Gchil4426.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4426.t1
Unique NameGchil4426.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length201
Homology
BLAST of Gchil4426.t1 vs. uniprot
Match: A0A2V3IUH1_9FLOR (Polyketide_cyc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH1_9FLOR)

HSP 1 Score: 230 bits (587), Expect = 6.250e-74
Identity = 118/195 (60.51%), Postives = 146/195 (74.87%), Query Frame = 0
Query:    5 RNVAFITTPLPVTRRRNTLPAAPRTYIRLPPTFTTPRAEMVRVSVPLKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIRLSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENL-QPTATKMIMTVDYDIESLVAAIMRSSVVSNFVEGAIESDLSRFRSYALRKYRKAKMST 198
            RN AF  +  P   +     +A  T  R  P F+ P  +MVRVSVPLKIEAPN YC+ LF+DLSNMPEWSS LEAV RD++DP FS+W F+WNGIRL WRA+DV N   +  D P + W+SVSGLVHTG VQF  L Q  +T MI+TV YDI++L+A IM+SS+VSNFV+ AIE+DLS+FRSYALRKYR+AK+S+
Sbjct:    5 RNAAFAFSS-PFLPKATPFSSAHVTSTRAAPKFSAPTMQMVRVSVPLKIEAPNQYCYSLFADLSNMPEWSSTLEAVERDAQDPLFSDWKFSWNGIRLKWRAKDVLNDEQNHDDAPEVCWKSVSGLVHTGVVQFHPLEQDKSTTMILTVHYDIDNLLATIMQSSLVSNFVQSAIENDLSKFRSYALRKYRRAKISS 198          
BLAST of Gchil4426.t1 vs. uniprot
Match: UPI001E1E07DE (uncharacterized 17.2 kDa protein in melC2-rnhH intergenic region-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E07DE)

HSP 1 Score: 163 bits (413), Expect = 1.890e-47
Identity = 79/159 (49.69%), Postives = 106/159 (66.67%), Query Frame = 0
Query:   39 TPRAEMVRVSVPLKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIRLSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENLQPTATKMIMTVDYDIESLVAAIMRSSVVSNFVEGAIESDLSRFRSYALRKYRKAKMS 197
            T   + V+V VP+ +E P    F LF+DL +M +WSS L  V+RD+ D + S WNF WNG+RLSW ARD + +     ++  I W SV GL H G V F  L PTAT++ MTVDYD+ SL+A IM +  + NFVE AI++DL +FR+YALR  R+AKM+
Sbjct:   50 TATMKFVQVRVPVPVEVPREMAFGLFADLDSMSQWSSTLAKVSRDAHDHTLSHWNFEWNGVRLSWSARDKDRI-----ELERISWESVDGLTHKGRVDFVELGPTATELTMTVDYDVASLLAVIMETRFIQNFVESAIKADLEKFRTYALRMQRRAKMN 203          
BLAST of Gchil4426.t1 vs. uniprot
Match: UPI00168975C7 (SRPBCC family protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI00168975C7)

HSP 1 Score: 85.1 bits (209), Expect = 1.350e-17
Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   48 SVPLKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIRLSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENLQPTATKMIMTVDYDIESLVAAIMRSSVVSNFVEGAIESDLSRFRSYAL 188
            SV + ++ P    + L+SDL  MP W   +++VT   E+P  S W  A  G+  +W +R    +P        I+W SV GL + G ++F + + + T   +TV YD+ ++V   M +  +   VEG +++DL+RFR+YAL
Sbjct:    8 SVLVDVDVPVEMAWGLWSDLEQMPRWMKWIDSVTVLPENPELSRWKLATRGLEFTWLSRITNLVPEQ-----IIQWESVDGLPNRGAIRFYDRKGSTTVK-LTVSYDVPAIVKW-MDNLFLGRVVEGELQADLNRFRTYAL 141          
BLAST of Gchil4426.t1 vs. uniprot
Match: A0A6H2NQT1_9CYAN (Polyketide_cyc domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A6H2NQT1_9CYAN)

HSP 1 Score: 82.0 bits (201), Expect = 2.160e-16
Identity = 42/141 (29.79%), Postives = 77/141 (54.61%), Query Frame = 0
Query:   48 SVPLKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIRLSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENLQPTATKMIMTVDYDIESLVAAIMRSSVVSNFVEGAIESDLSRFRSYAL 188
            SV + ++ P    + L+SDL  MP W   +++V    ++P  SEW  A  G+  +WR++ + N+  H      I+W ++ GL + G ++F + +   + + +TV Y + ++V   M    +   VE  ++SDL+RFR YA+
Sbjct:    8 SVVVDVDIPVETSWALWSDLEQMPRWMKWIDSVRVPEDNPDLSEWKLASRGLEFTWRSK-ITNLVTHQ----IIQWEAIDGLPNRGAIRFYDRKEGKSTVKLTVSYAVPTIVKW-MDGLFLGRLVEATLQSDLNRFRDYAM 142          
BLAST of Gchil4426.t1 vs. uniprot
Match: A0A222XCU9_9CELL (Cyclase n=3 Tax=Cellulomonas TaxID=1707 RepID=A0A222XCU9_9CELL)

