Gchil4455.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4455.t1
Unique NameGchil4455.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length136
Homology
[Close]
BLAST of Gchil4455.t1 vs. uniprot
Match: A0A2V3IXJ3_9FLOR (C2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ3_9FLOR)

HSP 1 Score: 215 bits (548), Expect = 5.110e-70
Identity = 104/134 (77.61%), Postives = 115/134 (85.82%), Query Frame = 0 
Query:    1 MVQVEGKISIWIKSGSFNHGSDLYIKVFVDDNDIWSTDEKDGFSPDWDSTVEKHIKGDYEKIVLKLMDEDTCDRDDVIGTVEIPIADLLDDGINDD-VQICSENGDSVGTVAVNINFEEGDVNMFDLLGSMLHK 133
            M +VEGKISIWIKSGSFNHGSDLYI+V +DDN IW T+EKDGF+PD+DSTV KHIKGDYEKIVL+LMDEDTC RDDVI T E PIADLLDDGINDD V +C  +G+ VGT+ VNINFE GDVN F L GSMLHK
Sbjct:    1 MAEVEGKISIWIKSGSFNHGSDLYIQVLIDDNSIWKTEEKDGFTPDFDSTVVKHIKGDYEKIVLRLMDEDTCTRDDVIATAEFPIADLLDDGINDDSVSMCDADGNEVGTLGVNINFEAGDVNAFQLFGSMLHK 134
[Close]
BLAST of Gchil4455.t1 vs. uniprot
Match: R7QFN6_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN6_CHOCR)

HSP 1 Score: 196 bits (497), Expect = 2.480e-62
Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0 
Query:    4 VEGKISIWIKSGSFNHGSDLYIKVFVDDNDIWSTDEKDGFSPDWDSTVEKHIKGDYEKIVLKLMDEDTCDRDDVIGTVEIPIADLLDDGINDDVQICSENGDSVGTVAVNINFEEGDVNMFDLLGSMLHKDD 135
            +EGK+SIWIK GSF+H SDLY+KV +DD ++W TDEKDG SPDWDSTV KHIKG+YEKI+LKLMDEDT  RDDVIGTVE PI D +  GIN    +     +SVGTV VNINFEEGDV+MFDLLGSMLHKDD
Sbjct:    1 MEGKLSIWIKGGSFSHSSDLYMKVLIDDKEVWKTDEKDGSSPDWDSTVVKHIKGEYEKIILKLMDEDTFSRDDVIGTVEFPICDTVS-GINGSFDVKDAEDNSVGTVDVNINFEEGDVSMFDLLGSMLHKDD 131
[Close]
BLAST of Gchil4455.t1 vs. uniprot
Match: A0A1X6PG20_PORUM (C2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG20_PORUM)

HSP 1 Score: 93.2 bits (230), Expect = 1.040e-21
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 0 
Query:    1 MVQVEGKISIWIKSGSFNHGSDLYIKVFVDDNDIWSTDEKDGFSPDWDSTVEKHIKGDYEKIVLKLMDEDTCDRDDVIGTVEIPIADLLDDGINDDVQICSENGDSVGTVAVNINFEEGDVNMFDLLGSMLHKDD 135
            MVQ+EGK++  + SGS   G D Y  V +    +  T++ D  +P+W+ T E HIKGDYE++ + + ++D    DD +G+V IP++ L    +N    + ++ G+  G +    +FE G+V++FD L   LH  D
Sbjct:    1 MVQMEGKLTAVLMSGSDLKGDDAYAIVKLGKKQVIKTNKDDSHNPEWNFTREVHIKGDYEEMTIAVYEDDDFSSDDFLGSVTIPVSRLSGGPVNGTFALQTKEGEPAGEIKAIFSFEAGEVSIFDQLKDKLHDSD 135
The following BLAST results are available for this feature:
BLAST of Gchil4455.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IXJ3_9FLOR5.110e-7077.61C2 domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QFN6_CHOCR2.480e-6271.97C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1X6PG20_PORUM1.040e-2134.81C2 domain-containing protein n=1 Tax=Porphyra umbi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 7..97
e-value: 0.0023
score: 27.2
IPR000008C2 domainPFAMPF00168C2coord: 19..91
e-value: 1.5E-10
score: 41.3
IPR000008C2 domainPROSITEPS50004C2coord: 1..98
score: 10.457201
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 10..118
e-value: 1.3E-12
score: 50.2
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 6..116
NoneNo IPR availableCDDcd00030C2coord: 12..97
e-value: 1.3166E-8
score: 47.4467

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:423238..424060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4455.t1Gchil4455.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004426_pilon 423238..424060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4455.t1 ID=Gchil4455.t1|Name=Gchil4455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=136bp
MVQVEGKISIWIKSGSFNHGSDLYIKVFVDDNDIWSTDEKDGFSPDWDST
VEKHIKGDYEKIVLKLMDEDTCDRDDVIGTVEIPIADLLDDGINDDVQIC
SENGDSVGTVAVNINFEEGDVNMFDLLGSMLHKDD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf