Gchil4504.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4504.t1
Unique NameGchil4504.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length321
Homology
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A2V3J7M7_9FLOR (Homocysteine S-methyltransferase 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7M7_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 1.540e-91
Identity = 138/246 (56.10%), Postives = 176/246 (71.54%), Query Frame = 0
Query:    2 INKWYQWLDSEPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVKTTLVHCAKSNLVGIG 247
            ++ WYQWLD+  G+V++DGGLG +L+ERGN L DSRLW GKLL+T+P +L++VAK+WL  GADII+TATYQ +TK +Q EF  S +EA +   LS  LLDD R+ FW  L  +QKQ+RRYP IAVSCGPY A+LP  +EY+G Y   +  +I+ FH +RL++LR +  +   +    NI+CFETIGN  EA +I Q MG   F HIPYWISFQCRDA HI+  D LS  VKT L  C K+NLV IG
Sbjct:    1 MDDWYQWLDALDGAVVIDGGLGCLLEERGNKLHDSRLWGGKLLVTDPTQLRQVAKQWLQAGADIITTATYQASTKQIQTEFGYSSEEAERIMVLSGDLLDDERKTFWDSLTSQQKQARRYPAIAVSCGPYIAILPEGNEYTGLYPTTSPNEIQSFHTERLQTLRRLFEKDFASQR--NILCFETIGNGTEASLIVQTMGTLAFCHIPYWISFQCRDAEHIANGDPLSLVVKTILHQCEKANLVAIG 244          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A123THY8_STRSU (Homocysteine methyltransferase n=47 Tax=Streptococcus suis TaxID=1307 RepID=A0A123THY8_STRSU)

HSP 1 Score: 132 bits (333), Expect = 8.970e-33
Identity = 77/207 (37.20%), Postives = 119/207 (57.49%), Query Frame = 0
Query:   16 VILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHIS 222
            VIL G LG  L+ RG+D+   +LWS K LL NP  +K++ K+++  GAD+++T+TYQ   + L  E  LS  EA +  RL+  L  +AR + W +L E +K  R YP+I+   GPY+A L N +EY+G Y  ++ ++++DFH  R+  L     E         ++  ETI N  EA  + +++ AE+F     +ISF  +D   IS
Sbjct:   14 VILHGALGTELEFRGHDV-SGKLWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATFEGLA-EAGLSQVEAEELIRLTVDLAKEARDEVWAELSETEKAQRTYPLISGDVGPYAAYLANGAEYTGDYGNISLSELKDFHRRRIELLLEQGAE---------LLALETIPNVLEAQALVELL-AEDFPEAEAYISFTSQDGQSIS 208          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A662E2C1_9BACT (Homocysteine S-methyltransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A662E2C1_9BACT)

HSP 1 Score: 130 bits (328), Expect = 4.890e-32
Identity = 82/222 (36.94%), Postives = 124/222 (55.86%), Query Frame = 0
Query:   12 EPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVKT 233
            + G VILDGGL   L+ERG++L D  LWS +LL+  P  + +V  ++L  GAD I+T++YQ + +       L   + +K  RLS TL  +AR  FW + PE  +Q R  P++A S GPY A L + SEY+G Y  +    + +FH DR + L          S P +++  ET+ +  EA ++ Q++  +E      W+SF CRD LH+S      +AV+T
Sbjct:   13 KQGRVILDGGLATALEERGHNL-DDPLWSARLLIEKPESIHQVHVDYLKAGADCITTSSYQASLQGFSAR-GLDEADGHKLLRLSTTLAIEARDSFWSR-PEN-RQGRLCPLVAASIGPYGAYLTDGSEYNGAY-SIDDDSLYEFHRDRWQVLA---------SSPADLLACETLPSLREARVLLQLL--QETPGRWAWVSFSCRDGLHLSDGTPFVDAVQT 218          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A382GQF2_9ZZZZ (Hcy-binding domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382GQF2_9ZZZZ)

HSP 1 Score: 129 bits (323), Expect = 7.450e-32
Identity = 83/236 (35.17%), Postives = 129/236 (54.66%), Query Frame = 0
Query:   12 EPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVKTTLVHCAKSNLVGIG 247
            + G+V+LDGGL  +L+ RG+ L D  LWS K+L+ +P+E++   + +L  GAD ++TATYQ + +       L P + +K   LS TL  DA  +F    P  +   R  P++  S GPY A L + SEY G+Y GV++  +  FH  R          TC  +   +++ FETI +  EA ++  ++G      +  W+SF CRD  H+S    +  AV+  L + A+ NLVG+G
Sbjct:   19 QQGAVVLDGGLATLLEARGHKL-DPHLWSAKMLIDSPDEIRVAHRLFLDAGADCVTTATYQASYEGFA-RLGLGPSDVDKLLILSVTLAQDAVNEFQSDAP--RVNHRPSPLVGASIGPYGAFLADGSEYDGRY-GVSSEGLTHFHDRRF---------TCLATAGVDLMAFETIPSLNEARVLLDLLGKSA--ELWGWMSFSCRDGGHLSDGTSIETAVE--LCNSAE-NLVGVG 235          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A5B8W4X3_9SPHI (Homocysteine S-methyltransferase n=1 Tax=Mucilaginibacter ginsenosidivorax TaxID=862126 RepID=A0A5B8W4X3_9SPHI)

HSP 1 Score: 129 bits (323), Expect = 2.190e-31
Identity = 83/219 (37.90%), Postives = 129/219 (58.90%), Query Frame = 0
Query:   14 GSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVK 232
            G V+LDG +   L+ RG +L  S LWS KLL  +P  +K+V  ++L  GAD+I+TA+YQ + +    +   + DEA    +LS  L  +AR +F K+ P ++K     P++A S GPY A L + SEY G Y GV+  D++ FH  R++    V++ET  N+D   ++  ETI    EAV + +++   EF  +  WISF C+DA+ +S  +  +EA+K
Sbjct:   13 GFVVLDGAMATELEARGANLNHS-LWSAKLLNEDPELIKQVHYDYLVAGADVITTASYQASFEGFA-KHGYTHDEAIALMQLSVQLAFEARDEFMKEFPHREK-----PIVAASVGPYGASLADGSEYRGNY-GVSIQDLKTFHRRRMQ----VLIET--NAD---VLACETIPCIDEAVALLELLT--EFPGVQAWISFSCKDAVRLSSGEDFAEALK 212          
BLAST of Gchil4504.t1 vs. uniprot
Match: UPI00041EED13 (homocysteine S-methyltransferase n=1 Tax=Streptococcus porci TaxID=502567 RepID=UPI00041EED13)

HSP 1 Score: 129 bits (323), Expect = 2.540e-31
Identity = 78/217 (35.94%), Postives = 126/217 (58.06%), Query Frame = 0
Query:    6 YQWLDSEPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHIS 222
            ++ L S    +IL G LG  L+ RG+D+   +LWS K LL NP  ++++ K+++  GAD+I+T+TYQ     L  E  LS  EA     L+  L  +AR++ W +L +++K SR YP+I+   GPY+A L + SEY+G Y  ++  D+++FH  R+  L    LE  +      ++  ETI N  EA  + +++ AEEF ++  ++SF  +D   IS
Sbjct:    4 FKELLSTQEYIILHGALGTELEFRGHDV-SGKLWSAKYLLENPRLIRDIHKDYIRAGADLITTSTYQATFPGLA-EVGLSEKEAEDLICLTVDLAKEAREEVWAELSDQEKASRTYPLISGDVGPYAAYLADGSEYTGDYGDISLIDLKEFHRRRIELL----LEQGSE-----LLALETIPNFLEAQALVELL-AEEFPNVEAYMSFTSQDGQSIS 208          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A3B0UZ53_9ZZZZ (Homocysteine S-methyltransferase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0UZ53_9ZZZZ)

HSP 1 Score: 129 bits (323), Expect = 2.600e-31
Identity = 93/247 (37.65%), Postives = 135/247 (54.66%), Query Frame = 0
Query:    1 MINKWYQWLDSEPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVKTTLVHCAKSNLVGIG 247
            M+N    +LD +    ILDGGL   L+ RG+DL D+ LWS +LLL  P  +++V  ++L  GAD + +A+YQ +   LQ    LS  EA    +LS  L  DAR+ FW    E  ++ R  P++A S GPY A L N +EY+G Y G+  A++  +H  R + L         NS    + C ETI +  EA  + Q++   +   +P WISF CRD +HIS    L+E V+  L++    NLV +G
Sbjct:    1 MLNPIRPFLDYQ-NLFILDGGLATELEARGHDLNDA-LWSARLLLEQPEAIRQVHSDYLWAGADCVISASYQASLPGLQAR-GLSQKEAAALIQLSVQLAIDAREQFWAI--ETNRRGRLRPLVAASVGPYGAYLANGAEYTGNY-GLDEAELLAWHRSRWQIL--------ANSGADLLAC-ETIPSLPEARALRQLLLETQ---MPAWISFACRDGVHISDGTPLAECVR--LLNDVP-NLVAVG 226          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A257CEB8_9BURK (Homocysteine S-methyltransferase n=1 Tax=Burkholderiales bacterium PBB6 TaxID=2015568 RepID=A0A257CEB8_9BURK)

HSP 1 Score: 129 bits (323), Expect = 2.710e-31
Identity = 87/248 (35.08%), Postives = 128/248 (51.61%), Query Frame = 0
Query:    3 NKWYQWLDSEPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVKTTLVHCAKSNLVGIGSFA 250
            N    WL   P  +ILDG L   L+ RG DL+D  LWS +LL+  P+ +++V  ++   GAD+ +TA+YQ +         L+ ++A    RLS  L  +AR  FW Q P   +  R +P++A S GPY AVL + SEY G Y G++ A ++DFH  RL+ L          +   +++  ET+    EA  +A+++ AE F     WIS  CRDA H SC     EA+   L        +G+   A
Sbjct:    5 NPLAAWLARSP-RLILDGALATELERRGADLKDP-LWSARLLMEQPDLIRQVHLDYYLAGADVATTASYQASFSGFAQR-GLNAEQAADLMRLSVQLASEARDQFW-QTPGA-RDGRHFPLVAASVGPYGAVLADGSEYRGHY-GLSEAQLQDFHRPRLQVLA---------NAGADLLAVETVPCALEARAVARLLAAE-FPGTSAWISLSCRDAAH-SCEGDSVEAIAAELDGLPSVAAIGVNCTA 235          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A1G6A7H1_9STRE (Homocysteine S-methyltransferase n=2 Tax=Streptococcus henryi TaxID=439219 RepID=A0A1G6A7H1_9STRE)

HSP 1 Score: 128 bits (322), Expect = 3.630e-31
Identity = 74/227 (32.60%), Postives = 124/227 (54.63%), Query Frame = 0
Query:    6 YQWLDSEPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVK 232
            ++ L +    +IL G LG  L+ RG D+    LWS K L+ NP  +K++ K++L  G+DI++T++YQ     L  +  +  +EA +  +L+  L  +AR + W+ L + +K +R YP+I+   GPY+A L + SEY+G Y G++  ++RDFH  R++ L     E         ++  ETI N  E   + +++  EEF  +  +ISF  +D   IS    + E  K
Sbjct:    4 FKELLASQNQLILHGALGTELESRGYDV-SGNLWSAKYLIENPQAIKDIHKDYLLAGSDILTTSSYQATIPGLA-QVGIDENEAERLIKLTVQLAIEARDEVWETLTDDEKNARPYPLISGDVGPYAAFLADGSEYTGDYKGISKKELRDFHRPRIQWLLEAGAE---------MLALETIPNAVETQALLELLE-EEFPAVEAYISFTSQDGSTISDGTAVEEVAK 218          
BLAST of Gchil4504.t1 vs. uniprot
Match: A0A0N0DMR6_STRSU (Homocysteine methyltransferase n=117 Tax=Streptococcus TaxID=1301 RepID=A0A0N0DMR6_STRSU)

HSP 1 Score: 128 bits (321), Expect = 4.960e-31
Identity = 84/244 (34.43%), Postives = 134/244 (54.92%), Query Frame = 0
Query:   16 VILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNELKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLLDDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTTADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMGAEEFYHIPYWISFQCRDALHISCRDLLSEAVKTTLVHCAKSNL-VGIGSFA-QLLPIFL 257
            +IL G LG  L+ RG D+   +LWS K LL NP  +K++ K+++  GAD+++T+TYQ   + L  E  LS  EA     L+  L  +AR + W +L E +K  R YP+I+   GPY+A L N +EY+G Y  ++ ++++DFH  R+  L     E         ++  ETI N  EA  + +++ AE+F     +ISF  +D   IS  + + +  +  L++ ++  L VG+   A  L P FL
Sbjct:   14 IILHGALGTELEFRGYDV-SGKLWSAKYLLENPQYIKDIHKDYIRAGADLVTTSTYQATFEGLA-EVGLSQAEAEDLICLTVDLAKEARDEVWAELSEAEKAQRTYPLISGDVGPYAAYLANGAEYTGDYGNISLSELKDFHRRRIELLLEQGAE---------LLGLETIPNVLEAQALVELL-AEDFPEAEAYISFTSQDGQSISDGNSIEKIAE--LINSSEQILAVGLNCTAPSLYPAFL 243          
The following BLAST results are available for this feature:
BLAST of Gchil4504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7M7_9FLOR1.540e-9156.10Homocysteine S-methyltransferase 2 n=1 Tax=Gracila... [more]
A0A123THY8_STRSU8.970e-3337.20Homocysteine methyltransferase n=47 Tax=Streptococ... [more]
A0A662E2C1_9BACT4.890e-3236.94Homocysteine S-methyltransferase n=1 Tax=Acidobact... [more]
A0A382GQF2_9ZZZZ7.450e-3235.17Hcy-binding domain-containing protein (Fragment) n... [more]
A0A5B8W4X3_9SPHI2.190e-3137.90Homocysteine S-methyltransferase n=1 Tax=Mucilagin... [more]
UPI00041EED132.540e-3135.94homocysteine S-methyltransferase n=1 Tax=Streptoco... [more]
A0A3B0UZ53_9ZZZZ2.600e-3137.65Homocysteine S-methyltransferase n=1 Tax=hydrother... [more]
A0A257CEB8_9BURK2.710e-3135.08Homocysteine S-methyltransferase n=1 Tax=Burkholde... [more]
A0A1G6A7H1_9STRE3.630e-3132.60Homocysteine S-methyltransferase n=2 Tax=Streptoco... [more]
A0A0N0DMR6_STRSU4.960e-3134.43Homocysteine methyltransferase n=117 Tax=Streptoco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003726Homocysteine-binding domainPFAMPF02574S-methyl_transcoord: 16..232
e-value: 8.3E-33
score: 114.4
IPR036589Homocysteine-binding domain superfamilyGENE3D3.20.20.330coord: 7..259
e-value: 3.3E-46
score: 160.0
IPR036589Homocysteine-binding domain superfamilySUPERFAMILY82282Homocysteine S-methyltransferasecoord: 12..224
NoneNo IPR availablePANTHERPTHR46015ZGC:172121coord: 13..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..271
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:573999..575776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4504.t1Gchil4504.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004426_pilon 573999..575776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4504.t1 ID=Gchil4504.t1|Name=Gchil4504.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=321bp
MINKWYQWLDSEPGSVILDGGLGFILKERGNDLRDSRLWSGKLLLTNPNE
LKEVAKEWLACGADIISTATYQVNTKLLQDEFNLSPDEANKTWRLSWTLL
DDARQDFWKQLPEKQKQSRRYPVIAVSCGPYSAVLPNVSEYSGKYHGVTT
ADIRDFHLDRLRSLRAVVLETCTNSDPPNIVCFETIGNTAEAVIIAQIMG
AEEFYHIPYWISFQCRDALHISCRDLLSEAVKTTLVHCAKSNLVGIGSFA
QLLPIFLLTIHGFIEVLLSALRASLQILIPRKTPEVEITERTTTSLRRAS
TSATDKELALPENIQDSLIH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003726HCY_dom
IPR036589HCY_dom_sf