HSP 1 Score: 60.8 bits (146), Expect = 2.160e-8
Identity = 34/143 (23.78%), Postives = 71/143 (49.65%), Query Frame = 0
Query:   44 MVRVSVPLKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIRLSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENLQPTATKMIMTVDYDIESLVAAIMRSSVVSNFVEGAIESDLSRFRSY 186
            M  +   ++++ P S  +  ++   + PE+   +E V +   D + + W  +  G+   + A+ VE  P+       + W+S+ G  H G+V FE L PT T++ +   ++ E+LV    ++  V    +  +++DL RF+ +
Sbjct:    1 MATIDESVEVDVPISTAYNQWTQFEDFPEFMGGVEEVRQ--VDDTLTHWRTSIGGVEREFDAQIVEQTPD-----TRVAWQSIDGTTHVGQVTFEPLGPTQTRVRVQTAWEPETLVE---KAGAVVGADDRQVKADLKRFKEF 133          
BLAST of Gchil4426.t1 vs. uniprot
Match: A0A1A7C1M2_9BURK (Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Janthinobacterium psychrotolerans TaxID=1747903 RepID=A0A1A7C1M2_9BURK)

HSP 1 Score: 57.0 bits (136), Expect = 1.040e-6
Identity = 33/113 (29.20%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   47 VSVPLKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIRLSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENLQPTATKMIMTVDYDIESLV 159
            V   +++  P S  +  ++   + P++  ++  V R  +D     W     G    W A   E +P+       I WRSV+G+ + GEV+FE +  TAT++I+T+DY  E +V
Sbjct:   36 VEESIEVNLPVSTAYNQWTQFEDFPQFMESVHEV-RQLDDKRL-HWRADVAGKEKQWDAEITEQVPDKR-----IAWRSVNGVRNNGEVRFEKISDTATRIILTMDYQPEGMV 141          
BLAST of Gchil4426.t1 vs. uniprot
Match: A0A2A9EM24_9MICO (Polyketide cyclase/dehydrase/lipid transport protein n=1 Tax=Georgenia soli TaxID=638953 RepID=A0A2A9EM24_9MICO)

HSP 1 Score: 55.8 bits (133), Expect = 3.000e-6
Identity = 32/141 (22.70%), Postives = 72/141 (51.06%), Query Frame = 0
Query:   46 RVSVPLKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIRLSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENLQPTATKMIMTVDYDIESLVAAIMRSSVVSNFVEGAIESDLSRFRSY 186
            +V   ++++ P +  +  ++   + P +   +E VT+ ++  +  EW     G++ +W+AR VE +P+       + W +  G  + G V+F +L    T++ +T++++ E +V    ++      VE   ESDL +F+ +
Sbjct:    4 KVHKTVQVDVPITTVYNQWTQFEDFPHFMGGVEKVTQLTD--ASLEWVAQIAGVKRTWKARIVEQVPD-----TRVAWAASEGATNAGTVEFRDLGDGRTEVSLTLEFEPEGVVE---KAGDTLGIVERQAESDLKKFKEF 134          
The following BLAST results are available for this feature:
BLAST of Gchil4426.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IUH1_9FLOR6.250e-7460.51Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
UPI001E1E07DE1.890e-4749.69uncharacterized 17.2 kDa protein in melC2-rnhH int... [more]
UPI00168975C71.350e-1733.33SRPBCC family protein n=1 Tax=Pseudanabaena sp. FA... [more]
A0A6H2NQT1_9CYAN2.160e-1629.79Polyketide_cyc domain-containing protein n=2 Tax=P... [more]
A0A222XCU9_9CELL2.160e-823.78Cyclase n=3 Tax=Cellulomonas TaxID=1707 RepID=A0A2... [more]
A0A1A7C1M2_9BURK1.040e-629.20Polyketide cyclase / dehydrase and lipid transport... [more]
A0A2A9EM24_9MICO3.000e-622.70Polyketide cyclase/dehydrase/lipid transport prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 44..192
e-value: 4.3E-25
score: 90.2
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 44..185
e-value: 6.6E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR33824POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEINcoord: 34..194
NoneNo IPR availablePANTHERPTHR33824:SF7POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEINcoord: 34..194
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 44..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:262067..262669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4426.t1Gchil4426.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004426_pilon 262067..262669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4426.t1 ID=Gchil4426.t1|Name=Gchil4426.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=201bp
MPNRRNVAFITTPLPVTRRRNTLPAAPRTYIRLPPTFTTPRAEMVRVSVP
LKIEAPNSYCFELFSDLSNMPEWSSALEAVTRDSEDPSFSEWNFAWNGIR
LSWRARDVENMPNHSSDVPAIRWRSVSGLVHTGEVQFENLQPTATKMIMT
VDYDIESLVAAIMRSSVVSNFVEGAIESDLSRFRSYALRKYRKAKMSTGA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR019587Polyketide_cyclase/dehydratase