPT
VPTIPTSAQVPPAPSSSPQVDPAPTSGGATVSSQAPTPSASQPQPSASTG
ATNHVMTAPMLGFPPHSHVPPYPFMFPPPDPCFAAQYMGVMPPAVLHPAQ
ALNAQLPSQTNPRDKGNDSQEQKQSRYWTPDEHERFLAGMKACGPKNYLQ
ISEYVGTRNAKQVRTHAQKYQKRLEREDAKRRSDMRHGRVSKADPTDSVA
EDAAAAVKAAAAAAICGKVPGTTSAAVKDSDSAGTPAGPSSSSSGKQFHS
SHQHSQGASSGDGSISVNTASVQHADTNGTKNRSAAMAAIAAEAKALGHG
VLPLEAINISSHSYQIASQPTMVNKNTGSVEDEKESKNSRHTRDVDQTAT
RIGCEHSASMDQKGYISKSKQKQYECPETTETSRHEIADLPTAGESMNNN
TRKTCTETSLQGDNGGVGVGKETNKADLLPKEAMDNNTETEEDIVSTGRC
CKDVAKTGQDPLLSRMTEAGNKQDDSEKLTAGSVVHTKLTNTTAKRVNIV
EGMASETDGGMSAVKLEPERIGSCTNLGEKSNARAVSNTVGNEGSGGTRP
AEVTSLDSVEERREGKSHEVAKVDAESKKLHQSQEEKDRAKKGGSTGEVK
RNSDDDRKQSVEKDARRRGHGAHEEGDFEDELKRLATGDEGGTALEVDGN
HNVCGADNKKRVRDAEETGMHKRARKDDGVGRKVESASDRDGGTRRPSET
NGGTSTAATKLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf